RNA–Protein interactions for RNA: ENST00000299440.5

RAG1-201, Transcript of recombination activating 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAG1, Length 6,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAG1-201ENST00000299440 NSFP46459 744 aaKnown RBP7.78□□□□□ -1.16
RAG1-201ENST00000299440 PPP2R3AQ06190 1150 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 PNOCQ13519 176 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 ZNF568Q3ZCX4 644 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 NAP1L3Q99457 506 aaPredicted RBP7.78□□□□□ -1.16
RAG1-201ENST00000299440 GPR108Q9NPR9 543 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 ANAPC4Q9UJX5 808 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 PIN4Q9Y237 131 aaKnown RBP7.78□□□□□ -1.16
RAG1-201ENST00000299440 GCC2Q8IWJ2 1684 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 CPDO75976 1380 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 PTK2Q05397 1052 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 CCDC6Q16204 474 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 GBP6Q6ZN66 633 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 CTAGE3PQ8IX95 158 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 PDCD6IPQ8WUM4 868 aaKnown RBP7.78□□□□□ -1.16
RAG1-201ENST00000299440 ALKBH8Q96BT7 664 aaKnown RBP7.78□□□□□ -1.16
RAG1-201ENST00000299440 TIGD1Q96MW7 591 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 F5H6K3 240 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 ALDH3A1P30838 453 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 CIITAP33076 1130 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 MCAMP43121 646 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 PTPN12Q05209 780 aaKnown RBP7.78□□□□□ -1.16
RAG1-201ENST00000299440 KLRC3Q07444 240 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 LRRC41Q15345 812 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 TYW1BQ6NUM6 668 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 DDX53Q86TM3 631 aaKnown RBP7.78□□□□□ -1.16
RAG1-201ENST00000299440 CCDC105Q8IYK2 499 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 DCLK2Q8N568 766 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 SPATA17Q96L03 361 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 CFAP43Q8NDM7 1665 aa7.78□□□□□ -1.16
RAG1-201ENST00000299440 CEP104O60308 925 aa7.77□□□□□ -1.16
RAG1-201ENST00000299440 HUS1O60921 280 aa7.77□□□□□ -1.16
RAG1-201ENST00000299440 CACNB2Q08289 660 aaPredicted RBP7.77□□□□□ -1.16
RAG1-201ENST00000299440 PRPSAP1Q14558 356 aa7.77□□□□□ -1.16
RAG1-201ENST00000299440 MAPK6Q16659 721 aa7.77□□□□□ -1.16
RAG1-201ENST00000299440 ZMYM1Q5SVZ6 1142 aa7.77□□□□□ -1.16
RAG1-201ENST00000299440 PHLDB2Q86SQ0 1253 aa7.77□□□□□ -1.16
RAG1-201ENST00000299440 MMTAG2Q9BU76 263 aaKnown RBP7.77□□□□□ -1.16
RAG1-201ENST00000299440 STMN4Q9H169 189 aaPredicted RBP7.77□□□□□ -1.16
RAG1-201ENST00000299440 ATP6V0A4Q9HBG4 840 aa7.77□□□□□ -1.16
RAG1-201ENST00000299440 PCDHA6Q9UN73 950 aa7.77□□□□□ -1.16
RAG1-201ENST00000299440 PCDHA8Q9Y5H6 950 aa7.77□□□□□ -1.16
RAG1-201ENST00000299440 NR2E3Q9Y5X4 410 aa7.77□□□□□ -1.16
RAG1-201ENST00000299440 CCDC26Q8TAB7 109 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 TARBP1Q13395 1621 aaKnown RBP7.77□□□□□ -1.17
RAG1-201ENST00000299440 H7C0C1 242 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 TADA2AO75478 443 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 ATP5OP48047 213 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 JAK3P52333 1124 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 USP17L6PQ6QN14 398 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 VPS52Q8N1B4 723 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 PIGOQ8TEQ8 1089 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 ZKSCAN4Q969J2 545 aaPredicted RBP7.77□□□□□ -1.17
RAG1-201ENST00000299440 SLTMQ9NWH9 1034 aaKnown RBP eCLIP7.77□□□□□ -1.17
RAG1-201ENST00000299440 GABBR1Q9UBS5 961 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 PLEKHG2Q9H7P9 1386 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 CPSF1Q10570 1443 aaKnown RBP7.77□□□□□ -1.17
RAG1-201ENST00000299440 SFI1A8K8P3 1242 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 C2CD2LO14523 706 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 PRRG1O14668 218 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 TGFB2P61812 414 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 RCSD1Q6JBY9 416 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 RUFY4Q6ZNE9 571 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 PSPC1Q8WXF1 523 aaKnown RBP7.77□□□□□ -1.17
RAG1-201ENST00000299440 CFAP57Q96MR6 1250 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 HERC5Q9UII4 1024 aaKnown RBP7.77□□□□□ -1.17
RAG1-201ENST00000299440 SLC4A7Q9Y6M7 1214 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 UTYO14607 1347 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 ABCC3O15438 1527 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 VPS41P49754 854 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 ADCY1Q08828 1119 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 AFAP1L2Q8N4X5 818 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 LARP4BQ92615 738 aaKnown RBP7.77□□□□□ -1.17
RAG1-201ENST00000299440 OSBP2Q969R2 916 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 CEP95Q96GE4 821 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 KATNAL1Q9BW62 490 aa7.77□□□□□ -1.17
RAG1-201ENST00000299440 RGL2O15211 777 aa7.76□□□□□ -1.17
RAG1-201ENST00000299440 MAP3K7O43318 606 aa7.76□□□□□ -1.17
RAG1-201ENST00000299440 COBLO75128 1261 aa7.76□□□□□ -1.17
RAG1-201ENST00000299440 RPS12P25398 132 aaKnown RBP7.76□□□□□ -1.17
RAG1-201ENST00000299440 ATICP31939 592 aa7.76□□□□□ -1.17
RAG1-201ENST00000299440 RGS2P41220 211 aa7.76□□□□□ -1.17
RAG1-201ENST00000299440 CYP27A1Q02318 531 aa7.76□□□□□ -1.17
RAG1-201ENST00000299440 ITPK1Q13572 414 aa7.76□□□□□ -1.17
RAG1-201ENST00000299440 RFX6Q8HWS3 928 aa7.76□□□□□ -1.17
RAG1-201ENST00000299440 HAUS1Q96CS2 278 aa7.76□□□□□ -1.17
RAG1-201ENST00000299440 DYRK4Q9NR20 520 aa7.76□□□□□ -1.17
RAG1-201ENST00000299440 DOLKQ9UPQ8 538 aa7.76□□□□□ -1.17
RAG1-201ENST00000299440 FARP1Q9Y4F1 1045 aaPredicted RBP7.76□□□□□ -1.17
RAG1-201ENST00000299440 SSH2Q76I76 1423 aa7.76□□□□□ -1.17
RAG1-201ENST00000299440 CAMSAP1Q5T5Y3 1602 aa7.76□□□□□ -1.17
RAG1-201ENST00000299440 KDM4FA0A1W2PPD8 638 aa7.76□□□□□ -1.17
RAG1-201ENST00000299440 GOLGA8CPA6NN73 597 aa7.76□□□□□ -1.17
RAG1-201ENST00000299440 H7C1W4 665 aa7.76□□□□□ -1.17
RAG1-201ENST00000299440 GCFC2P16383 781 aaKnown RBP7.76□□□□□ -1.17
RAG1-201ENST00000299440 MAGEA1P43355 309 aa7.76□□□□□ -1.17
RAG1-201ENST00000299440 SARNPP82979 210 aaKnown RBP7.76□□□□□ -1.17
RAG1-201ENST00000299440 PPP4R4Q6NUP7 873 aa7.76□□□□□ -1.17
RAG1-201ENST00000299440 DEFB128Q7Z7B8 93 aa7.76□□□□□ -1.17
RAG1-201ENST00000299440 IPO11Q9UI26 975 aaKnown RBP7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms