RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 KBTBD4Q9NVX7 518 aa12.53□□□□□ -0.4
TRUB1-201ENST00000298746 SEC63Q9UGP8 760 aaKnown RBP12.53□□□□□ -0.4
TRUB1-201ENST00000298746 ARHGAP23Q9P227 1491 aa12.52□□□□□ -0.4
TRUB1-201ENST00000298746 OPLAHO14841 1288 aa12.52□□□□□ -0.4
TRUB1-201ENST00000298746 DAPK3O43293 454 aa12.52□□□□□ -0.4
TRUB1-201ENST00000298746 MYL1P05976 194 aa12.52□□□□□ -0.4
TRUB1-201ENST00000298746 PPP2R2AP63151 447 aa12.52□□□□□ -0.4
TRUB1-201ENST00000298746 CHRNDQ07001 517 aa12.52□□□□□ -0.4
TRUB1-201ENST00000298746 MYO1EQ12965 1108 aa12.52□□□□□ -0.4
TRUB1-201ENST00000298746 NPY5RQ15761 445 aa12.52□□□□□ -0.4
TRUB1-201ENST00000298746 CDC37Q16543 378 aaPredicted RBP12.52□□□□□ -0.4
TRUB1-201ENST00000298746 ZNF662Q6ZS27 426 aa12.52□□□□□ -0.4
TRUB1-201ENST00000298746 PEX26Q7Z412 305 aa12.52□□□□□ -0.4
TRUB1-201ENST00000298746 RNF10Q8N5U6 811 aaKnown RBP12.52□□□□□ -0.4
TRUB1-201ENST00000298746 TNFRSF25Q93038 417 aa12.52□□□□□ -0.4
TRUB1-201ENST00000298746 IQCDQ96DY2 449 aa12.52□□□□□ -0.4
TRUB1-201ENST00000298746 PURBQ96QR8 312 aaKnown RBP12.52□□□□□ -0.4
TRUB1-201ENST00000298746 UBA5Q9GZZ9 404 aa12.52□□□□□ -0.4
TRUB1-201ENST00000298746 SAMD15Q9P1V8 674 aa12.52□□□□□ -0.4
TRUB1-201ENST00000298746 BIN2Q9UBW5 565 aaPredicted RBP12.52□□□□□ -0.4
TRUB1-201ENST00000298746 AMACRQ9UHK6 382 aa12.52□□□□□ -0.4
TRUB1-201ENST00000298746 PAX7P23759 505 aa12.52□□□□□ -0.41
TRUB1-201ENST00000298746 GCKP35557 465 aa12.52□□□□□ -0.41
TRUB1-201ENST00000298746 NONOQ15233 471 aaKnown RBP eCLIP12.52□□□□□ -0.41
TRUB1-201ENST00000298746 FAM83BQ5T0W9 1011 aa12.52□□□□□ -0.41
TRUB1-201ENST00000298746 FUKQ8N0W3 1084 aa12.52□□□□□ -0.41
TRUB1-201ENST00000298746 CCDC63Q8NA47 563 aa12.52□□□□□ -0.41
TRUB1-201ENST00000298746 PACSIN1Q9BY11 444 aa12.52□□□□□ -0.41
TRUB1-201ENST00000298746 SEMA6BQ9H3T3 888 aa12.52□□□□□ -0.41
TRUB1-201ENST00000298746 TPX2Q9ULW0 747 aaKnown RBP12.52□□□□□ -0.41
TRUB1-201ENST00000298746 C5P01031 1676 aa12.52□□□□□ -0.41
TRUB1-201ENST00000298746 SPATA31A3Q5VYP0 1347 aa12.52□□□□□ -0.41
TRUB1-201ENST00000298746 A0A1W2PQJ5 194 aa12.52□□□□□ -0.41
TRUB1-201ENST00000298746 CALRP27797 417 aaKnown RBP12.52□□□□□ -0.41
TRUB1-201ENST00000298746 PPP4R3AQ6IN85 833 aa12.52□□□□□ -0.41
TRUB1-201ENST00000298746 PDXDC1Q6P996 788 aa12.52□□□□□ -0.41
TRUB1-201ENST00000298746 BICDL1Q6ZP65 573 aa12.52□□□□□ -0.41
TRUB1-201ENST00000298746 MICAL1Q8TDZ2 1067 aa12.52□□□□□ -0.41
TRUB1-201ENST00000298746 GGT7Q9UJ14 662 aa12.52□□□□□ -0.41
TRUB1-201ENST00000298746 CD2APQ9Y5K6 639 aa12.52□□□□□ -0.41
TRUB1-201ENST00000298746 SART1O43290 800 aaKnown RBP12.51□□□□□ -0.41
TRUB1-201ENST00000298746 ITGB3BPQ13352 177 aaPredicted RBP12.51□□□□□ -0.41
TRUB1-201ENST00000298746 QPCTQ16769 361 aa12.51□□□□□ -0.41
TRUB1-201ENST00000298746 KRT79Q5XKE5 535 aa12.51□□□□□ -0.41
TRUB1-201ENST00000298746 CCDC197Q8NCU1 140 aa12.51□□□□□ -0.41
TRUB1-201ENST00000298746 CCDC26Q8TAB7 109 aa12.51□□□□□ -0.41
TRUB1-201ENST00000298746 SNX29Q8TEQ0 813 aa12.51□□□□□ -0.41
TRUB1-201ENST00000298746 TRIM6Q9C030 488 aaPredicted RBP12.51□□□□□ -0.41
TRUB1-201ENST00000298746 CCSER1Q9C0I3 900 aa12.51□□□□□ -0.41
TRUB1-201ENST00000298746 GDF3Q9NR23 364 aa12.51□□□□□ -0.41
TRUB1-201ENST00000298746 SWAP70Q9UH65 585 aa12.51□□□□□ -0.41
TRUB1-201ENST00000298746 UTP11Q9Y3A2 253 aaKnown RBP12.51□□□□□ -0.41
TRUB1-201ENST00000298746 C4AP0C0L4 1744 aa12.51□□□□□ -0.41
TRUB1-201ENST00000298746 C4BP0C0L5 1744 aa12.51□□□□□ -0.41
TRUB1-201ENST00000298746 SMCO2A6NFE2 343 aa12.51□□□□□ -0.41
TRUB1-201ENST00000298746 SERPING1P05155 500 aa12.51□□□□□ -0.41
TRUB1-201ENST00000298746 KRT13P13646 458 aa12.51□□□□□ -0.41
TRUB1-201ENST00000298746 SCTRP47872 440 aa12.51□□□□□ -0.41
TRUB1-201ENST00000298746 CACNB1Q02641 598 aaPredicted RBP12.51□□□□□ -0.41
TRUB1-201ENST00000298746 DDR1Q08345 913 aa12.51□□□□□ -0.41
TRUB1-201ENST00000298746 IFI16Q16666 785 aaKnown RBP12.51□□□□□ -0.41
TRUB1-201ENST00000298746 PREPLQ4J6C6 727 aaPredicted RBP12.51□□□□□ -0.41
TRUB1-201ENST00000298746 TMBIM4Q9HC24 238 aa12.51□□□□□ -0.41
TRUB1-201ENST00000298746 STK38LQ9Y2H1 464 aa12.51□□□□□ -0.41
TRUB1-201ENST00000298746 EIF4E1BA6NMX2 242 aaKnown RBP12.5□□□□□ -0.41
TRUB1-201ENST00000298746 GNAQP50148 359 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 CDK17Q00537 523 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 MTMR3Q13615 1198 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 DZIP1Q86YF9 867 aaKnown RBP12.5□□□□□ -0.41
TRUB1-201ENST00000298746 FMNL3Q8IVF7 1028 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 MGARPQ8TDB4 240 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 RAPGEF5Q92565 580 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 RAB34Q9BZG1 259 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 C6orf50Q9HD87 102 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 LEMD3Q9Y2U8 911 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 A0A087X0T9 212 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 DNM1LO00429 736 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 FAM228BP0C875 321 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 ERVK-9P63128 1117 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 FIGNQ5HY92 759 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 YTHDF3Q7Z739 585 aaKnown RBP12.5□□□□□ -0.41
TRUB1-201ENST00000298746 KIAA0895Q8NCT3 520 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 ELAC2Q9BQ52 826 aaKnown RBP12.5□□□□□ -0.41
TRUB1-201ENST00000298746 PCDHA6Q9UN73 950 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 PCDHA8Q9Y5H6 950 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 SLCO1A2P46721 670 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 PSEN1P49768 467 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 DCAF17Q5H9S7 520 aaPredicted RBP12.5□□□□□ -0.41
TRUB1-201ENST00000298746 VPS36Q86VN1 386 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 CCDC25Q86WR0 208 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 MYOCDQ8IZQ8 938 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 USP38Q8NB14 1042 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 LARP4BQ92615 738 aaKnown RBP12.5□□□□□ -0.41
TRUB1-201ENST00000298746 MIEF2Q96C03 454 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 CUEDC2Q9H467 287 aa12.5□□□□□ -0.41
TRUB1-201ENST00000298746 NIP7Q9Y221 180 aaKnown RBP eCLIP12.5□□□□□ -0.41
TRUB1-201ENST00000298746 USP17L3A6NCW0 530 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 USP17L4A6NCW7 530 aa12.49□□□□□ -0.41
TRUB1-201ENST00000298746 PGRMC1O00264 195 aaKnown RBP12.49□□□□□ -0.41
TRUB1-201ENST00000298746 GCFC2P16383 781 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms