RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 PNMA6FA0A0J9YX94 578 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 STXBP3O00186 592 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 ZBTB5O15062 677 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 PRPF3O43395 683 aaKnown RBP6.82□□□□□ -1.32
SSX3-201ENST00000298396 FKTNO75072 461 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 ZBED4O75132 1171 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 IGHA2P01877 340 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 STAT3P40763 770 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 GNAQP50148 359 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 LBX1P52954 281 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 OAZ1P54368 228 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 SP3Q02447 781 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 SEMA3FQ13275 785 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 NR5A1Q13285 461 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 CUL4AQ13619 759 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 PLS1Q14651 629 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 NPY5RQ15761 445 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 USH1GQ495M9 461 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 SYNE3Q6ZMZ3 975 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 GPR142Q7Z601 462 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 SHCBP1Q8NEM2 672 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 SMARCC2Q8TAQ2 1214 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 SNX21Q969T3 373 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 KCTD15Q96SI1 283 aaPredicted RBP6.82□□□□□ -1.32
SSX3-201ENST00000298396 LZTS2Q9BRK4 669 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 TEX13BQ9BXU2 312 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 SLKQ9H2G2 1235 aaPredicted RBP6.82□□□□□ -1.32
SSX3-201ENST00000298396 HOMER2Q9NSB8 354 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 GJB4Q9NTQ9 266 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 RNF146Q9NTX7 359 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 CCPG1Q9ULG6 757 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 GABRQQ9UN88 632 aa6.82□□□□□ -1.32
SSX3-201ENST00000298396 DDX49Q9Y6V7 483 aaKnown RBP6.82□□□□□ -1.32
SSX3-201ENST00000298396 STK36Q9NRP7 1315 aa6.81□□□□□ -1.32
SSX3-201ENST00000298396 MYH9P35579 1960 aaKnown RBP6.81□□□□□ -1.32
SSX3-201ENST00000298396 DNAJC25-GNG10A0A024R161 153 aa6.81□□□□□ -1.32
SSX3-201ENST00000298396 PTPDC1A2A3K4 754 aa6.81□□□□□ -1.32
SSX3-201ENST00000298396 COBLO75128 1261 aa6.81□□□□□ -1.32
SSX3-201ENST00000298396 ALAS1P13196 640 aa6.81□□□□□ -1.32
SSX3-201ENST00000298396 PSMC4P43686 418 aa6.81□□□□□ -1.32
SSX3-201ENST00000298396 CTCFP49711 727 aaPredicted RBP6.81□□□□□ -1.32
SSX3-201ENST00000298396 GHRHRQ02643 423 aa6.81□□□□□ -1.32
SSX3-201ENST00000298396 GRB14Q14449 540 aa6.81□□□□□ -1.32
SSX3-201ENST00000298396 PPP2R5BQ15173 497 aa6.81□□□□□ -1.32
SSX3-201ENST00000298396 PFKFB3Q16875 520 aaPredicted RBP6.81□□□□□ -1.32
SSX3-201ENST00000298396 TRAF7Q6Q0C0 670 aa6.81□□□□□ -1.32
SSX3-201ENST00000298396 SLC30A10Q6XR72 485 aa6.81□□□□□ -1.32
SSX3-201ENST00000298396 OTOP1Q7RTM1 612 aa6.81□□□□□ -1.32
SSX3-201ENST00000298396 NCAPG2Q86XI2 1143 aa6.81□□□□□ -1.32
SSX3-201ENST00000298396 FBXO11Q86XK2 927 aa6.81□□□□□ -1.32
SSX3-201ENST00000298396 RRP36Q96EU6 259 aaKnown RBP6.81□□□□□ -1.32
SSX3-201ENST00000298396 ZSCAN31Q96LW9 406 aaPredicted RBP6.81□□□□□ -1.32
SSX3-201ENST00000298396 TRERF1Q96PN7 1200 aa6.81□□□□□ -1.32
SSX3-201ENST00000298396 PURBQ96QR8 312 aaKnown RBP6.81□□□□□ -1.32
SSX3-201ENST00000298396 SLC26A6Q9BXS9 759 aa6.81□□□□□ -1.32
SSX3-201ENST00000298396 RNF26Q9BY78 433 aaPredicted RBP6.81□□□□□ -1.32
SSX3-201ENST00000298396 A1CFQ9NQ94 594 aaKnown RBP6.81□□□□□ -1.32
SSX3-201ENST00000298396 SH2B1Q9NRF2 756 aaPredicted RBP6.81□□□□□ -1.32
SSX3-201ENST00000298396 FLRT1Q9NZU1 646 aa6.81□□□□□ -1.32
SSX3-201ENST00000298396 COL20A1Q9P218 1284 aa6.81□□□□□ -1.32
SSX3-201ENST00000298396 ALPK3Q96L96 1907 aa6.81□□□□□ -1.32
SSX3-201ENST00000298396 TRIP12Q14669 1992 aaPredicted RBP6.8□□□□□ -1.32
SSX3-201ENST00000298396 ABCB11O95342 1321 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 CCDC196A0A1B0GTZ2 297 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 SLC15A5A6NIM6 579 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 K7ELQ4 463 aaPredicted RBP6.8□□□□□ -1.32
SSX3-201ENST00000298396 DHX16O60231 1041 aaKnown RBP6.8□□□□□ -1.32
SSX3-201ENST00000298396 SLC25A27O95847 323 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 PGK2P07205 417 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 SCG2P13521 617 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 SMPD1P17405 629 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 ADORA2AP29274 412 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 MAPK4P31152 587 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 HSD17B4P51659 736 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 CNTN2Q02246 1040 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 PRKCZQ05513 592 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 SSRP1Q08945 709 aaKnown RBP6.8□□□□□ -1.32
SSX3-201ENST00000298396 FOXC1Q12948 553 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 CCL14Q16627 93 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 TKFCQ3LXA3 575 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 VASH1Q7L8A9 365 aaPredicted RBP6.8□□□□□ -1.32
SSX3-201ENST00000298396 HEATR3Q7Z4Q2 680 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 PLEKHH3Q7Z736 793 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 FAM133AQ8N9E0 248 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 CHST13Q8NET6 341 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 NPLOC4Q8TAT6 608 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 DDX11Q96FC9 970 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 CALR3Q96L12 384 aaKnown RBP6.8□□□□□ -1.32
SSX3-201ENST00000298396 AMNQ9BXJ7 453 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 KLF16Q9BXK1 252 aaPredicted RBP6.8□□□□□ -1.32
SSX3-201ENST00000298396 MROH8Q9H579 483 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 ACAD9Q9H845 621 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 BARHL2Q9NY43 387 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 CYP39A1Q9NYL5 469 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 VPS54Q9P1Q0 977 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 PCDHA1Q9Y5I3 950 aa6.8□□□□□ -1.32
SSX3-201ENST00000298396 FRMPD4Q14CM0 1322 aa6.79□□□□□ -1.32
SSX3-201ENST00000298396 M0R2N6 131 aa6.79□□□□□ -1.32
SSX3-201ENST00000298396 TNFRSF10AO00220 468 aa6.79□□□□□ -1.32
SSX3-201ENST00000298396 PIK3CDO00329 1044 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms