RNA–Protein interactions for RNA: ENST00000296742.11

CAGE1-201, Transcript of cancer antigen 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAGE1, Length 2,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAGE1-201ENST00000296742 CDC42EP5Q6NZY7 148 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 WDR59Q6PJI9 974 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 SPATS2Q86XZ4 545 aaKnown RBP13.79□□□□□ -0.2
CAGE1-201ENST00000296742 SLF2Q8IX21 1173 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 ZNF473Q8WTR7 871 aaKnown RBP13.79□□□□□ -0.2
CAGE1-201ENST00000296742 FAM163AQ96GL9 167 aaPredicted RBP13.79□□□□□ -0.2
CAGE1-201ENST00000296742 TMX4Q9H1E5 349 aaPredicted RBP13.79□□□□□ -0.2
CAGE1-201ENST00000296742 ZNF287Q9HBT7 754 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 SLC24A3Q9HC58 644 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 KCNG1Q9UIX4 513 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 CDK5RAP2Q96SN8 1893 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 ATXN2Q99700 1313 aaKnown RBP13.79□□□□□ -0.2
CAGE1-201ENST00000296742 PAX7P23759 505 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 ALDH1B1P30837 517 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 SLC16A2P36021 539 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 EPHB4P54760 987 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 HDLBPQ00341 1268 aaKnown RBP13.79□□□□□ -0.2
CAGE1-201ENST00000296742 LRCH2Q5VUJ6 765 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 NELFBQ8WX92 580 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 ANKS1AQ92625 1134 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 COA7Q96BR5 231 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 SCLT1Q96NL6 688 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 TACO1Q9BSH4 297 aaKnown RBP13.79□□□□□ -0.2
CAGE1-201ENST00000296742 VCPKMTQ9H867 229 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 EHD2Q9NZN4 543 aa13.79□□□□□ -0.2
CAGE1-201ENST00000296742 BIN2Q9UBW5 565 aaPredicted RBP13.79□□□□□ -0.2
CAGE1-201ENST00000296742 DDX60LQ5H9U9 1706 aaKnown RBP13.78□□□□□ -0.2
CAGE1-201ENST00000296742 MYH1P12882 1939 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 LRRC10BA6NIK2 292 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 PLSCR1O15162 318 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 PDE6BP35913 854 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 LETM2Q2VYF4 491 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 RASSF8Q8NHQ8 419 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 MASTLQ96GX5 879 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 CCDC114Q96M63 670 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 MTRQ99707 1265 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 EPN3Q9H201 632 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 SLC40A1Q9NP59 571 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 TCP11L1Q9NUJ3 509 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 TMEM260Q9NX78 707 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 BARHL2Q9NY43 387 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 CALML3P27482 149 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 SMTNP53814 917 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 EN1Q05925 392 aaPredicted RBP13.78□□□□□ -0.2
CAGE1-201ENST00000296742 E2F5Q15329 346 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 APOBEC3HQ6NTF7 200 aaKnown RBP13.78□□□□□ -0.2
CAGE1-201ENST00000296742 KIRREL3Q8IZU9 778 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 SPATA4Q8NEY3 305 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 FERMT2Q96AC1 680 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 ADAMTSL1Q8N6G6 1762 aa13.78□□□□□ -0.2
CAGE1-201ENST00000296742 SMCO2A6NFE2 343 aa13.77□□□□□ -0.2
CAGE1-201ENST00000296742 A6NNZ2 444 aa13.77□□□□□ -0.2
CAGE1-201ENST00000296742 EPB41P11171 864 aaKnown RBP13.77□□□□□ -0.2
CAGE1-201ENST00000296742 PDHBP11177 359 aa13.77□□□□□ -0.2
CAGE1-201ENST00000296742 CYLC1P35663 651 aaPredicted RBP13.77□□□□□ -0.2
CAGE1-201ENST00000296742 TUBB8Q3ZCM7 444 aa13.77□□□□□ -0.2
CAGE1-201ENST00000296742 CCDC181Q5TID7 509 aa13.77□□□□□ -0.2
CAGE1-201ENST00000296742 ALS2CLQ60I27 953 aa13.77□□□□□ -0.2
CAGE1-201ENST00000296742 TTBK2Q6IQ55 1244 aa13.77□□□□□ -0.2
CAGE1-201ENST00000296742 SH3RF1Q7Z6J0 888 aa13.77□□□□□ -0.2
CAGE1-201ENST00000296742 CREG2Q8IUH2 290 aa13.77□□□□□ -0.2
CAGE1-201ENST00000296742 ZSCAN29Q8IWY8 852 aaPredicted RBP13.77□□□□□ -0.2
CAGE1-201ENST00000296742 CCDC43Q96MW1 224 aaKnown RBP13.77□□□□□ -0.2
CAGE1-201ENST00000296742 SERPINB13Q9UIV8 391 aa13.77□□□□□ -0.2
CAGE1-201ENST00000296742 TRIM49BA6NDI0 452 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 E7EVH7 732 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 BRD2P25440 801 aaKnown RBP13.77□□□□□ -0.21
CAGE1-201ENST00000296742 GNAQP50148 359 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 KIF5AQ12840 1032 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 AOC3Q16853 763 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 TMED8Q6PL24 325 aaPredicted RBP13.77□□□□□ -0.21
CAGE1-201ENST00000296742 EEF2KMTQ96G04 330 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 CCT8L2Q96SF2 557 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 AGPAT5Q9NUQ2 364 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 MTMR4Q9NYA4 1195 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 ANO9A1A5B4 782 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 PPP1R37O75864 691 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 RASSF9O75901 435 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 TRIM21P19474 475 aaKnown RBP13.77□□□□□ -0.21
CAGE1-201ENST00000296742 CCDC96Q2M329 555 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 CFAP58Q5T655 872 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 EMBQ6PCB8 327 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 KCTD1Q719H9 257 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 NLRP14Q86W24 1093 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 MMGT1Q8N4V1 131 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 MB21D1Q8N884 522 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 C4orf32Q8N8J7 132 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 TEKT1Q969V4 418 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 DNAJC7Q99615 494 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 PPANQ9NQ55 473 aaKnown RBP13.77□□□□□ -0.21
CAGE1-201ENST00000296742 STIM2Q9P246 746 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 RWDD2AQ9UIY3 292 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 SNX12Q9UMY4 172 aa13.77□□□□□ -0.21
CAGE1-201ENST00000296742 M0R2N6 131 aa13.76□□□□□ -0.21
CAGE1-201ENST00000296742 CCNT1O60563 726 aaKnown RBP13.76□□□□□ -0.21
CAGE1-201ENST00000296742 GCFC2P16383 781 aaKnown RBP13.76□□□□□ -0.21
CAGE1-201ENST00000296742 NR1D1P20393 614 aa13.76□□□□□ -0.21
CAGE1-201ENST00000296742 HPDP32754 393 aaPredicted RBP13.76□□□□□ -0.21
CAGE1-201ENST00000296742 CRKP46108 304 aa13.76□□□□□ -0.21
CAGE1-201ENST00000296742 SNCBQ16143 134 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms