RNA–Protein interactions for RNA: ENST00000295226.1

CCDC140-201, Transcript of coiled-coil domain containing 140, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC140, Length 1,699 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC140-201ENST00000295226 HOXD10P28358 340 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 LBX1P52954 281 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 GRIN1Q05586 938 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 TRIM32Q13049 653 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 MTMR1Q13613 665 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 SLC39A14Q15043 492 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 IL17AQ16552 155 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 CALCRLQ16602 461 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 XRRA1Q6P2D8 792 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 MOXD1Q6UVY6 613 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 OTOP1Q7RTM1 612 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 TRIB2Q92519 343 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 SPATA32Q96LK8 384 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 INPP4AQ96PE3 977 aaPredicted RBP17.16■□□□□ 0.34
CCDC140-201ENST00000295226 KCNH7Q9NS40 1196 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 HTTP42858 3142 aa17.16■□□□□ 0.34
CCDC140-201ENST00000295226 B4DLN1 442 aa17.15■□□□□ 0.34
CCDC140-201ENST00000295226 ATL3Q6DD88 541 aa17.15■□□□□ 0.34
CCDC140-201ENST00000295226 MTMR9Q96QG7 549 aa17.15■□□□□ 0.34
CCDC140-201ENST00000295226 MPHOSPH6Q99547 160 aaKnown RBP17.15■□□□□ 0.34
CCDC140-201ENST00000295226 RCOR1Q9UKL0 485 aa17.15■□□□□ 0.34
CCDC140-201ENST00000295226 LRRC37A2A6NM11 1700 aa17.15■□□□□ 0.34
CCDC140-201ENST00000295226 SPTLC2O15270 562 aa17.14■□□□□ 0.33
CCDC140-201ENST00000295226 MARCH6O60337 910 aa17.14■□□□□ 0.33
CCDC140-201ENST00000295226 XRCC5P13010 732 aaKnown RBP17.14■□□□□ 0.33
CCDC140-201ENST00000295226 TXKP42681 527 aa17.14■□□□□ 0.33
CCDC140-201ENST00000295226 ATP2C1P98194 919 aaPredicted RBP17.14■□□□□ 0.33
CCDC140-201ENST00000295226 SP2Q02086 613 aa17.14■□□□□ 0.33
CCDC140-201ENST00000295226 OLFML2BQ68BL8 750 aa17.14■□□□□ 0.33
CCDC140-201ENST00000295226 NLRX1Q86UT6 975 aa17.14■□□□□ 0.33
CCDC140-201ENST00000295226 ETNPPLQ8TBG4 499 aa17.14■□□□□ 0.33
CCDC140-201ENST00000295226 RAET1EQ8TD07 263 aa17.14■□□□□ 0.33
CCDC140-201ENST00000295226 CLIC6Q96NY7 704 aa17.14■□□□□ 0.33
CCDC140-201ENST00000295226 NAP1L4Q99733 375 aaKnown RBP17.14■□□□□ 0.33
CCDC140-201ENST00000295226 KATNBL1Q9H079 304 aa17.14■□□□□ 0.33
CCDC140-201ENST00000295226 AGO4Q9HCK5 861 aaKnown RBP17.14■□□□□ 0.33
CCDC140-201ENST00000295226 KCNMB3Q9NPA1 279 aa17.14■□□□□ 0.33
CCDC140-201ENST00000295226 ADCY3O60266 1144 aa17.13■□□□□ 0.33
CCDC140-201ENST00000295226 ARIH2O95376 493 aa17.13■□□□□ 0.33
CCDC140-201ENST00000295226 YEATS4O95619 227 aa17.13■□□□□ 0.33
CCDC140-201ENST00000295226 OR52Z1P0C646 297 aa17.13■□□□□ 0.33
CCDC140-201ENST00000295226 TAPT1Q6NXT6 567 aa17.13■□□□□ 0.33
CCDC140-201ENST00000295226 ZNF577Q9BSK1 485 aa17.13■□□□□ 0.33
CCDC140-201ENST00000295226 ZHX1Q9UKY1 873 aaPredicted RBP17.13■□□□□ 0.33
CCDC140-201ENST00000295226 CEP131Q9UPN4 1083 aa17.13■□□□□ 0.33
CCDC140-201ENST00000295226 SYNGAP1Q96PV0 1343 aa17.13■□□□□ 0.33
CCDC140-201ENST00000295226 SPATA31C2B4DYI2 1134 aa17.13■□□□□ 0.33
CCDC140-201ENST00000295226 DDX39AO00148 427 aaKnown RBP17.13■□□□□ 0.33
CCDC140-201ENST00000295226 STAM2O75886 525 aa17.13■□□□□ 0.33
CCDC140-201ENST00000295226 IGHA2P01877 340 aa17.13■□□□□ 0.33
CCDC140-201ENST00000295226 ITGB3BPQ13352 177 aaPredicted RBP17.13■□□□□ 0.33
CCDC140-201ENST00000295226 ACVR2BQ13705 512 aa17.13■□□□□ 0.33
CCDC140-201ENST00000295226 LY6KQ17RY6 165 aa17.13■□□□□ 0.33
CCDC140-201ENST00000295226 SPECC1Q5M775 1068 aa17.13■□□□□ 0.33
CCDC140-201ENST00000295226 GJC2Q5T442 439 aaPredicted RBP17.13■□□□□ 0.33
CCDC140-201ENST00000295226 NIPA1Q7RTP0 329 aa17.13■□□□□ 0.33
CCDC140-201ENST00000295226 GPRASP2Q96D09 838 aa17.13■□□□□ 0.33
CCDC140-201ENST00000295226 SCAND2PQ9GZW5 306 aaPredicted RBP17.13■□□□□ 0.33
CCDC140-201ENST00000295226 TELO2Q9Y4R8 837 aa17.13■□□□□ 0.33
CCDC140-201ENST00000295226 PTCH2Q9Y6C5 1203 aa17.13■□□□□ 0.33
CCDC140-201ENST00000295226 DOCK5Q9H7D0 1870 aa17.12■□□□□ 0.33
CCDC140-201ENST00000295226 LOC102724159A0A0B4J2E5 919 aa17.12■□□□□ 0.33
CCDC140-201ENST00000295226 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.12■□□□□ 0.33
CCDC140-201ENST00000295226 VWA3AA6NCI4 1184 aa17.12■□□□□ 0.33
CCDC140-201ENST00000295226 IPO5O00410 1097 aaKnown RBP17.12■□□□□ 0.33
CCDC140-201ENST00000295226 GNRH1P01148 92 aa17.12■□□□□ 0.33
CCDC140-201ENST00000295226 ADCYAP1R1P41586 468 aa17.12■□□□□ 0.33
CCDC140-201ENST00000295226 TECP42680 631 aa17.12■□□□□ 0.33
CCDC140-201ENST00000295226 ME1P48163 572 aa17.12■□□□□ 0.33
CCDC140-201ENST00000295226 SETQ01105 290 aaPredicted RBP17.12■□□□□ 0.33
CCDC140-201ENST00000295226 IRF5Q13568 498 aa17.12■□□□□ 0.33
CCDC140-201ENST00000295226 ARHGEF6Q15052 776 aa17.12■□□□□ 0.33
CCDC140-201ENST00000295226 PWP2Q15269 919 aaKnown RBP17.12■□□□□ 0.33
CCDC140-201ENST00000295226 GNPTABQ3T906 1256 aa17.12■□□□□ 0.33
CCDC140-201ENST00000295226 TRPV1Q8NER1 839 aa17.12■□□□□ 0.33
CCDC140-201ENST00000295226 COPS5Q92905 334 aa17.12■□□□□ 0.33
CCDC140-201ENST00000295226 FBXO2Q9UK22 296 aaPredicted RBP17.12■□□□□ 0.33
CCDC140-201ENST00000295226 PCDHA7Q9UN72 937 aa17.12■□□□□ 0.33
CCDC140-201ENST00000295226 PRPF40AO75400 957 aaKnown RBP17.11■□□□□ 0.33
CCDC140-201ENST00000295226 ORC2Q13416 577 aaPredicted RBP17.11■□□□□ 0.33
CCDC140-201ENST00000295226 MSL3Q8N5Y2 521 aaKnown RBP17.11■□□□□ 0.33
CCDC140-201ENST00000295226 SLC5A5Q92911 643 aa17.11■□□□□ 0.33
CCDC140-201ENST00000295226 ABHD16BQ9H3Z7 469 aa17.11■□□□□ 0.33
CCDC140-201ENST00000295226 TTC12Q9H892 705 aaPredicted RBP17.11■□□□□ 0.33
CCDC140-201ENST00000295226 VTA1Q9NP79 307 aa17.11■□□□□ 0.33
CCDC140-201ENST00000295226 DHX15O43143 795 aaKnown RBP17.1■□□□□ 0.33
CCDC140-201ENST00000295226 ADCY6O43306 1168 aa17.1■□□□□ 0.33
CCDC140-201ENST00000295226 GADD45BO75293 160 aaPredicted RBP17.1■□□□□ 0.33
CCDC140-201ENST00000295226 BMP15O95972 392 aa17.1■□□□□ 0.33
CCDC140-201ENST00000295226 ZNF865P0CJ78 1059 aaPredicted RBP17.1■□□□□ 0.33
CCDC140-201ENST00000295226 KCNA2P16389 499 aa17.1■□□□□ 0.33
CCDC140-201ENST00000295226 CDC25AP30304 524 aa17.1■□□□□ 0.33
CCDC140-201ENST00000295226 ICAM3P32942 547 aa17.1■□□□□ 0.33
CCDC140-201ENST00000295226 CTCFP49711 727 aaPredicted RBP17.1■□□□□ 0.33
CCDC140-201ENST00000295226 SP4Q02446 784 aa17.1■□□□□ 0.33
CCDC140-201ENST00000295226 CCDC144BQ3MJ40 725 aa17.1■□□□□ 0.33
CCDC140-201ENST00000295226 LRCH2Q5VUJ6 765 aa17.1■□□□□ 0.33
CCDC140-201ENST00000295226 MFSD14CQ5VZR4 134 aa17.1■□□□□ 0.33
CCDC140-201ENST00000295226 DTHD1Q6ZMT9 781 aa17.1■□□□□ 0.33
CCDC140-201ENST00000295226 KCNG4Q8TDN1 519 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms