RNA–Protein interactions for RNA: ENST00000294489.10

PDPN-201, Transcript of podoplanin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDPN, Length 3,104 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-201ENST00000294489 ADSSL1Q8N142 457 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 SNX29Q8TEQ0 813 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 C16orf45Q96MC5 204 aaPredicted RBP10.24□□□□□ -0.77
PDPN-201ENST00000294489 STK24Q9Y6E0 443 aa10.24□□□□□ -0.77
PDPN-201ENST00000294489 GLTPD2A6NH11 291 aa10.23□□□□□ -0.77
PDPN-201ENST00000294489 POTEMA6NI47 508 aa10.23□□□□□ -0.77
PDPN-201ENST00000294489 HOXA7P31268 230 aaPredicted RBP10.23□□□□□ -0.77
PDPN-201ENST00000294489 DSG3P32926 999 aa10.23□□□□□ -0.77
PDPN-201ENST00000294489 DPY19L2Q6NUT2 758 aa10.23□□□□□ -0.77
PDPN-201ENST00000294489 CATSPERGQ6ZRH7 1159 aa10.23□□□□□ -0.77
PDPN-201ENST00000294489 MCF2L2Q86YR7 1114 aa10.23□□□□□ -0.77
PDPN-201ENST00000294489 KCTD17Q8N5Z5 321 aa10.23□□□□□ -0.77
PDPN-201ENST00000294489 GIMAP8Q8ND71 665 aaPredicted RBP10.23□□□□□ -0.77
PDPN-201ENST00000294489 RBM46Q8TBY0 533 aaKnown RBP10.23□□□□□ -0.77
PDPN-201ENST00000294489 KCND1Q9NSA2 647 aa10.23□□□□□ -0.77
PDPN-201ENST00000294489 VAV3Q9UKW4 847 aa10.23□□□□□ -0.77
PDPN-201ENST00000294489 CCPG1Q9ULG6 757 aa10.23□□□□□ -0.77
PDPN-201ENST00000294489 MAPK8IP1Q9UQF2 711 aa10.23□□□□□ -0.77
PDPN-201ENST00000294489 ZHX2Q9Y6X8 837 aa10.23□□□□□ -0.77
PDPN-201ENST00000294489 POTECB2RU33 542 aa10.23□□□□□ -0.77
PDPN-201ENST00000294489 PDE4DQ08499 809 aa10.23□□□□□ -0.77
PDPN-201ENST00000294489 NIPA1Q7RTP0 329 aa10.23□□□□□ -0.77
PDPN-201ENST00000294489 LARP4BQ92615 738 aaKnown RBP10.23□□□□□ -0.77
PDPN-201ENST00000294489 EHMT1Q9H9B1 1298 aa10.23□□□□□ -0.77
PDPN-201ENST00000294489 ADM5C9JUS6 153 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 MSH4O15457 936 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 TNNT1P13805 278 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 VGLL4Q14135 290 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 CCAR2Q8N163 923 aaKnown RBP10.22□□□□□ -0.77
PDPN-201ENST00000294489 RAD54LQ92698 747 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 SLC5A5Q92911 643 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 DHTKD1Q96HY7 919 aaPredicted RBP10.22□□□□□ -0.77
PDPN-201ENST00000294489 NUDT12Q9BQG2 462 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 ADD3Q9UEY8 706 aaKnown RBP10.22□□□□□ -0.77
PDPN-201ENST00000294489 FZD1Q9UP38 647 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 KDM3AQ9Y4C1 1321 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 UQCRHLA0A096LP55 91 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 CCP110O43303 1012 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 ZBED4O75132 1171 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 FLOT1O75955 427 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 UQCRHP07919 91 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 BCRP11274 1271 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 EPHX2P34913 555 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 TBX2Q13207 712 aaPredicted RBP10.22□□□□□ -0.77
PDPN-201ENST00000294489 PTPN14Q15678 1187 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 ECM1Q16610 540 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 B3GNT9Q6UX72 402 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 SULF1Q8IWU6 871 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 TANGO6Q9C0B7 1094 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 NT5C3AQ9H0P0 336 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 LRRC37A2A6NM11 1700 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 MEIS1O00470 390 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 GRIN3BO60391 1043 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 CFBP00751 764 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 APTXQ7Z2E3 356 aaKnown RBP10.22□□□□□ -0.77
PDPN-201ENST00000294489 TRMT1Q9NXH9 659 aaKnown RBP10.22□□□□□ -0.77
PDPN-201ENST00000294489 COL20A1Q9P218 1284 aa10.22□□□□□ -0.77
PDPN-201ENST00000294489 LIMA1Q9UHB6 759 aaKnown RBP10.22□□□□□ -0.77
PDPN-201ENST00000294489 PVALEFA0A1B0GWK0 134 aa10.21□□□□□ -0.77
PDPN-201ENST00000294489 BICDL2A1A5D9 508 aa10.21□□□□□ -0.77
PDPN-201ENST00000294489 LRRC10BA6NIK2 292 aa10.21□□□□□ -0.77
PDPN-201ENST00000294489 N4BP3O15049 544 aa10.21□□□□□ -0.77
PDPN-201ENST00000294489 EHHADHQ08426 723 aa10.21□□□□□ -0.77
PDPN-201ENST00000294489 PRR16Q569H4 304 aa10.21□□□□□ -0.77
PDPN-201ENST00000294489 TCP11X2Q5H9J9 407 aa10.21□□□□□ -0.77
PDPN-201ENST00000294489 MUM1L1Q5H9M0 696 aa10.21□□□□□ -0.77
PDPN-201ENST00000294489 PPFIBP1Q86W92 1011 aa10.21□□□□□ -0.77
PDPN-201ENST00000294489 KCNJ18B7U540 433 aa10.21□□□□□ -0.78
PDPN-201ENST00000294489 KIF2AO00139 706 aaPredicted RBP10.21□□□□□ -0.78
PDPN-201ENST00000294489 NFIBO00712 420 aa10.21□□□□□ -0.78
PDPN-201ENST00000294489 COBLO75128 1261 aa10.21□□□□□ -0.78
PDPN-201ENST00000294489 PSMD10O75832 226 aa10.21□□□□□ -0.78
PDPN-201ENST00000294489 HMGCS2P54868 508 aa10.21□□□□□ -0.78
PDPN-201ENST00000294489 SETQ01105 290 aaPredicted RBP10.21□□□□□ -0.78
PDPN-201ENST00000294489 PPP2R5CQ13362 524 aa10.21□□□□□ -0.78
PDPN-201ENST00000294489 KCNJ12Q14500 433 aa10.21□□□□□ -0.78
PDPN-201ENST00000294489 MCM6Q14566 821 aa10.21□□□□□ -0.78
PDPN-201ENST00000294489 COG2Q14746 738 aa10.21□□□□□ -0.78
PDPN-201ENST00000294489 KRT31Q15323 416 aa10.21□□□□□ -0.78
PDPN-201ENST00000294489 PTPN21Q16825 1174 aa10.21□□□□□ -0.78
PDPN-201ENST00000294489 TKFCQ3LXA3 575 aa10.21□□□□□ -0.78
PDPN-201ENST00000294489 CREBRFQ8IUR6 639 aa10.21□□□□□ -0.78
PDPN-201ENST00000294489 MYRIPQ8NFW9 859 aa10.21□□□□□ -0.78
PDPN-201ENST00000294489 NOC3LQ8WTT2 800 aaKnown RBP10.21□□□□□ -0.78
PDPN-201ENST00000294489 ATG4CQ96DT6 458 aa10.21□□□□□ -0.78
PDPN-201ENST00000294489 CDCA5Q96FF9 252 aa10.21□□□□□ -0.78
PDPN-201ENST00000294489 WNK4Q96J92 1243 aa10.21□□□□□ -0.78
PDPN-201ENST00000294489 TRIM47Q96LD4 638 aa10.21□□□□□ -0.78
PDPN-201ENST00000294489 TMX1Q9H3N1 280 aa10.21□□□□□ -0.78
PDPN-201ENST00000294489 TAF1DQ9H5J8 278 aaPredicted RBP10.21□□□□□ -0.78
PDPN-201ENST00000294489 RAVER2Q9HCJ3 691 aaKnown RBP10.21□□□□□ -0.78
PDPN-201ENST00000294489 MAGEC2Q9UBF1 373 aaPredicted RBP10.21□□□□□ -0.78
PDPN-201ENST00000294489 ZNF214Q9UL59 606 aaPredicted RBP10.21□□□□□ -0.78
PDPN-201ENST00000294489 WDR81Q562E7 1941 aa10.21□□□□□ -0.78
PDPN-201ENST00000294489 A0A0G2JLL6 359 aaPredicted RBP10.2□□□□□ -0.78
PDPN-201ENST00000294489 UNCXA6NJT0 531 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 USP27XA6NNY8 438 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 TPM1P09493 284 aa10.2□□□□□ -0.78
PDPN-201ENST00000294489 CCT6AP40227 531 aaKnown RBP10.2□□□□□ -0.78
PDPN-201ENST00000294489 IREB2P48200 963 aaKnown RBP10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms