RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 BANK1Q8NDB2 785 aa11.47□□□□□ -0.57
SKA1-201ENST00000285116 RASSF8Q8NHQ8 419 aa11.47□□□□□ -0.57
SKA1-201ENST00000285116 PAGR1Q9BTK6 254 aa11.47□□□□□ -0.57
SKA1-201ENST00000285116 RIC8AQ9NPQ8 531 aa11.47□□□□□ -0.57
SKA1-201ENST00000285116 ARHGAP20Q9P2F6 1191 aa11.47□□□□□ -0.57
SKA1-201ENST00000285116 HYOU1Q9Y4L1 999 aa11.47□□□□□ -0.57
SKA1-201ENST00000285116 RASA1P20936 1047 aa11.46□□□□□ -0.57
SKA1-201ENST00000285116 ASIC1P78348 528 aa11.46□□□□□ -0.57
SKA1-201ENST00000285116 C2orf54Q08AI8 447 aa11.46□□□□□ -0.57
SKA1-201ENST00000285116 EZH2Q15910 746 aaKnown RBP11.46□□□□□ -0.57
SKA1-201ENST00000285116 EMC10Q5UCC4 262 aa11.46□□□□□ -0.57
SKA1-201ENST00000285116 DZIP1Q86YF9 867 aaKnown RBP11.46□□□□□ -0.57
SKA1-201ENST00000285116 C1orf131Q8NDD1 294 aaKnown RBP11.46□□□□□ -0.57
SKA1-201ENST00000285116 CALML4Q96GE6 196 aa11.46□□□□□ -0.57
SKA1-201ENST00000285116 ALS2CR12Q96Q35 445 aa11.46□□□□□ -0.57
SKA1-201ENST00000285116 IFIH1Q9BYX4 1025 aaKnown RBP11.46□□□□□ -0.57
SKA1-201ENST00000285116 NDST4Q9H3R1 872 aa11.46□□□□□ -0.57
SKA1-201ENST00000285116 RABEP2Q9H5N1 569 aa11.46□□□□□ -0.57
SKA1-201ENST00000285116 TFCP2L1Q9NZI6 479 aa11.46□□□□□ -0.57
SKA1-201ENST00000285116 QSER1Q2KHR3 1735 aa11.46□□□□□ -0.57
SKA1-201ENST00000285116 CHUKO15111 745 aa11.46□□□□□ -0.57
SKA1-201ENST00000285116 C21orf2O43822 256 aa11.46□□□□□ -0.57
SKA1-201ENST00000285116 HSF2BPO75031 334 aa11.46□□□□□ -0.57
SKA1-201ENST00000285116 BAG3O95817 575 aa11.46□□□□□ -0.57
SKA1-201ENST00000285116 KIF11P52732 1056 aa11.46□□□□□ -0.57
SKA1-201ENST00000285116 EPHB4P54760 987 aa11.46□□□□□ -0.57
SKA1-201ENST00000285116 C16orf86Q6ZW13 317 aa11.46□□□□□ -0.57
SKA1-201ENST00000285116 NEDD1Q8NHV4 660 aa11.46□□□□□ -0.57
SKA1-201ENST00000285116 BAP1Q92560 729 aa11.46□□□□□ -0.57
SKA1-201ENST00000285116 BLOC1S4Q9NUP1 217 aa11.46□□□□□ -0.57
SKA1-201ENST00000285116 GREB1LQ9C091 1923 aaPredicted RBP11.46□□□□□ -0.58
SKA1-201ENST00000285116 TAF1LQ8IZX4 1826 aa11.46□□□□□ -0.58
SKA1-201ENST00000285116 LDHCP07864 332 aa11.46□□□□□ -0.58
SKA1-201ENST00000285116 TSPY3P0CV98 308 aa11.46□□□□□ -0.58
SKA1-201ENST00000285116 TSPY8P0CW00 308 aa11.46□□□□□ -0.58
SKA1-201ENST00000285116 KLK7P49862 253 aa11.46□□□□□ -0.58
SKA1-201ENST00000285116 APBA1Q02410 837 aa11.46□□□□□ -0.58
SKA1-201ENST00000285116 GRB10Q13322 594 aa11.46□□□□□ -0.58
SKA1-201ENST00000285116 TMEM119Q4V9L6 283 aa11.46□□□□□ -0.58
SKA1-201ENST00000285116 PPP1R18Q6NYC8 613 aa11.46□□□□□ -0.58
SKA1-201ENST00000285116 LRRC55Q6ZSA7 311 aa11.46□□□□□ -0.58
SKA1-201ENST00000285116 SV2BQ7L1I2 683 aa11.46□□□□□ -0.58
SKA1-201ENST00000285116 GIMAP7Q8NHV1 300 aa11.46□□□□□ -0.58
SKA1-201ENST00000285116 ZNF622Q969S3 477 aaKnown RBP eCLIP11.46□□□□□ -0.587e-12■□□□□ 9.8
SKA1-201ENST00000285116 JPH2Q9BR39 696 aaPredicted RBP11.46□□□□□ -0.58
SKA1-201ENST00000285116 JADE2Q9NQC1 790 aa11.46□□□□□ -0.58
SKA1-201ENST00000285116 LRWD1Q9UFC0 647 aa11.46□□□□□ -0.58
SKA1-201ENST00000285116 LEMD3Q9Y2U8 911 aa11.46□□□□□ -0.58
SKA1-201ENST00000285116 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.45□□□□□ -0.58
SKA1-201ENST00000285116 KLRF2D3W0D1 207 aa11.45□□□□□ -0.58
SKA1-201ENST00000285116 MYO1FO00160 1098 aa11.45□□□□□ -0.58
SKA1-201ENST00000285116 ZNF185O15231 689 aa11.45□□□□□ -0.58
SKA1-201ENST00000285116 TM4SF1P30408 202 aa11.45□□□□□ -0.58
SKA1-201ENST00000285116 RDXP35241 583 aaKnown RBP11.45□□□□□ -0.58
SKA1-201ENST00000285116 MARSP56192 900 aaKnown RBP11.45□□□□□ -0.58
SKA1-201ENST00000285116 TTMPQ5BVD1 217 aa11.45□□□□□ -0.58
SKA1-201ENST00000285116 TTC19Q6DKK2 380 aaPredicted RBP11.45□□□□□ -0.58
SKA1-201ENST00000285116 EIF1ADQ8N9N8 165 aaKnown RBP11.45□□□□□ -0.58
SKA1-201ENST00000285116 SPATA4Q8NEY3 305 aa11.45□□□□□ -0.58
SKA1-201ENST00000285116 RRP36Q96EU6 259 aaKnown RBP11.45□□□□□ -0.58
SKA1-201ENST00000285116 NLRP3Q96P20 1036 aa11.45□□□□□ -0.58
SKA1-201ENST00000285116 OSBPL9Q96SU4 736 aa11.45□□□□□ -0.58
SKA1-201ENST00000285116 RIOX1Q9H6W3 641 aa11.45□□□□□ -0.58
SKA1-201ENST00000285116 NARFQ9UHQ1 456 aa11.45□□□□□ -0.58
SKA1-201ENST00000285116 CEP350Q5VT06 3117 aa11.45□□□□□ -0.58
SKA1-201ENST00000285116 ARFGEF1Q9Y6D6 1849 aa11.45□□□□□ -0.58
SKA1-201ENST00000285116 CES2O00748 559 aa11.45□□□□□ -0.58
SKA1-201ENST00000285116 LDHBP07195 334 aaKnown RBP11.45□□□□□ -0.58
SKA1-201ENST00000285116 NEDD9Q14511 834 aa11.45□□□□□ -0.58
SKA1-201ENST00000285116 PDXDC1Q6P996 788 aa11.45□□□□□ -0.58
SKA1-201ENST00000285116 ZC3H3Q8IXZ2 948 aaKnown RBP11.45□□□□□ -0.58
SKA1-201ENST00000285116 ZNF444Q8N0Y2 327 aaPredicted RBP11.45□□□□□ -0.58
SKA1-201ENST00000285116 MREGQ8N565 214 aa11.45□□□□□ -0.58
SKA1-201ENST00000285116 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.45□□□□□ -0.58
SKA1-201ENST00000285116 MKNK2Q9HBH9 465 aa11.45□□□□□ -0.58
SKA1-201ENST00000285116 TFR2Q9UP52 801 aa11.45□□□□□ -0.58
SKA1-201ENST00000285116 BRCA2P51587 3418 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 GRID2IPA4D2P6 1211 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 BTNL10A8MVZ5 291 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 CCNT1O60563 726 aaKnown RBP11.44□□□□□ -0.58
SKA1-201ENST00000285116 FCER1AP12319 257 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 NAPAP54920 295 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 PDCLQ13371 301 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 PLCB4Q15147 1175 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 ZCWPW2Q504Y3 356 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 HYIQ5T013 277 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 TBC1D9BQ66K14 1250 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 SH3RF3Q8TEJ3 882 aaPredicted RBP11.44□□□□□ -0.58
SKA1-201ENST00000285116 ARL8AQ96BM9 186 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 PNMA5Q96PV4 448 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 CAPN6Q9Y6Q1 641 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 DUSP10Q9Y6W6 482 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 LRRC37AA6NMS7 1700 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 LY75O60449 1722 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 SMCO2A6NFE2 343 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 PES1O00541 588 aaKnown RBP11.44□□□□□ -0.58
SKA1-201ENST00000285116 CCDC96Q2M329 555 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 SLC4A8Q2Y0W8 1093 aa11.44□□□□□ -0.58
SKA1-201ENST00000285116 ARHGEF1Q92888 912 aaKnown RBP11.44□□□□□ -0.58
SKA1-201ENST00000285116 LRRC1Q9BTT6 524 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms