RNA–Protein interactions for RNA: ENST00000284771.6

PDLIM3-203, Transcript of PDZ and LIM domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM3, Length 1,672 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3-203ENST00000284771 CALCRLQ16602 461 aa24.7■■□□□ 1.54
PDLIM3-203ENST00000284771 SEPT14Q6ZU15 432 aa24.7■■□□□ 1.54
PDLIM3-203ENST00000284771 FBXO16Q8IX29 292 aaPredicted RBP24.7■■□□□ 1.54
PDLIM3-203ENST00000284771 CDKN2AIPQ9NXV6 580 aaPredicted RBP24.7■■□□□ 1.54
PDLIM3-203ENST00000284771 CASP8AP2Q9UKL3 1982 aa24.7■■□□□ 1.54
PDLIM3-203ENST00000284771 OLFML2BQ68BL8 750 aa24.69■■□□□ 1.54
PDLIM3-203ENST00000284771 MSL3Q8N5Y2 521 aaKnown RBP24.69■■□□□ 1.54
PDLIM3-203ENST00000284771 GPRASP2Q96D09 838 aa24.69■■□□□ 1.54
PDLIM3-203ENST00000284771 PDGFCQ9NRA1 345 aa24.69■■□□□ 1.54
PDLIM3-203ENST00000284771 FBXO2Q9UK22 296 aaPredicted RBP24.69■■□□□ 1.54
PDLIM3-203ENST00000284771 MORC2Q9Y6X9 1032 aaPredicted RBP24.69■■□□□ 1.54
PDLIM3-203ENST00000284771 SYNGAP1Q96PV0 1343 aa24.69■■□□□ 1.54
PDLIM3-203ENST00000284771 SPATA31C2B4DYI2 1134 aa24.69■■□□□ 1.54
PDLIM3-203ENST00000284771 FOXN1O15353 648 aa24.69■■□□□ 1.54
PDLIM3-203ENST00000284771 PPP6R2O75170 966 aa24.69■■□□□ 1.54
PDLIM3-203ENST00000284771 BMP15O95972 392 aa24.69■■□□□ 1.54
PDLIM3-203ENST00000284771 GNRH1P01148 92 aa24.69■■□□□ 1.54
PDLIM3-203ENST00000284771 OR52Z1P0C646 297 aa24.69■■□□□ 1.54
PDLIM3-203ENST00000284771 CYP2C19P33261 490 aa24.69■■□□□ 1.54
PDLIM3-203ENST00000284771 SP2Q02086 613 aa24.69■■□□□ 1.54
PDLIM3-203ENST00000284771 TRIB2Q92519 343 aa24.69■■□□□ 1.54
PDLIM3-203ENST00000284771 GBP4Q96PP9 640 aa24.69■■□□□ 1.54
PDLIM3-203ENST00000284771 MPHOSPH6Q99547 160 aaKnown RBP24.69■■□□□ 1.54
PDLIM3-203ENST00000284771 BCAS3Q9H6U6 928 aa24.69■■□□□ 1.54
PDLIM3-203ENST00000284771 PCDHA7Q9UN72 937 aa24.69■■□□□ 1.54
PDLIM3-203ENST00000284771 LAD1O00515 517 aa24.68■■□□□ 1.54
PDLIM3-203ENST00000284771 TXKP42681 527 aa24.68■■□□□ 1.54
PDLIM3-203ENST00000284771 SETQ01105 290 aaPredicted RBP24.68■■□□□ 1.54
PDLIM3-203ENST00000284771 PRAMEF19Q5SWL8 479 aa24.68■■□□□ 1.54
PDLIM3-203ENST00000284771 AXDND1Q5T1B0 1012 aaPredicted RBP24.68■■□□□ 1.54
PDLIM3-203ENST00000284771 TMEM63BQ5T3F8 832 aa24.68■■□□□ 1.54
PDLIM3-203ENST00000284771 TAPT1Q6NXT6 567 aa24.68■■□□□ 1.54
PDLIM3-203ENST00000284771 KCNG4Q8TDN1 519 aa24.68■■□□□ 1.54
PDLIM3-203ENST00000284771 CLIC6Q96NY7 704 aa24.68■■□□□ 1.54
PDLIM3-203ENST00000284771 AGO4Q9HCK5 861 aaKnown RBP24.68■■□□□ 1.54
PDLIM3-203ENST00000284771 TBX3O15119 743 aa24.67■■□□□ 1.54
PDLIM3-203ENST00000284771 MAFGO15525 162 aa24.67■■□□□ 1.54
PDLIM3-203ENST00000284771 DHX15O43143 795 aaKnown RBP24.67■■□□□ 1.54
PDLIM3-203ENST00000284771 HOXD10P28358 340 aa24.67■■□□□ 1.54
PDLIM3-203ENST00000284771 ICAM3P32942 547 aa24.67■■□□□ 1.54
PDLIM3-203ENST00000284771 PRPHP41219 470 aa24.67■■□□□ 1.54
PDLIM3-203ENST00000284771 ITGB3BPQ13352 177 aaPredicted RBP24.67■■□□□ 1.54
PDLIM3-203ENST00000284771 IRF5Q13568 498 aa24.67■■□□□ 1.54
PDLIM3-203ENST00000284771 ARL6IP4Q66PJ3 421 aaKnown RBP24.67■■□□□ 1.54
PDLIM3-203ENST00000284771 OTOP1Q7RTM1 612 aa24.67■■□□□ 1.54
PDLIM3-203ENST00000284771 NLRX1Q86UT6 975 aa24.67■■□□□ 1.54
PDLIM3-203ENST00000284771 TMEM87AQ8NBN3 555 aa24.67■■□□□ 1.54
PDLIM3-203ENST00000284771 SLC5A5Q92911 643 aa24.67■■□□□ 1.54
PDLIM3-203ENST00000284771 PKD2L1Q9P0L9 805 aa24.67■■□□□ 1.54
PDLIM3-203ENST00000284771 SRPRBQ9Y5M8 271 aaKnown RBP24.67■■□□□ 1.54
PDLIM3-203ENST00000284771 ELP1O95163 1332 aa24.67■■□□□ 1.54
PDLIM3-203ENST00000284771 IPO5O00410 1097 aaKnown RBP24.66■■□□□ 1.54
PDLIM3-203ENST00000284771 ARIH2O95376 493 aa24.66■■□□□ 1.54
PDLIM3-203ENST00000284771 GNPTABQ3T906 1256 aa24.66■■□□□ 1.54
PDLIM3-203ENST00000284771 FAM20AQ96MK3 541 aa24.66■■□□□ 1.54
PDLIM3-203ENST00000284771 ZNF577Q9BSK1 485 aa24.66■■□□□ 1.54
PDLIM3-203ENST00000284771 PSMD10O75832 226 aa24.66■■□□□ 1.54
PDLIM3-203ENST00000284771 HSPA8P11142 646 aaKnown RBP24.66■■□□□ 1.54
PDLIM3-203ENST00000284771 ME1P48163 572 aa24.66■■□□□ 1.54
PDLIM3-203ENST00000284771 ABHD16BQ9H3Z7 469 aa24.66■■□□□ 1.54
PDLIM3-203ENST00000284771 TTC12Q9H892 705 aaPredicted RBP24.66■■□□□ 1.54
PDLIM3-203ENST00000284771 TRIM17Q9Y577 477 aa24.66■■□□□ 1.54
PDLIM3-203ENST00000284771 DOCK5Q9H7D0 1870 aa24.65■■□□□ 1.54
PDLIM3-203ENST00000284771 VWA3AA6NCI4 1184 aa24.65■■□□□ 1.54
PDLIM3-203ENST00000284771 PRPF40AO75400 957 aaKnown RBP24.65■■□□□ 1.54
PDLIM3-203ENST00000284771 KCNA2P16389 499 aa24.65■■□□□ 1.54
PDLIM3-203ENST00000284771 TECP42680 631 aa24.65■■□□□ 1.54
PDLIM3-203ENST00000284771 SPIRE1Q08AE8 756 aa24.65■■□□□ 1.54
PDLIM3-203ENST00000284771 ACVR2BQ13705 512 aa24.65■■□□□ 1.54
PDLIM3-203ENST00000284771 CCDC62Q6P9F0 684 aa24.65■■□□□ 1.54
PDLIM3-203ENST00000284771 VTA1Q9NP79 307 aa24.65■■□□□ 1.54
PDLIM3-203ENST00000284771 PCDHA12Q9UN75 941 aa24.65■■□□□ 1.54
PDLIM3-203ENST00000284771 GADD45BO75293 160 aaPredicted RBP24.64■■□□□ 1.53
PDLIM3-203ENST00000284771 HSPA1AP0DMV8 641 aaKnown RBP24.64■■□□□ 1.53
PDLIM3-203ENST00000284771 HSPA1BP0DMV9 641 aaKnown RBP24.64■■□□□ 1.53
PDLIM3-203ENST00000284771 ELNP15502 786 aa24.64■■□□□ 1.53
PDLIM3-203ENST00000284771 PTGS1P23219 599 aa24.64■■□□□ 1.53
PDLIM3-203ENST00000284771 TRIM32Q13049 653 aa24.64■■□□□ 1.53
PDLIM3-203ENST00000284771 SPECC1Q5M775 1068 aa24.64■■□□□ 1.53
PDLIM3-203ENST00000284771 DTHD1Q6ZMT9 781 aa24.64■■□□□ 1.53
PDLIM3-203ENST00000284771 KRI1Q8N9T8 703 aaKnown RBP24.64■■□□□ 1.53
PDLIM3-203ENST00000284771 DDX41Q9UJV9 622 aaKnown RBP24.64■■□□□ 1.53
PDLIM3-203ENST00000284771 RBM47A0AV96 593 aaKnown RBP24.63■■□□□ 1.53
PDLIM3-203ENST00000284771 ZNF865P0CJ78 1059 aaPredicted RBP24.63■■□□□ 1.53
PDLIM3-203ENST00000284771 LY6KQ17RY6 165 aa24.63■■□□□ 1.53
PDLIM3-203ENST00000284771 SLFN12Q8IYM2 578 aa24.63■■□□□ 1.53
PDLIM3-203ENST00000284771 FERMT2Q96AC1 680 aa24.63■■□□□ 1.53
PDLIM3-203ENST00000284771 CSRNP2Q9H175 543 aa24.63■■□□□ 1.53
PDLIM3-203ENST00000284771 LMBRD1Q9NUN5 540 aa24.63■■□□□ 1.53
PDLIM3-203ENST00000284771 VAV3Q9UKW4 847 aa24.63■■□□□ 1.53
PDLIM3-203ENST00000284771 TELO2Q9Y4R8 837 aa24.63■■□□□ 1.53
PDLIM3-203ENST00000284771 C11orf97A0A1B0GVM6 126 aaPredicted RBP24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 MARCH6O60337 910 aa24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 TGFB3P10600 412 aa24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 MCM4P33991 863 aa24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 ARHGEF6Q15052 776 aa24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 LRCH2Q5VUJ6 765 aa24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 B3GNT9Q6UX72 402 aa24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 IGSF22Q8N9C0 903 aa24.62■■□□□ 1.53
PDLIM3-203ENST00000284771 CDHR1Q96JP9 859 aa24.62■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms