RNA–Protein interactions for RNA: ENST00000278302.9

TRIM6-201, Transcript of tripartite motif containing 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM6, Length 3,217 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-201ENST00000278302 KIAA1328Q86T90 577 aa8.4□□□□□ -1.07
TRIM6-201ENST00000278302 GRAPLQ8TC17 118 aaPredicted RBP8.4□□□□□ -1.07
TRIM6-201ENST00000278302 MTRQ99707 1265 aa8.4□□□□□ -1.07
TRIM6-201ENST00000278302 ZNF287Q9HBT7 754 aa8.4□□□□□ -1.07
TRIM6-201ENST00000278302 MAD2L2Q9UI95 211 aa8.4□□□□□ -1.07
TRIM6-201ENST00000278302 PCDHA6Q9UN73 950 aa8.4□□□□□ -1.07
TRIM6-201ENST00000278302 GDAQ9Y2T3 454 aa8.4□□□□□ -1.07
TRIM6-201ENST00000278302 PCDHA8Q9Y5H6 950 aa8.4□□□□□ -1.07
TRIM6-201ENST00000278302 FAM107AO95990 144 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 FAM153BP0C7A2 387 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 PRCPP42785 496 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 GUCY2FP51841 1108 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 FAM153CQ494X1 144 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 ANKRD20A8PQ5CZ79 823 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 PAPD7Q5XG87 772 aaKnown RBP8.39□□□□□ -1.07
TRIM6-201ENST00000278302 CDCA2Q69YH5 1023 aaPredicted RBP8.39□□□□□ -1.07
TRIM6-201ENST00000278302 BZW1Q7L1Q6 419 aaKnown RBP8.39□□□□□ -1.07
TRIM6-201ENST00000278302 SLC51AQ86UW1 340 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 C4orf32Q8N8J7 132 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 RPGRQ92834 1020 aaKnown RBP8.39□□□□□ -1.07
TRIM6-201ENST00000278302 TMEM47Q9BQJ4 181 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 VAT1LQ9HCJ6 419 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 DISC1Q9NRI5 854 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 LIMA1Q9UHB6 759 aaKnown RBP8.39□□□□□ -1.07
TRIM6-201ENST00000278302 FAM153AQ9UHL3 310 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 PP2D1A8MPX8 630 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 KLRF2D3W0D1 207 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 SNUPNO95149 360 aaKnown RBP8.39□□□□□ -1.07
TRIM6-201ENST00000278302 MDH1P40925 334 aaKnown RBP8.39□□□□□ -1.07
TRIM6-201ENST00000278302 SCTRP47872 440 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 NAPAP54920 295 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 UBXN1Q04323 297 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 NFIXQ14938 502 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 VPS72Q15906 364 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 GRIK5Q16478 980 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 ZC3H12AQ5D1E8 599 aaKnown RBP8.39□□□□□ -1.07
TRIM6-201ENST00000278302 TCP11X2Q5H9J9 407 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 CAPRIN2Q6IMN6 1127 aaKnown RBP8.39□□□□□ -1.07
TRIM6-201ENST00000278302 CCDC70Q6NSX1 233 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 TYW1BQ6NUM6 668 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 HIBCHQ6NVY1 386 aaPredicted RBP8.39□□□□□ -1.07
TRIM6-201ENST00000278302 KDM7AQ6ZMT4 941 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 GPIHBP1Q8IV16 184 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 CNBD1Q8NA66 436 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 CNKSR2Q8WXI2 1034 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 ANKS1AQ92625 1134 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 CCDC51Q96ER9 411 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 NUP58Q9BVL2 599 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 NOD2Q9HC29 1040 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 DLEC1Q9Y238 1755 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 MYH10P35580 1976 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 KIF4AO95239 1232 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 EPB41P11171 864 aaKnown RBP8.39□□□□□ -1.07
TRIM6-201ENST00000278302 SLC8A1P32418 973 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 RWDD2BP57060 319 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 CYP27A1Q02318 531 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 RBBP5Q15291 538 aaKnown RBP8.39□□□□□ -1.07
TRIM6-201ENST00000278302 PPP1R7Q15435 360 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 CFAP58Q5T655 872 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 SOGA3Q5TF21 947 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 GALNT17Q6IS24 598 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 TCP11Q8WWU5 503 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 IFT81Q8WYA0 676 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 TMEM60Q9H2L4 133 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 CPVLQ9H3G5 476 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 HAUS4Q9H6D7 363 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 MAGEC2Q9UBF1 373 aaPredicted RBP8.39□□□□□ -1.07
TRIM6-201ENST00000278302 CCDC88AQ3V6T2 1871 aa8.39□□□□□ -1.07
TRIM6-201ENST00000278302 H7C1D1 291 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 ATP6V1G2O95670 118 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 CLTAP09496 248 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 TMOD1P28289 359 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 BTDP43251 543 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 NT5C2P49902 561 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 EPHB4P54760 987 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 SLC8A3P57103 927 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 PNMA8AQ86V59 439 aaPredicted RBP8.38□□□□□ -1.07
TRIM6-201ENST00000278302 AMIGO3Q86WK7 504 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 CCDC47Q96A33 483 aaKnown RBP8.38□□□□□ -1.07
TRIM6-201ENST00000278302 RPGRIP1Q96KN7 1286 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 EYA3Q99504 573 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 LZTS2Q9BRK4 669 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 PAGR1Q9BTK6 254 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 TCP11L1Q9NUJ3 509 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 BARHL2Q9NY43 387 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 NFU1Q9UMS0 254 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 CASZ1Q86V15 1759 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 TRIM49BA6NDI0 452 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 STXBP3O00186 592 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 CYTH3O43739 400 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 TOM1O60784 492 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 UFL1O94874 794 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 PARP1P09874 1014 aaKnown RBP8.38□□□□□ -1.07
TRIM6-201ENST00000278302 RASA1P20936 1047 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 PPP4CP60510 307 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 TSR1Q2NL82 804 aaKnown RBP8.38□□□□□ -1.07
TRIM6-201ENST00000278302 LETM2Q2VYF4 491 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 CCDC50Q8IVM0 306 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 MAB21L3Q8N8X9 362 aa8.38□□□□□ -1.07
TRIM6-201ENST00000278302 C3orf20Q8ND61 904 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms