RNA–Protein interactions for RNA: ENST00000272454.10

RGPD5-202, Transcript of RANBP2-like and GRIP domain containing 5, humanhuman

TSL 2 BASIC

Gene RGPD5, Length 2,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD5-202ENST00000272454 SEC24CP53992 1094 aa17.06■□□□□ 0.32
RGPD5-202ENST00000272454 ASTE1Q2TB18 679 aaPredicted RBP17.06■□□□□ 0.32
RGPD5-202ENST00000272454 EMBQ6PCB8 327 aa17.06■□□□□ 0.32
RGPD5-202ENST00000272454 NOX5Q96PH1 765 aa17.06■□□□□ 0.32
RGPD5-202ENST00000272454 DLEC1Q9Y238 1755 aa17.06■□□□□ 0.32
RGPD5-202ENST00000272454 CACNB1Q02641 598 aaPredicted RBP17.05■□□□□ 0.32
RGPD5-202ENST00000272454 EHHADHQ08426 723 aa17.05■□□□□ 0.32
RGPD5-202ENST00000272454 KLHL7Q8IXQ5 586 aa17.05■□□□□ 0.32
RGPD5-202ENST00000272454 CASKIN2Q8WXE0 1202 aa17.05■□□□□ 0.32
RGPD5-202ENST00000272454 AK8Q96MA6 479 aa17.05■□□□□ 0.32
RGPD5-202ENST00000272454 ZMYND12Q9H0C1 365 aa17.05■□□□□ 0.32
RGPD5-202ENST00000272454 CENPHQ9H3R5 247 aa17.05■□□□□ 0.32
RGPD5-202ENST00000272454 CUEDC2Q9H467 287 aa17.05■□□□□ 0.32
RGPD5-202ENST00000272454 PRLRP16471 622 aa17.05■□□□□ 0.32
RGPD5-202ENST00000272454 KLRC1P26715 233 aa17.05■□□□□ 0.32
RGPD5-202ENST00000272454 AMPD3Q01432 767 aa17.05■□□□□ 0.32
RGPD5-202ENST00000272454 CFAP58Q5T655 872 aa17.05■□□□□ 0.32
RGPD5-202ENST00000272454 LRRC55Q6ZSA7 311 aa17.05■□□□□ 0.32
RGPD5-202ENST00000272454 RPAINQ86UA6 219 aa17.05■□□□□ 0.32
RGPD5-202ENST00000272454 PIK3R5Q8WYR1 880 aa17.05■□□□□ 0.32
RGPD5-202ENST00000272454 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.05■□□□□ 0.32
RGPD5-202ENST00000272454 LAD1O00515 517 aa17.04■□□□□ 0.32
RGPD5-202ENST00000272454 LCA5LO95447 670 aa17.04■□□□□ 0.32
RGPD5-202ENST00000272454 RDXP35241 583 aaKnown RBP17.04■□□□□ 0.32
RGPD5-202ENST00000272454 POLR2FP61218 127 aaKnown RBP17.04■□□□□ 0.32
RGPD5-202ENST00000272454 ECM1Q16610 540 aa17.04■□□□□ 0.32
RGPD5-202ENST00000272454 COA7Q96BR5 231 aa17.04■□□□□ 0.32
RGPD5-202ENST00000272454 CABS1Q96KC9 395 aa17.04■□□□□ 0.32
RGPD5-202ENST00000272454 SSBP05455 408 aaKnown RBP eCLIP17.04■□□□□ 0.32
RGPD5-202ENST00000272454 GNAQP50148 359 aa17.04■□□□□ 0.32
RGPD5-202ENST00000272454 RPS8P62241 208 aaKnown RBP17.04■□□□□ 0.32
RGPD5-202ENST00000272454 SATB1Q01826 763 aa17.04■□□□□ 0.32
RGPD5-202ENST00000272454 PPP2R5AQ15172 486 aa17.04■□□□□ 0.32
RGPD5-202ENST00000272454 SF3B3Q15393 1217 aaKnown RBP17.04■□□□□ 0.32
RGPD5-202ENST00000272454 KRT25Q7Z3Z0 450 aa17.04■□□□□ 0.32
RGPD5-202ENST00000272454 NELFCDQ8IXH7 590 aa17.04■□□□□ 0.32
RGPD5-202ENST00000272454 TBC1D5Q92609 795 aa17.04■□□□□ 0.32
RGPD5-202ENST00000272454 LARP4BQ92615 738 aaKnown RBP17.04■□□□□ 0.32
RGPD5-202ENST00000272454 DDX12PQ92771 950 aa17.04■□□□□ 0.32
RGPD5-202ENST00000272454 CD248Q9HCU0 757 aa17.04■□□□□ 0.32
RGPD5-202ENST00000272454 KCNQ2O43526 872 aa17.03■□□□□ 0.32
RGPD5-202ENST00000272454 RASA1P20936 1047 aa17.03■□□□□ 0.32
RGPD5-202ENST00000272454 ITIH3Q06033 890 aa17.03■□□□□ 0.32
RGPD5-202ENST00000272454 CFAP221Q4G0U5 840 aa17.03■□□□□ 0.32
RGPD5-202ENST00000272454 ALS2CLQ60I27 953 aa17.03■□□□□ 0.32
RGPD5-202ENST00000272454 CNPY4Q8N129 248 aa17.03■□□□□ 0.32
RGPD5-202ENST00000272454 OR2W6PQ8NHA6 318 aa17.03■□□□□ 0.32
RGPD5-202ENST00000272454 CAVIN3Q969G5 261 aa17.03■□□□□ 0.32
RGPD5-202ENST00000272454 CDK5RAP3Q96JB5 506 aa17.03■□□□□ 0.32
RGPD5-202ENST00000272454 LSM14BQ9BX40 385 aaKnown RBP17.03■□□□□ 0.32
RGPD5-202ENST00000272454 FRMPD2Q68DX3 1309 aaPredicted RBP17.03■□□□□ 0.32
RGPD5-202ENST00000272454 NOL4O94818 638 aa17.03■□□□□ 0.32
RGPD5-202ENST00000272454 KIAA0754O94854 1291 aa17.03■□□□□ 0.32
RGPD5-202ENST00000272454 TBC1D9BQ66K14 1250 aa17.03■□□□□ 0.32
RGPD5-202ENST00000272454 UNC13DQ70J99 1090 aa17.03■□□□□ 0.32
RGPD5-202ENST00000272454 IQCKQ8N0W5 287 aa17.03■□□□□ 0.32
RGPD5-202ENST00000272454 MYH14Q7Z406 1995 aaKnown RBP17.03■□□□□ 0.32
RGPD5-202ENST00000272454 EDIL3O43854 480 aa17.03■□□□□ 0.32
RGPD5-202ENST00000272454 HPDP32754 393 aaPredicted RBP17.03■□□□□ 0.32
RGPD5-202ENST00000272454 CALCRLQ16602 461 aa17.03■□□□□ 0.32
RGPD5-202ENST00000272454 IFT20Q8IY31 132 aa17.03■□□□□ 0.32
RGPD5-202ENST00000272454 MAGEF1Q9HAY2 307 aa17.03■□□□□ 0.32
RGPD5-202ENST00000272454 ADAMTS1Q9UHI8 967 aa17.03■□□□□ 0.32
RGPD5-202ENST00000272454 TRAF5O00463 557 aa17.02■□□□□ 0.32
RGPD5-202ENST00000272454 PJA2O43164 708 aa17.02■□□□□ 0.32
RGPD5-202ENST00000272454 EPB41P11171 864 aaKnown RBP17.02■□□□□ 0.32
RGPD5-202ENST00000272454 SKOR1P84550 965 aa17.02■□□□□ 0.32
RGPD5-202ENST00000272454 CCDC40Q4G0X9 1142 aa17.02■□□□□ 0.32
RGPD5-202ENST00000272454 FAM83BQ5T0W9 1011 aa17.02■□□□□ 0.32
RGPD5-202ENST00000272454 SOGA3Q5TF21 947 aa17.02■□□□□ 0.32
RGPD5-202ENST00000272454 CCDC84Q86UT8 332 aaPredicted RBP17.02■□□□□ 0.32
RGPD5-202ENST00000272454 DDX42Q86XP3 938 aaKnown RBP eCLIP17.02■□□□□ 0.32
RGPD5-202ENST00000272454 OTUD6BQ8N6M0 293 aa17.02■□□□□ 0.32
RGPD5-202ENST00000272454 SNX29Q8TEQ0 813 aa17.02■□□□□ 0.32
RGPD5-202ENST00000272454 C6orf50Q9HD87 102 aa17.02■□□□□ 0.32
RGPD5-202ENST00000272454 GDF3Q9NR23 364 aa17.02■□□□□ 0.32
RGPD5-202ENST00000272454 A0A087X0T9 212 aa17.02■□□□□ 0.31
RGPD5-202ENST00000272454 BACH1O14867 736 aa17.02■□□□□ 0.31
RGPD5-202ENST00000272454 RAD51CO43502 376 aa17.02■□□□□ 0.31
RGPD5-202ENST00000272454 FAM228BP0C875 321 aa17.02■□□□□ 0.31
RGPD5-202ENST00000272454 LSP1P33241 339 aa17.02■□□□□ 0.31
RGPD5-202ENST00000272454 RAPGEF1Q13905 1077 aa17.02■□□□□ 0.31
RGPD5-202ENST00000272454 PRPF38AQ8NAV1 312 aaKnown RBP17.02■□□□□ 0.31
RGPD5-202ENST00000272454 NPHP3-ACAD11A0A0J9YXS1 232 aa17.01■□□□□ 0.31
RGPD5-202ENST00000272454 USP17L5A8MUK1 530 aa17.01■□□□□ 0.31
RGPD5-202ENST00000272454 GALNT17Q6IS24 598 aa17.01■□□□□ 0.31
RGPD5-202ENST00000272454 MAATS1Q7Z4T9 603 aa17.01■□□□□ 0.31
RGPD5-202ENST00000272454 CLEC10AQ8IUN9 316 aa17.01■□□□□ 0.31
RGPD5-202ENST00000272454 FAM133AQ8N9E0 248 aa17.01■□□□□ 0.31
RGPD5-202ENST00000272454 ANKS1AQ92625 1134 aa17.01■□□□□ 0.31
RGPD5-202ENST00000272454 EIF6P56537 245 aaKnown RBP17.01■□□□□ 0.31
RGPD5-202ENST00000272454 REXO1Q8N1G1 1221 aaKnown RBP17.01■□□□□ 0.31
RGPD5-202ENST00000272454 GUF1Q8N442 669 aaKnown RBP17.01■□□□□ 0.31
RGPD5-202ENST00000272454 ZNF335Q9H4Z2 1342 aaPredicted RBP17.01■□□□□ 0.31
RGPD5-202ENST00000272454 KIAA0753Q2KHM9 967 aa17■□□□□ 0.31
RGPD5-202ENST00000272454 SFMBT2Q5VUG0 894 aa17■□□□□ 0.31
RGPD5-202ENST00000272454 N4BP2L2Q92802 583 aaPredicted RBP17■□□□□ 0.31
RGPD5-202ENST00000272454 SRP68Q9UHB9 627 aaKnown RBP17■□□□□ 0.31
RGPD5-202ENST00000272454 ZNF652Q9Y2D9 606 aa17■□□□□ 0.31
RGPD5-202ENST00000272454 ECM2O94769 699 aaPredicted RBP17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms