RNA–Protein interactions for RNA: ENST00000269886.7

SH3GL1-201, Transcript of SH3 domain containing GRB2 like 1, endophilin A2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH3GL1, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3GL1-201ENST00000269886 PPP1R18Q6NYC8 613 aa26.66■■□□□ 1.86
SH3GL1-201ENST00000269886 ANKRD13CQ8N6S4 541 aa26.66■■□□□ 1.86
SH3GL1-201ENST00000269886 FAM71BQ8TC56 605 aa26.66■■□□□ 1.86
SH3GL1-201ENST00000269886 LRRC27Q9C0I9 530 aa26.66■■□□□ 1.86
SH3GL1-201ENST00000269886 PSTPIP2Q9H939 334 aa26.66■■□□□ 1.86
SH3GL1-201ENST00000269886 PANK4Q9NVE7 773 aa26.66■■□□□ 1.86
SH3GL1-201ENST00000269886 MCM3P25205 808 aa26.65■■□□□ 1.86
SH3GL1-201ENST00000269886 PSMB7Q99436 277 aa26.65■■□□□ 1.86
SH3GL1-201ENST00000269886 SALL4Q9UJQ4 1053 aa26.65■■□□□ 1.86
SH3GL1-201ENST00000269886 E9PMD0 336 aa26.65■■□□□ 1.86
SH3GL1-201ENST00000269886 TRAF5O00463 557 aa26.65■■□□□ 1.86
SH3GL1-201ENST00000269886 MRPL12P52815 198 aaKnown RBP26.65■■□□□ 1.86
SH3GL1-201ENST00000269886 GFPT1Q06210 699 aaPredicted RBP26.65■■□□□ 1.86
SH3GL1-201ENST00000269886 ZCWPW2Q504Y3 356 aa26.65■■□□□ 1.86
SH3GL1-201ENST00000269886 CACNA2D4Q7Z3S7 1137 aa26.65■■□□□ 1.86
SH3GL1-201ENST00000269886 NLRC4Q9NPP4 1024 aa26.65■■□□□ 1.86
SH3GL1-201ENST00000269886 ZBTB5O15062 677 aa26.64■■□□□ 1.86
SH3GL1-201ENST00000269886 CACNB1Q02641 598 aaPredicted RBP26.64■■□□□ 1.86
SH3GL1-201ENST00000269886 MAP9Q49MG5 647 aa26.64■■□□□ 1.86
SH3GL1-201ENST00000269886 ACBD3Q9H3P7 528 aa26.64■■□□□ 1.86
SH3GL1-201ENST00000269886 USP17L15C9J2P7 530 aa26.64■■□□□ 1.85
SH3GL1-201ENST00000269886 USP17L13C9JLJ4 530 aa26.64■■□□□ 1.85
SH3GL1-201ENST00000269886 USP17L11C9JVI0 530 aa26.64■■□□□ 1.85
SH3GL1-201ENST00000269886 USP17L18D6R9N7 530 aa26.64■■□□□ 1.85
SH3GL1-201ENST00000269886 USP17L22D6RA61 530 aa26.64■■□□□ 1.85
SH3GL1-201ENST00000269886 USP17L17D6RBQ6 530 aa26.64■■□□□ 1.85
SH3GL1-201ENST00000269886 USP17L19D6RCP7 530 aa26.64■■□□□ 1.85
SH3GL1-201ENST00000269886 USP17L20D6RJB6 530 aa26.64■■□□□ 1.85
SH3GL1-201ENST00000269886 MAGEA1P43355 309 aa26.64■■□□□ 1.85
SH3GL1-201ENST00000269886 USP17L24Q0WX57 530 aa26.64■■□□□ 1.85
SH3GL1-201ENST00000269886 FAM26FQ5R3K3 315 aa26.64■■□□□ 1.85
SH3GL1-201ENST00000269886 PDXDC1Q6P996 788 aa26.64■■□□□ 1.85
SH3GL1-201ENST00000269886 USP17L6PQ6QN14 398 aa26.64■■□□□ 1.85
SH3GL1-201ENST00000269886 CRAMP1Q96RY5 1269 aa26.64■■□□□ 1.85
SH3GL1-201ENST00000269886 HPCAL4Q9UM19 191 aa26.64■■□□□ 1.85
SH3GL1-201ENST00000269886 MYH7BA7E2Y1 1941 aa26.63■■□□□ 1.85
SH3GL1-201ENST00000269886 NPHP3-ACAD11A0A0J9YXS1 232 aa26.63■■□□□ 1.85
SH3GL1-201ENST00000269886 RAD21O60216 631 aa26.63■■□□□ 1.85
SH3GL1-201ENST00000269886 CXCR5P32302 372 aa26.63■■□□□ 1.85
SH3GL1-201ENST00000269886 NFRKBQ6P4R8 1299 aa26.63■■□□□ 1.85
SH3GL1-201ENST00000269886 TRERF1Q96PN7 1200 aa26.63■■□□□ 1.85
SH3GL1-201ENST00000269886 VIPAS39Q9H9C1 493 aa26.63■■□□□ 1.85
SH3GL1-201ENST00000269886 KANSL2Q9H9L4 492 aa26.63■■□□□ 1.85
SH3GL1-201ENST00000269886 KIAA1024Q9UPX6 916 aa26.63■■□□□ 1.85
SH3GL1-201ENST00000269886 COL4A3BPQ9Y5P4 624 aa26.63■■□□□ 1.85
SH3GL1-201ENST00000269886 EP400Q96L91 3159 aa26.63■■□□□ 1.85
SH3GL1-201ENST00000269886 FKBP3Q00688 224 aaKnown RBP26.63■■□□□ 1.85
SH3GL1-201ENST00000269886 RAD51AP2Q09MP3 1159 aa26.63■■□□□ 1.85
SH3GL1-201ENST00000269886 EZH2Q15910 746 aaKnown RBP26.63■■□□□ 1.85
SH3GL1-201ENST00000269886 CCDC40Q4G0X9 1142 aa26.63■■□□□ 1.85
SH3GL1-201ENST00000269886 CCNI2Q6ZMN8 369 aaPredicted RBP26.63■■□□□ 1.85
SH3GL1-201ENST00000269886 NELFCDQ8IXH7 590 aa26.63■■□□□ 1.85
SH3GL1-201ENST00000269886 MED4Q9NPJ6 270 aa26.63■■□□□ 1.85
SH3GL1-201ENST00000269886 SWAP70Q9UH65 585 aa26.63■■□□□ 1.85
SH3GL1-201ENST00000269886 PPEF1O14829 653 aaPredicted RBP26.62■■□□□ 1.85
SH3GL1-201ENST00000269886 SYF2O95926 243 aaKnown RBP26.62■■□□□ 1.85
SH3GL1-201ENST00000269886 CAPN2P17655 700 aa26.62■■□□□ 1.85
SH3GL1-201ENST00000269886 PROM2Q8N271 834 aa26.62■■□□□ 1.85
SH3GL1-201ENST00000269886 COA1Q9GZY4 146 aa26.62■■□□□ 1.85
SH3GL1-201ENST00000269886 SMARCAL1Q9NZC9 954 aa26.62■■□□□ 1.85
SH3GL1-201ENST00000269886 MYH10P35580 1976 aa26.62■■□□□ 1.85
SH3GL1-201ENST00000269886 MRPS25P82663 173 aaKnown RBP26.62■■□□□ 1.85
SH3GL1-201ENST00000269886 RASSF7Q02833 373 aa26.62■■□□□ 1.85
SH3GL1-201ENST00000269886 DOK7Q18PE1 504 aa26.62■■□□□ 1.85
SH3GL1-201ENST00000269886 ASTE1Q2TB18 679 aaPredicted RBP26.62■■□□□ 1.85
SH3GL1-201ENST00000269886 MUM1L1Q5H9M0 696 aa26.62■■□□□ 1.85
SH3GL1-201ENST00000269886 GPATCH4Q5T3I0 446 aaKnown RBP26.62■■□□□ 1.85
SH3GL1-201ENST00000269886 HGSNATQ68CP4 663 aa26.62■■□□□ 1.85
SH3GL1-201ENST00000269886 HDAC7Q8WUI4 952 aa26.62■■□□□ 1.85
SH3GL1-201ENST00000269886 NCK2O43639 380 aa26.61■■□□□ 1.85
SH3GL1-201ENST00000269886 APBA1Q02410 837 aa26.61■■□□□ 1.85
SH3GL1-201ENST00000269886 CDC42EP5Q6NZY7 148 aa26.61■■□□□ 1.85
SH3GL1-201ENST00000269886 OSBPL9Q96SU4 736 aa26.61■■□□□ 1.85
SH3GL1-201ENST00000269886 EHD2Q9NZN4 543 aa26.61■■□□□ 1.85
SH3GL1-201ENST00000269886 AFF2P51816 1311 aa26.61■■□□□ 1.85
SH3GL1-201ENST00000269886 POTEB3A0JP26 581 aa26.61■■□□□ 1.85
SH3GL1-201ENST00000269886 POTECB2RU33 542 aa26.61■■□□□ 1.85
SH3GL1-201ENST00000269886 SLC1A4P43007 532 aa26.61■■□□□ 1.85
SH3GL1-201ENST00000269886 NFIAQ12857 509 aa26.61■■□□□ 1.85
SH3GL1-201ENST00000269886 TDRD12Q587J7 1177 aaKnown RBP26.61■■□□□ 1.85
SH3GL1-201ENST00000269886 IQCEQ6IPM2 695 aa26.61■■□□□ 1.85
SH3GL1-201ENST00000269886 POTEBQ6S5H4 581 aa26.61■■□□□ 1.85
SH3GL1-201ENST00000269886 RIN2Q8WYP3 895 aaPredicted RBP26.61■■□□□ 1.85
SH3GL1-201ENST00000269886 GJD4Q96KN9 370 aaPredicted RBP26.61■■□□□ 1.85
SH3GL1-201ENST00000269886 ATF5Q9Y2D1 282 aaPredicted RBP26.61■■□□□ 1.85
SH3GL1-201ENST00000269886 ZC3H4Q9UPT8 1303 aaKnown RBP26.6■■□□□ 1.85
SH3GL1-201ENST00000269886 POLRMTO00411 1230 aaKnown RBP26.6■■□□□ 1.85
SH3GL1-201ENST00000269886 RNF40O75150 1001 aa26.6■■□□□ 1.85
SH3GL1-201ENST00000269886 NOL4O94818 638 aa26.6■■□□□ 1.85
SH3GL1-201ENST00000269886 ACTN2P35609 894 aa26.6■■□□□ 1.85
SH3GL1-201ENST00000269886 MATR3P43243 847 aaKnown RBP eCLIP26.6■■□□□ 1.855e-13■■■■□ 22
SH3GL1-201ENST00000269886 AARSP49588 968 aaKnown RBP eCLIP26.6■■□□□ 1.858e-6■■■■■ 52.4
SH3GL1-201ENST00000269886 SHROOM1Q2M3G4 852 aaPredicted RBP26.6■■□□□ 1.85
SH3GL1-201ENST00000269886 SP8Q8IXZ3 490 aa26.6■■□□□ 1.85
SH3GL1-201ENST00000269886 MTMR8Q96EF0 704 aa26.6■■□□□ 1.85
SH3GL1-201ENST00000269886 CRACR2AQ9BSW2 395 aa26.6■■□□□ 1.85
SH3GL1-201ENST00000269886 LRRC1Q9BTT6 524 aa26.6■■□□□ 1.85
SH3GL1-201ENST00000269886 SELENOOQ9BVL4 669 aa26.6■■□□□ 1.85
SH3GL1-201ENST00000269886 FAM204AQ9H8W3 233 aa26.6■■□□□ 1.85
SH3GL1-201ENST00000269886 BMP2KQ9NSY1 1161 aaPredicted RBP26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms