RNA–Protein interactions for RNA: ENST00000269361.11

CSNK1D-201, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 1,088 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-201ENST00000269361 GPNMBQ14956 572 aa20.23■□□□□ 0.83
CSNK1D-201ENST00000269361 CASC1Q6TDU7 716 aa20.23■□□□□ 0.83
CSNK1D-201ENST00000269361 LRRC8DQ7L1W4 858 aa20.23■□□□□ 0.83
CSNK1D-201ENST00000269361 ZNF654Q8IZM8 581 aa20.23■□□□□ 0.83
CSNK1D-201ENST00000269361 CTCFLQ8NI51 663 aaPredicted RBP20.23■□□□□ 0.83
CSNK1D-201ENST00000269361 GPKOWQ92917 476 aaPredicted RBP eCLIP20.23■□□□□ 0.83
CSNK1D-201ENST00000269361 MTA3Q9BTC8 594 aa20.23■□□□□ 0.83
CSNK1D-201ENST00000269361 MYL10Q9BUA6 226 aa20.23■□□□□ 0.83
CSNK1D-201ENST00000269361 SPZ1Q9BXG8 430 aa20.23■□□□□ 0.83
CSNK1D-201ENST00000269361 LSG1Q9H089 658 aaKnown RBP20.23■□□□□ 0.83
CSNK1D-201ENST00000269361 MLXIPQ9HAP2 919 aa20.23■□□□□ 0.83
CSNK1D-201ENST00000269361 BAIAP3O94812 1187 aa20.22■□□□□ 0.83
CSNK1D-201ENST00000269361 CA3P07451 260 aa20.22■□□□□ 0.83
CSNK1D-201ENST00000269361 CKBP12277 381 aa20.22■□□□□ 0.83
CSNK1D-201ENST00000269361 SMARCA1P28370 1054 aa20.22■□□□□ 0.83
CSNK1D-201ENST00000269361 MCM5P33992 734 aa20.22■□□□□ 0.83
CSNK1D-201ENST00000269361 PTK7Q13308 1070 aa20.22■□□□□ 0.83
CSNK1D-201ENST00000269361 HERC6Q8IVU3 1022 aa20.22■□□□□ 0.83
CSNK1D-201ENST00000269361 TMTC2Q8N394 836 aa20.22■□□□□ 0.83
CSNK1D-201ENST00000269361 SYMPKQ92797 1274 aaKnown RBP20.22■□□□□ 0.83
CSNK1D-201ENST00000269361 RRP36Q96EU6 259 aaKnown RBP20.22■□□□□ 0.83
CSNK1D-201ENST00000269361 PRDM6Q9NQX0 595 aa20.22■□□□□ 0.83
CSNK1D-201ENST00000269361 CHD7Q9P2D1 2997 aa20.21■□□□□ 0.83
CSNK1D-201ENST00000269361 PARNO95453 639 aaKnown RBP20.21■□□□□ 0.83
CSNK1D-201ENST00000269361 MRPS9P82933 396 aaKnown RBP20.21■□□□□ 0.83
CSNK1D-201ENST00000269361 ZNF200P98182 395 aaPredicted RBP20.21■□□□□ 0.83
CSNK1D-201ENST00000269361 CCDC85BQ15834 202 aaPredicted RBP20.21■□□□□ 0.83
CSNK1D-201ENST00000269361 NFXL1Q6ZNB6 911 aa20.21■□□□□ 0.83
CSNK1D-201ENST00000269361 LZTS2Q9BRK4 669 aa20.21■□□□□ 0.83
CSNK1D-201ENST00000269361 ESYT1Q9BSJ8 1104 aa20.21■□□□□ 0.83
CSNK1D-201ENST00000269361 C16orf70Q9BSU1 422 aa20.21■□□□□ 0.83
CSNK1D-201ENST00000269361 FRMPD4Q14CM0 1322 aa20.21■□□□□ 0.83
CSNK1D-201ENST00000269361 SPATA31C2B4DYI2 1134 aa20.2■□□□□ 0.82
CSNK1D-201ENST00000269361 KIF28PB7ZC32 967 aa20.2■□□□□ 0.82
CSNK1D-201ENST00000269361 SH2B2O14492 632 aaPredicted RBP20.2■□□□□ 0.82
CSNK1D-201ENST00000269361 SLC27A2O14975 620 aa20.2■□□□□ 0.82
CSNK1D-201ENST00000269361 STAM2O75886 525 aa20.2■□□□□ 0.82
CSNK1D-201ENST00000269361 CXCL10P02778 98 aa20.2■□□□□ 0.82
CSNK1D-201ENST00000269361 ICAM3P32942 547 aa20.2■□□□□ 0.82
CSNK1D-201ENST00000269361 GNAQP50148 359 aa20.2■□□□□ 0.82
CSNK1D-201ENST00000269361 TRIM71Q2Q1W2 868 aaKnown RBP20.2■□□□□ 0.82
CSNK1D-201ENST00000269361 GNPTABQ3T906 1256 aa20.2■□□□□ 0.82
CSNK1D-201ENST00000269361 TJAP1Q5JTD0 557 aa20.2■□□□□ 0.82
CSNK1D-201ENST00000269361 TMEM87BQ96K49 555 aa20.2■□□□□ 0.82
CSNK1D-201ENST00000269361 INPP4AQ96PE3 977 aaPredicted RBP20.2■□□□□ 0.82
CSNK1D-201ENST00000269361 BCAS3Q9H6U6 928 aa20.2■□□□□ 0.82
CSNK1D-201ENST00000269361 SEC63Q9UGP8 760 aaKnown RBP20.2■□□□□ 0.82
CSNK1D-201ENST00000269361 SPTBN5Q9NRC6 3674 aaKnown RBP20.2■□□□□ 0.82
CSNK1D-201ENST00000269361 CCDC69A6NI79 296 aa20.19■□□□□ 0.82
CSNK1D-201ENST00000269361 NBNO60934 754 aa20.19■□□□□ 0.82
CSNK1D-201ENST00000269361 KCNJ6P48051 423 aa20.19■□□□□ 0.82
CSNK1D-201ENST00000269361 COL9A3Q14050 684 aaPredicted RBP20.19■□□□□ 0.82
CSNK1D-201ENST00000269361 HIC1Q14526 733 aa20.19■□□□□ 0.82
CSNK1D-201ENST00000269361 USP17L6PQ6QN14 398 aa20.19■□□□□ 0.82
CSNK1D-201ENST00000269361 SRBD1Q8N5C6 995 aaKnown RBP20.19■□□□□ 0.82
CSNK1D-201ENST00000269361 SMARCC2Q8TAQ2 1214 aa20.19■□□□□ 0.82
CSNK1D-201ENST00000269361 CUL5Q93034 780 aa20.19■□□□□ 0.82
CSNK1D-201ENST00000269361 WNT8BQ93098 351 aa20.19■□□□□ 0.82
CSNK1D-201ENST00000269361 RTEL1Q9NZ71 1219 aa20.19■□□□□ 0.82
CSNK1D-201ENST00000269361 H3BRB1 525 aa20.18■□□□□ 0.82
CSNK1D-201ENST00000269361 PIK3CDO00329 1044 aa20.18■□□□□ 0.82
CSNK1D-201ENST00000269361 PLEKHA8P1O95397 391 aa20.18■□□□□ 0.82
CSNK1D-201ENST00000269361 LIFRP42702 1097 aa20.18■□□□□ 0.82
CSNK1D-201ENST00000269361 WDR5P61964 334 aaKnown RBP20.18■□□□□ 0.82
CSNK1D-201ENST00000269361 NEDD9Q14511 834 aa20.18■□□□□ 0.82
CSNK1D-201ENST00000269361 NECTIN1Q15223 517 aa20.18■□□□□ 0.82
CSNK1D-201ENST00000269361 ZNF618Q5T7W0 954 aa20.18■□□□□ 0.82
CSNK1D-201ENST00000269361 CREB3L3Q68CJ9 461 aa20.18■□□□□ 0.82
CSNK1D-201ENST00000269361 CNKSR3Q6P9H4 555 aa20.18■□□□□ 0.82
CSNK1D-201ENST00000269361 TRAF7Q6Q0C0 670 aa20.18■□□□□ 0.82
CSNK1D-201ENST00000269361 ATXN2LQ8WWM7 1075 aaKnown RBP20.18■□□□□ 0.82
CSNK1D-201ENST00000269361 TUT1Q9H6E5 874 aaKnown RBP20.18■□□□□ 0.82
CSNK1D-201ENST00000269361 NOP56O00567 594 aaKnown RBP20.17■□□□□ 0.82
CSNK1D-201ENST00000269361 MEIS2O14770 477 aa20.17■□□□□ 0.82
CSNK1D-201ENST00000269361 FIBPO43427 364 aa20.17■□□□□ 0.82
CSNK1D-201ENST00000269361 CALM1P0DP23 149 aa20.17■□□□□ 0.82
CSNK1D-201ENST00000269361 CALM2P0DP24 149 aa20.17■□□□□ 0.82
CSNK1D-201ENST00000269361 CALM3P0DP25 149 aa20.17■□□□□ 0.82
CSNK1D-201ENST00000269361 TAP1Q03518 808 aa20.17■□□□□ 0.82
CSNK1D-201ENST00000269361 SEMA3FQ13275 785 aa20.17■□□□□ 0.82
CSNK1D-201ENST00000269361 PCNX4Q63HM2 1172 aa20.17■□□□□ 0.82
CSNK1D-201ENST00000269361 XRRA1Q6P2D8 792 aa20.17■□□□□ 0.82
CSNK1D-201ENST00000269361 METTL7BQ6UX53 244 aa20.17■□□□□ 0.82
CSNK1D-201ENST00000269361 CYFIP1Q7L576 1253 aa20.17■□□□□ 0.82
CSNK1D-201ENST00000269361 CMTR1Q8N1G2 835 aaKnown RBP20.17■□□□□ 0.82
CSNK1D-201ENST00000269361 CERS4Q9HA82 394 aa20.17■□□□□ 0.82
CSNK1D-201ENST00000269361 ANO2Q9NQ90 1003 aa20.17■□□□□ 0.82
CSNK1D-201ENST00000269361 THEGQ9P2T0 379 aa20.17■□□□□ 0.82
CSNK1D-201ENST00000269361 KIAA1217Q5T5P2 1943 aa20.17■□□□□ 0.82
CSNK1D-201ENST00000269361 ABHD14A-ACY1A0A1B0GW23 586 aa20.16■□□□□ 0.82
CSNK1D-201ENST00000269361 C17orf102A2RUQ5 167 aa20.16■□□□□ 0.82
CSNK1D-201ENST00000269361 RFXAPO00287 272 aa20.16■□□□□ 0.82
CSNK1D-201ENST00000269361 TLL1O43897 1013 aa20.16■□□□□ 0.82
CSNK1D-201ENST00000269361 ARHGEF15O94989 841 aa20.16■□□□□ 0.82
CSNK1D-201ENST00000269361 LGALS2P05162 132 aa20.16■□□□□ 0.82
CSNK1D-201ENST00000269361 RXRAP19793 462 aa20.16■□□□□ 0.82
CSNK1D-201ENST00000269361 TCTN1Q2MV58 587 aa20.16■□□□□ 0.82
CSNK1D-201ENST00000269361 SERINC5Q86VE9 423 aa20.16■□□□□ 0.82
CSNK1D-201ENST00000269361 USP26Q9BXU7 913 aa20.16■□□□□ 0.82
CSNK1D-201ENST00000269361 SLC12A7Q9Y666 1083 aa20.16■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms