RNA–Protein interactions for RNA: ENST00000268717.9

COPS3-201, Transcript of COP9 signalosome subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPS3, Length 1,641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-201ENST00000268717 SLC45A1Q9Y2W3 748 aa17.27■□□□□ 0.36
COPS3-201ENST00000268717 A0A087WWV3 80 aa17.26■□□□□ 0.35
COPS3-201ENST00000268717 AP5Z1O43299 807 aa17.26■□□□□ 0.35
COPS3-201ENST00000268717 CDC25AP30304 524 aa17.26■□□□□ 0.35
COPS3-201ENST00000268717 CDC25BP30305 580 aa17.26■□□□□ 0.35
COPS3-201ENST00000268717 AFMP43652 599 aa17.26■□□□□ 0.35
COPS3-201ENST00000268717 MYL5Q02045 173 aa17.26■□□□□ 0.35
COPS3-201ENST00000268717 HYIQ5T013 277 aa17.26■□□□□ 0.35
COPS3-201ENST00000268717 KRT79Q5XKE5 535 aa17.26■□□□□ 0.35
COPS3-201ENST00000268717 PLA2G4DQ86XP0 818 aa17.26■□□□□ 0.35
COPS3-201ENST00000268717 PROCA1Q8NCQ7 364 aaPredicted RBP17.26■□□□□ 0.35
COPS3-201ENST00000268717 ETNPPLQ8TBG4 499 aa17.26■□□□□ 0.35
COPS3-201ENST00000268717 ERO1AQ96HE7 468 aa17.26■□□□□ 0.35
COPS3-201ENST00000268717 MTRQ99707 1265 aa17.26■□□□□ 0.35
COPS3-201ENST00000268717 PCDHA12Q9UN75 941 aa17.26■□□□□ 0.35
COPS3-201ENST00000268717 ADGRA2Q96PE1 1338 aa17.26■□□□□ 0.35
COPS3-201ENST00000268717 CFBP00751 764 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 PLCG1P19174 1290 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 ERCC5P28715 1186 aaPredicted RBP17.25■□□□□ 0.35
COPS3-201ENST00000268717 HMGCS2P54868 508 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 NCAPHQ15003 741 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 PKN2Q16513 984 aaKnown RBP17.25■□□□□ 0.35
COPS3-201ENST00000268717 CD99L2Q8TCZ2 262 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 LENG9Q96B70 501 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 PARK7Q99497 189 aaKnown RBP17.25■□□□□ 0.35
COPS3-201ENST00000268717 TMOD4Q9NZQ9 345 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 ADAMTS5Q9UNA0 930 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 AGTPBP1Q9UPW5 1226 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 KDM3AQ9Y4C1 1321 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 HTTP42858 3142 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 ATP2A1O14983 1001 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 MARCH6O60337 910 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 CAPN15O75808 1086 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 HOXA13P31271 388 aaPredicted RBP17.25■□□□□ 0.35
COPS3-201ENST00000268717 AMPD3Q01432 767 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 KCNB1Q14721 858 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 TMEM119Q4V9L6 283 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 TREML2Q5T2D2 321 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 C17orf99Q6UX52 265 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 KCTD17Q8N5Z5 321 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 MRFAP1L1Q96HT8 127 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 ZSWIM8A7E2V4 1837 aa17.25■□□□□ 0.35
COPS3-201ENST00000268717 VWA5AO00534 786 aa17.24■□□□□ 0.35
COPS3-201ENST00000268717 CYP2C8P10632 490 aa17.24■□□□□ 0.35
COPS3-201ENST00000268717 HOXA7P31268 230 aaPredicted RBP17.24■□□□□ 0.35
COPS3-201ENST00000268717 ZNF75DP51815 510 aa17.24■□□□□ 0.35
COPS3-201ENST00000268717 CAP1Q01518 475 aa17.24■□□□□ 0.35
COPS3-201ENST00000268717 OTOP1Q7RTM1 612 aa17.24■□□□□ 0.35
COPS3-201ENST00000268717 ENOX1Q8TC92 643 aaKnown RBP17.24■□□□□ 0.35
COPS3-201ENST00000268717 CLEC4DQ8WXI8 215 aa17.24■□□□□ 0.35
COPS3-201ENST00000268717 AGBL1Q96MI9 1066 aa17.24■□□□□ 0.35
COPS3-201ENST00000268717 LRRC27Q9C0I9 530 aa17.24■□□□□ 0.35
COPS3-201ENST00000268717 NT5C3AQ9H0P0 336 aa17.24■□□□□ 0.35
COPS3-201ENST00000268717 CTDP1Q9Y5B0 961 aaPredicted RBP17.24■□□□□ 0.35
COPS3-201ENST00000268717 FAM86B1E9PN63 330 aa17.23■□□□□ 0.35
COPS3-201ENST00000268717 FAM86B2P0C5J1 330 aa17.23■□□□□ 0.35
COPS3-201ENST00000268717 DSG3P32926 999 aa17.23■□□□□ 0.35
COPS3-201ENST00000268717 PLCB2Q00722 1185 aa17.23■□□□□ 0.35
COPS3-201ENST00000268717 SETQ01105 290 aaPredicted RBP17.23■□□□□ 0.35
COPS3-201ENST00000268717 GRB10Q13322 594 aa17.23■□□□□ 0.35
COPS3-201ENST00000268717 CUL4BQ13620 913 aa17.23■□□□□ 0.35
COPS3-201ENST00000268717 CNNM4Q6P4Q7 775 aa17.23■□□□□ 0.35
COPS3-201ENST00000268717 SAMD1Q6SPF0 538 aaPredicted RBP17.23■□□□□ 0.35
COPS3-201ENST00000268717 CATSPERGQ6ZRH7 1159 aa17.23■□□□□ 0.35
COPS3-201ENST00000268717 REPS2Q8NFH8 660 aa17.23■□□□□ 0.35
COPS3-201ENST00000268717 SNX29Q8TEQ0 813 aa17.23■□□□□ 0.35
COPS3-201ENST00000268717 CDK5RAP3Q96JB5 506 aa17.23■□□□□ 0.35
COPS3-201ENST00000268717 C7orf25Q9BPX7 421 aa17.23■□□□□ 0.35
COPS3-201ENST00000268717 TRIM5Q9C035 493 aa17.23■□□□□ 0.35
COPS3-201ENST00000268717 CPA4Q9UI42 421 aa17.23■□□□□ 0.35
COPS3-201ENST00000268717 TRIM17Q9Y577 477 aa17.23■□□□□ 0.35
COPS3-201ENST00000268717 FRMPD4Q14CM0 1322 aa17.23■□□□□ 0.35
COPS3-201ENST00000268717 RPTORQ8N122 1335 aa17.23■□□□□ 0.35
COPS3-201ENST00000268717 MGAMO43451 1857 aa17.23■□□□□ 0.35
COPS3-201ENST00000268717 PARP14Q460N5 1801 aa17.22■□□□□ 0.35
COPS3-201ENST00000268717 IGLV3-22A0A075B6J6 115 aa17.22■□□□□ 0.35
COPS3-201ENST00000268717 POTEMA6NI47 508 aa17.22■□□□□ 0.35
COPS3-201ENST00000268717 RPN1P04843 607 aaKnown RBP17.22■□□□□ 0.35
COPS3-201ENST00000268717 COG2Q14746 738 aa17.22■□□□□ 0.35
COPS3-201ENST00000268717 PRR16Q569H4 304 aa17.22■□□□□ 0.35
COPS3-201ENST00000268717 HAUS3Q68CZ6 603 aa17.22■□□□□ 0.35
COPS3-201ENST00000268717 ISM2Q6H9L7 571 aa17.22■□□□□ 0.35
COPS3-201ENST00000268717 FCHSD1Q86WN1 690 aa17.22■□□□□ 0.35
COPS3-201ENST00000268717 CENPFP49454 3210 aa17.22■□□□□ 0.35
COPS3-201ENST00000268717 GOLGA6L6A8MZA4 724 aa17.21■□□□□ 0.35
COPS3-201ENST00000268717 TPM3P06753 285 aa17.21■□□□□ 0.35
COPS3-201ENST00000268717 BCRP11274 1271 aa17.21■□□□□ 0.35
COPS3-201ENST00000268717 LACTBP83111 547 aaPredicted RBP17.21■□□□□ 0.35
COPS3-201ENST00000268717 SPIRE1Q08AE8 756 aa17.21■□□□□ 0.35
COPS3-201ENST00000268717 TKFCQ3LXA3 575 aa17.21■□□□□ 0.35
COPS3-201ENST00000268717 ZNF658Q5TYW1 1059 aaPredicted RBP17.21■□□□□ 0.35
COPS3-201ENST00000268717 FBXO46Q6PJ61 603 aaPredicted RBP17.21■□□□□ 0.35
COPS3-201ENST00000268717 NIPA1Q7RTP0 329 aa17.21■□□□□ 0.35
COPS3-201ENST00000268717 LRRC15Q8TF66 581 aa17.21■□□□□ 0.35
COPS3-201ENST00000268717 TBC1D5Q92609 795 aa17.21■□□□□ 0.35
COPS3-201ENST00000268717 ATG4CQ96DT6 458 aa17.21■□□□□ 0.35
COPS3-201ENST00000268717 PNMA5Q96PV4 448 aa17.21■□□□□ 0.35
COPS3-201ENST00000268717 EFCC1Q9HA90 598 aa17.21■□□□□ 0.35
COPS3-201ENST00000268717 RAVER2Q9HCJ3 691 aaKnown RBP17.21■□□□□ 0.35
COPS3-201ENST00000268717 HOXC10Q9NYD6 342 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms