RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 GOLGA5Q8TBA6 731 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 HAS1Q92839 578 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 SECISBP2LQ93073 1101 aaKnown RBP13.82□□□□□ -0.2
BEST3-201ENST00000266661 MTMR8Q96EF0 704 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 CCDC42Q96M95 316 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 RIC8AQ9NPQ8 531 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 POLLQ9UGP5 575 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 GGA1Q9UJY5 639 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 HPCAL4Q9UM19 191 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 JRKLQ9Y4A0 524 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 DAGLAQ9Y4D2 1042 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 CAPN6Q9Y6Q1 641 aa13.82□□□□□ -0.2
BEST3-201ENST00000266661 MYBL2P10244 700 aa13.81□□□□□ -0.2
BEST3-201ENST00000266661 ACTN2P35609 894 aa13.81□□□□□ -0.2
BEST3-201ENST00000266661 EIF4A3P38919 411 aaKnown RBP13.81□□□□□ -0.2
BEST3-201ENST00000266661 MAPK8IP2Q13387 824 aaPredicted RBP13.81□□□□□ -0.2
BEST3-201ENST00000266661 MFSD14BQ5SR56 506 aa13.81□□□□□ -0.2
BEST3-201ENST00000266661 HGSNATQ68CP4 663 aa13.81□□□□□ -0.2
BEST3-201ENST00000266661 STYK1Q6J9G0 422 aa13.81□□□□□ -0.2
BEST3-201ENST00000266661 CCDC84Q86UT8 332 aaPredicted RBP13.81□□□□□ -0.2
BEST3-201ENST00000266661 TRIM58Q8NG06 486 aa13.81□□□□□ -0.2
BEST3-201ENST00000266661 TBC1D16Q8TBP0 767 aa13.81□□□□□ -0.2
BEST3-201ENST00000266661 COG1Q8WTW3 980 aa13.81□□□□□ -0.2
BEST3-201ENST00000266661 TBC1D22AQ8WUA7 517 aa13.81□□□□□ -0.2
BEST3-201ENST00000266661 RBM17Q96I25 401 aaKnown RBP13.81□□□□□ -0.2
BEST3-201ENST00000266661 JMJD4Q9H9V9 463 aa13.81□□□□□ -0.2
BEST3-201ENST00000266661 FRMPD2Q68DX3 1309 aaPredicted RBP13.81□□□□□ -0.2
BEST3-201ENST00000266661 POTEMA6NI47 508 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 RBAK-RBAKDNI3L0D1 243 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 FGFR1OPO95684 399 aaKnown RBP13.8□□□□□ -0.2
BEST3-201ENST00000266661 AKR1B1P15121 316 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 LMAN1P49257 510 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 KIF11P52732 1056 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 ZNF543Q08ER8 600 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 PDXDC1Q6P996 788 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 SLF2Q8IX21 1173 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 SMCR8Q8TEV9 937 aaPredicted RBP13.8□□□□□ -0.2
BEST3-201ENST00000266661 DDX12PQ92771 950 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 CAPZA3Q96KX2 299 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 PCDHA2Q9Y5H9 948 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 MYO3BQ8WXR4 1341 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 SBF1O95248 1867 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 FER1L6Q2WGJ9 1857 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 PNMA6FA0A0J9YX94 578 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 SSU72P8A0A1W2PR75 194 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 MACROD2A1Z1Q3 448 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 AGPSO00116 658 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 IPO7O95373 1038 aaKnown RBP13.8□□□□□ -0.2
BEST3-201ENST00000266661 IDEP14735 1019 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 SEPT2Q15019 361 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 SPA17Q15506 151 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 TMEM266Q2M3C6 531 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 DYMQ7RTS9 669 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 ZC3H3Q8IXZ2 948 aaKnown RBP13.8□□□□□ -0.2
BEST3-201ENST00000266661 AENQ8WTP8 325 aaKnown RBP13.8□□□□□ -0.2
BEST3-201ENST00000266661 RUBCNQ92622 972 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 PCMTD1Q96MG8 357 aaPredicted RBP13.8□□□□□ -0.2
BEST3-201ENST00000266661 IFIH1Q9BYX4 1025 aaKnown RBP13.8□□□□□ -0.2
BEST3-201ENST00000266661 LRRC27Q9C0I9 530 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 MLXIPQ9HAP2 919 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 SALL4Q9UJQ4 1053 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 LRRC37AA6NMS7 1700 aa13.8□□□□□ -0.2
BEST3-201ENST00000266661 GREB1LQ9C091 1923 aaPredicted RBP13.8□□□□□ -0.2
BEST3-201ENST00000266661 LRRC53A6NM62 1247 aa13.79□□□□□ -0.2
BEST3-201ENST00000266661 BBOX1O75936 387 aa13.79□□□□□ -0.2
BEST3-201ENST00000266661 NOL4O94818 638 aa13.79□□□□□ -0.2
BEST3-201ENST00000266661 CAPN2P17655 700 aa13.79□□□□□ -0.2
BEST3-201ENST00000266661 ALDH1B1P30837 517 aa13.79□□□□□ -0.2
BEST3-201ENST00000266661 MARSP56192 900 aaKnown RBP13.79□□□□□ -0.2
BEST3-201ENST00000266661 MAP9Q49MG5 647 aa13.79□□□□□ -0.2
BEST3-201ENST00000266661 KRT79Q5XKE5 535 aa13.79□□□□□ -0.2
BEST3-201ENST00000266661 SNX29Q8TEQ0 813 aa13.79□□□□□ -0.2
BEST3-201ENST00000266661 C7orf43Q8WVR3 580 aa13.79□□□□□ -0.2
BEST3-201ENST00000266661 CNKSR1Q969H4 720 aa13.79□□□□□ -0.2
BEST3-201ENST00000266661 CRAMP1Q96RY5 1269 aa13.79□□□□□ -0.2
BEST3-201ENST00000266661 ACBD3Q9H3P7 528 aa13.79□□□□□ -0.2
BEST3-201ENST00000266661 DDX4Q9NQI0 724 aaKnown RBP13.79□□□□□ -0.2
BEST3-201ENST00000266661 FAM207AQ9NSI2 230 aaPredicted RBP13.79□□□□□ -0.2
BEST3-201ENST00000266661 PPEF1O14829 653 aaPredicted RBP13.78□□□□□ -0.2
BEST3-201ENST00000266661 TLR2O60603 784 aa13.78□□□□□ -0.2
BEST3-201ENST00000266661 USO1O60763 962 aaKnown RBP13.78□□□□□ -0.2
BEST3-201ENST00000266661 TACC1O75410 805 aa13.78□□□□□ -0.2
BEST3-201ENST00000266661 RAD51AP2Q09MP3 1159 aa13.78□□□□□ -0.2
BEST3-201ENST00000266661 COASYQ13057 564 aa13.78□□□□□ -0.2
BEST3-201ENST00000266661 ADGRF4Q8IZF3 695 aa13.78□□□□□ -0.2
BEST3-201ENST00000266661 LRRC47Q8N1G4 583 aaKnown RBP13.78□□□□□ -0.2
BEST3-201ENST00000266661 SYN2Q92777 582 aaPredicted RBP13.78□□□□□ -0.2
BEST3-201ENST00000266661 RAB34Q9BZG1 259 aa13.78□□□□□ -0.2
BEST3-201ENST00000266661 MOCS3O95396 460 aa13.78□□□□□ -0.2
BEST3-201ENST00000266661 SHMT1P34896 483 aa13.78□□□□□ -0.2
BEST3-201ENST00000266661 IRX5P78411 483 aaPredicted RBP13.78□□□□□ -0.2
BEST3-201ENST00000266661 C2orf54Q08AI8 447 aa13.78□□□□□ -0.2
BEST3-201ENST00000266661 LRRC41Q15345 812 aa13.78□□□□□ -0.2
BEST3-201ENST00000266661 UBE2SQ16763 222 aa13.78□□□□□ -0.2
BEST3-201ENST00000266661 RRAGAQ7L523 313 aa13.78□□□□□ -0.2
BEST3-201ENST00000266661 MBOAT7Q96N66 472 aa13.78□□□□□ -0.2
BEST3-201ENST00000266661 OSBPL9Q96SU4 736 aa13.78□□□□□ -0.2
BEST3-201ENST00000266661 MMRN2Q9H8L6 949 aa13.78□□□□□ -0.2
BEST3-201ENST00000266661 RNF216Q9NWF9 866 aaPredicted RBP13.78□□□□□ -0.2
BEST3-201ENST00000266661 SUGT1Q9Y2Z0 365 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms