RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 GOLGA6CA6NDK9 693 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 BUB1O43683 1085 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 IGSF3O75054 1194 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 GOLGA6DP0CG33 693 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 PSMC2P35998 433 aaKnown RBP16.86■□□□□ 0.29
TIMP3-201ENST00000266085 GRM4Q14833 912 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 PPP1R21Q6ZMI0 780 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 SMC6Q96SB8 1091 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 RAB17Q9H0T7 212 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 EMILIN3Q9NT22 766 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 GOLGA6AQ9NYA3 693 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 PCDHA6Q9UN73 950 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 PCDHA8Q9Y5H6 950 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 ZNF609O15014 1411 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 RIMS1Q86UR5 1692 aaKnown RBP16.86■□□□□ 0.29
TIMP3-201ENST00000266085 PPP2R5EQ16537 467 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 ERCC6LQ2NKX8 1250 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 MTERF2Q49AM1 385 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 PDXDC2PQ6P474 469 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 PYCARDQ9ULZ3 195 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 CCDC6Q16204 474 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 PTPROQ16827 1216 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 MIS18BP1Q6P0N0 1132 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 CACTINQ8WUQ7 758 aaKnown RBP16.86■□□□□ 0.29
TIMP3-201ENST00000266085 PKNOX2Q96KN3 472 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 RNF181Q9P0P0 153 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 RWDD2AQ9UIY3 292 aa16.86■□□□□ 0.29
TIMP3-201ENST00000266085 NDC80O14777 642 aa16.85■□□□□ 0.29
TIMP3-201ENST00000266085 CTTNQ14247 550 aaKnown RBP16.85■□□□□ 0.29
TIMP3-201ENST00000266085 PARVGQ9HBI0 331 aa16.85■□□□□ 0.29
TIMP3-201ENST00000266085 RMDN3Q96TC7 470 aa16.85■□□□□ 0.29
TIMP3-201ENST00000266085 EXOSC10Q01780 885 aaKnown RBP16.85■□□□□ 0.29
TIMP3-201ENST00000266085 TFDP1Q14186 410 aa16.85■□□□□ 0.29
TIMP3-201ENST00000266085 QRICH1Q2TAL8 776 aa16.85■□□□□ 0.29
TIMP3-201ENST00000266085 RAVER2Q9HCJ3 691 aaKnown RBP16.85■□□□□ 0.29
TIMP3-201ENST00000266085 POTEMA6NI47 508 aa16.85■□□□□ 0.29
TIMP3-201ENST00000266085 ALDH3A1P30838 453 aa16.85■□□□□ 0.29
TIMP3-201ENST00000266085 STRIP1Q5VSL9 837 aa16.85■□□□□ 0.29
TIMP3-201ENST00000266085 NT5C1BQ96P26 610 aa16.85■□□□□ 0.29
TIMP3-201ENST00000266085 AKT3Q9Y243 479 aa16.85■□□□□ 0.29
TIMP3-201ENST00000266085 VIMP08670 466 aaKnown RBP16.84■□□□□ 0.29
TIMP3-201ENST00000266085 PSMD2Q13200 908 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 INTS5Q6P9B9 1019 aaKnown RBP16.84■□□□□ 0.29
TIMP3-201ENST00000266085 KIF2CQ99661 725 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 TRIM7Q9C029 511 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 PCIF1Q9H4Z3 704 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 BCL2L12Q9HB09 334 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 A6NNZ2 444 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 TUBB8Q3ZCM7 444 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 MRRFQ96E11 262 aaKnown RBP16.84■□□□□ 0.29
TIMP3-201ENST00000266085 ZNF512BQ96KM6 892 aaPredicted RBP16.84■□□□□ 0.29
TIMP3-201ENST00000266085 ACCSQ96QU6 501 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 STIM2Q9P246 746 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 ZNRF3Q9ULT6 936 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 USP32Q8NFA0 1604 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 KRIT1O00522 736 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 MYL7Q01449 175 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 PTK2Q05397 1052 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 PPFIA1Q13136 1202 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 SETDB1Q15047 1291 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 KMT5BQ4FZB7 885 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 STAG2Q8N3U4 1231 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 HESX1Q9UBX0 185 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 IQGAP1P46940 1657 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 AFPP02771 609 aaKnown RBP16.84■□□□□ 0.29
TIMP3-201ENST00000266085 POLR2BP30876 1174 aaKnown RBP16.84■□□□□ 0.29
TIMP3-201ENST00000266085 HOXA7P31268 230 aaPredicted RBP16.84■□□□□ 0.29
TIMP3-201ENST00000266085 BPIFB4P59827 614 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 GOLGA8FQ08AF8 430 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 GOLGA8DPQ0D2H9 430 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 BRD3Q15059 726 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 AP5M1Q9H0R1 490 aa16.84■□□□□ 0.29
TIMP3-201ENST00000266085 HERC5Q9UII4 1024 aaKnown RBP16.84■□□□□ 0.29
TIMP3-201ENST00000266085 PXDNLA1KZ92 1463 aa16.83■□□□□ 0.29
TIMP3-201ENST00000266085 IQSEC2Q5JU85 1478 aa16.83■□□□□ 0.29
TIMP3-201ENST00000266085 NDUFAB1O14561 156 aa16.83■□□□□ 0.29
TIMP3-201ENST00000266085 IFNB1P01574 187 aa16.83■□□□□ 0.29
TIMP3-201ENST00000266085 MNAT1P51948 309 aa16.83■□□□□ 0.29
TIMP3-201ENST00000266085 MRPS9P82933 396 aaKnown RBP16.83■□□□□ 0.29
TIMP3-201ENST00000266085 MTMR3Q13615 1198 aa16.83■□□□□ 0.29
TIMP3-201ENST00000266085 RESP18Q5W5W9 173 aa16.83■□□□□ 0.29
TIMP3-201ENST00000266085 NACA2Q9H009 215 aa16.83■□□□□ 0.29
TIMP3-201ENST00000266085 TMEM206Q9H813 350 aa16.83■□□□□ 0.29
TIMP3-201ENST00000266085 EFCAB8A8MWE9 144 aa16.83■□□□□ 0.28
TIMP3-201ENST00000266085 NSFP46459 744 aaKnown RBP16.83■□□□□ 0.28
TIMP3-201ENST00000266085 IRX5P78411 483 aaPredicted RBP16.83■□□□□ 0.28
TIMP3-201ENST00000266085 LACTBP83111 547 aaPredicted RBP16.83■□□□□ 0.28
TIMP3-201ENST00000266085 ARHGAP4P98171 946 aa16.83■□□□□ 0.28
TIMP3-201ENST00000266085 FBXO33Q7Z6M2 555 aa16.83■□□□□ 0.28
TIMP3-201ENST00000266085 CCDC125Q86Z20 511 aa16.83■□□□□ 0.28
TIMP3-201ENST00000266085 GDAP1L1Q96MZ0 367 aa16.83■□□□□ 0.28
TIMP3-201ENST00000266085 APOL6Q9BWW8 343 aa16.83■□□□□ 0.28
TIMP3-201ENST00000266085 ALDH8A1Q9H2A2 487 aaPredicted RBP16.83■□□□□ 0.28
TIMP3-201ENST00000266085 HOXC10Q9NYD6 342 aa16.83■□□□□ 0.28
TIMP3-201ENST00000266085 RBL2Q08999 1139 aa16.83■□□□□ 0.28
TIMP3-201ENST00000266085 SESTD1Q86VW0 696 aa16.83■□□□□ 0.28
TIMP3-201ENST00000266085 ZNF579Q8NAF0 562 aaKnown RBP16.83■□□□□ 0.28
TIMP3-201ENST00000266085 KAZALD1Q96I82 304 aa16.83■□□□□ 0.28
TIMP3-201ENST00000266085 PLEKHA4Q9H4M7 779 aa16.83■□□□□ 0.28
TIMP3-201ENST00000266085 TMEM260Q9NX78 707 aa16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms