RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 AP3B2Q13367 1082 aa8.27□□□□□ -1.09
DEPDC1B-201ENST00000265036 MTMR1Q13613 665 aa8.27□□□□□ -1.09
DEPDC1B-201ENST00000265036 HSDL1Q3SXM5 330 aa8.27□□□□□ -1.09
DEPDC1B-201ENST00000265036 GNPTABQ3T906 1256 aa8.27□□□□□ -1.09
DEPDC1B-201ENST00000265036 KRT40Q6A162 431 aa8.27□□□□□ -1.09
DEPDC1B-201ENST00000265036 PIK3AP1Q6ZUJ8 805 aa8.27□□□□□ -1.09
DEPDC1B-201ENST00000265036 CYFIP1Q7L576 1253 aa8.27□□□□□ -1.09
DEPDC1B-201ENST00000265036 UBE2Q1Q7Z7E8 422 aa8.27□□□□□ -1.09
DEPDC1B-201ENST00000265036 TRIM50Q86XT4 487 aa8.27□□□□□ -1.09
DEPDC1B-201ENST00000265036 SPRYD3Q8NCJ5 442 aa8.27□□□□□ -1.09
DEPDC1B-201ENST00000265036 ARRDC4Q8NCT1 418 aa8.27□□□□□ -1.09
DEPDC1B-201ENST00000265036 TBCKQ8TEA7 893 aa8.27□□□□□ -1.09
DEPDC1B-201ENST00000265036 DPF3Q92784 378 aa8.27□□□□□ -1.09
DEPDC1B-201ENST00000265036 INPP4AQ96PE3 977 aaPredicted RBP8.27□□□□□ -1.09
DEPDC1B-201ENST00000265036 PHF20Q9BVI0 1012 aa8.27□□□□□ -1.09
DEPDC1B-201ENST00000265036 C11orf49Q9H6J7 331 aa8.27□□□□□ -1.09
DEPDC1B-201ENST00000265036 DDX41Q9UJV9 622 aaKnown RBP8.27□□□□□ -1.09
DEPDC1B-201ENST00000265036 TRIP12Q14669 1992 aaPredicted RBP8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 BTBD18B2RXH4 712 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 TDP2O95551 362 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 XBP1P17861 261 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 ATP2B1P20020 1258 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 GJA9P57773 515 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 LRRC26Q2I0M4 334 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 PRR16Q569H4 304 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 IQSEC1Q6DN90 963 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 DIS3L2Q8IYB7 885 aaKnown RBP8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 C8orf76Q96K31 380 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 ATP11BQ9Y2G3 1177 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 LOC102724159A0A0B4J2E5 919 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 RBM47A0AV96 593 aaKnown RBP8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 PQBP1O60828 265 aaKnown RBP8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 FOSP01100 380 aaPredicted RBP8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 GH1P01241 217 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 ARP10275 920 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 COL6A1P12109 1028 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 SYN1P17600 705 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 GJB2P29033 226 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 TRIM29Q14134 588 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 PWP2Q15269 919 aaKnown RBP8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 DHX37Q8IY37 1157 aaKnown RBP8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 C7orf61Q8IZ16 206 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 BICD2Q8TD16 824 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 WASF1Q92558 559 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 SPATA33Q96N06 139 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 EHMT1Q9H9B1 1298 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 MLXIPQ9HAP2 919 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 STARD7Q9NQZ5 370 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 SH3GLB2Q9NR46 395 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 KCNH7Q9NS40 1196 aa8.26□□□□□ -1.09
DEPDC1B-201ENST00000265036 SCN10AQ9Y5Y9 1956 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 CCDC194A0A1B0GVG4 234 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 WNT7AO00755 349 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 FIBPO43427 364 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 MMP1P03956 469 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 MMP3P08254 477 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 KRT2P35908 639 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 LETM2Q2VYF4 491 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 TRIM60Q495X7 471 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 CEP55Q53EZ4 464 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 MYSM1Q5VVJ2 828 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 TRMT1LQ7Z2T5 733 aaKnown RBP8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 SAMD3Q8N6K7 520 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 ANKLE1Q8NAG6 615 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 KLHDC9Q8NEP7 349 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 GLT8D2Q9H1C3 349 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 UPF3AQ9H1J1 476 aaKnown RBP8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 ZMYND8Q9ULU4 1186 aaPredicted RBP8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 M0R2N6 131 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 NOP56O00567 594 aaKnown RBP8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 EDIL3O43854 480 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 KCNA2P16389 499 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 ITGB3BPQ13352 177 aaPredicted RBP8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 FAM47CQ5HY64 1035 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 CCSAPQ6IQ19 270 aaPredicted RBP8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 NLRX1Q86UT6 975 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 PLA2G4DQ86XP0 818 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 GLT1D1Q96MS3 346 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 MXRA8Q9BRK3 442 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 PRDM5Q9NQX1 630 aaPredicted RBP8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 SMC3Q9UQE7 1217 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 UBIAD1Q9Y5Z9 338 aa8.25□□□□□ -1.09
DEPDC1B-201ENST00000265036 IGLV3-22A0A075B6J6 115 aa8.24□□□□□ -1.09
DEPDC1B-201ENST00000265036 KIF28PB7ZC32 967 aa8.24□□□□□ -1.09
DEPDC1B-201ENST00000265036 K7ELQ4 463 aaPredicted RBP8.24□□□□□ -1.09
DEPDC1B-201ENST00000265036 SLC37A4O43826 429 aa8.24□□□□□ -1.09
DEPDC1B-201ENST00000265036 RGS19P49795 217 aa8.24□□□□□ -1.09
DEPDC1B-201ENST00000265036 CPT1AP50416 773 aa8.24□□□□□ -1.09
DEPDC1B-201ENST00000265036 HMGN5P82970 282 aaKnown RBP8.24□□□□□ -1.09
DEPDC1B-201ENST00000265036 NONOQ15233 471 aaKnown RBP eCLIP8.24□□□□□ -1.09
DEPDC1B-201ENST00000265036 CELF3Q5SZQ8 465 aaKnown RBP8.24□□□□□ -1.09
DEPDC1B-201ENST00000265036 UTP14CQ5TAP6 766 aaKnown RBP8.24□□□□□ -1.09
DEPDC1B-201ENST00000265036 MCTP1Q6DN14 999 aa8.24□□□□□ -1.09
DEPDC1B-201ENST00000265036 DAGLBQ8NCG7 672 aa8.24□□□□□ -1.09
DEPDC1B-201ENST00000265036 CRYGNQ8WXF5 182 aa8.24□□□□□ -1.09
DEPDC1B-201ENST00000265036 LLPHQ9BRT6 129 aaKnown RBP8.24□□□□□ -1.09
DEPDC1B-201ENST00000265036 MAF1Q9H063 256 aa8.24□□□□□ -1.09
DEPDC1B-201ENST00000265036 JADE2Q9NQC1 790 aa8.24□□□□□ -1.09
DEPDC1B-201ENST00000265036 PHF24Q9UPV7 400 aa8.24□□□□□ -1.09
DEPDC1B-201ENST00000265036 KAT6AQ92794 2004 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms