RNA–Protein interactions for RNA: ENST00000263066.10

LDB3-201, Transcript of LIM domain binding 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene LDB3, Length 3,873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-201ENST00000263066 NR1H4Q96RI1 486 aaPredicted RBP9.16□□□□□ -0.94
LDB3-201ENST00000263066 NACA2Q9H009 215 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 GOLPH3LQ9H4A5 285 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 TCEAL9Q9UHQ7 104 aa9.16□□□□□ -0.94
LDB3-201ENST00000263066 USP17L12C9JPN9 530 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 USP17L21D6R901 530 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 TMCC1O94876 653 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 MDH1P40925 334 aaKnown RBP9.15□□□□□ -0.94
LDB3-201ENST00000263066 PNOCQ13519 176 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 UBE4AQ14139 1066 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 MCMDC2Q4G0Z9 681 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 CACNA2D4Q7Z3S7 1137 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 VSIG1Q86XK7 387 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 GPIHBP1Q8IV16 184 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 DDX12PQ92771 950 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 RRP36Q96EU6 259 aaKnown RBP9.15□□□□□ -0.94
LDB3-201ENST00000263066 SEC16BQ96JE7 1060 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 CLMNQ96JQ2 1002 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 CEMIPQ8WUJ3 1361 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 KDM3BQ7LBC6 1761 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 H7C1D1 291 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 TSPY3P0CV98 308 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 TSPY8P0CW00 308 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 FNTAP49354 379 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 EPHB4P54760 987 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 GUCY2DQ02846 1103 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 CCDC15Q0P6D6 951 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 TTF1Q15361 905 aaPredicted RBP9.15□□□□□ -0.94
LDB3-201ENST00000263066 OTUD7BQ6GQQ9 843 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 IFT20Q8IY31 132 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 KCNG4Q8TDN1 519 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 AGAP11Q8TF27 550 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 ELAC2Q9BQ52 826 aaKnown RBP9.15□□□□□ -0.94
LDB3-201ENST00000263066 LZTS2Q9BRK4 669 aa9.15□□□□□ -0.94
LDB3-201ENST00000263066 TDRD3Q9H7E2 651 aaKnown RBP9.15□□□□□ -0.94
LDB3-201ENST00000263066 DPPA5A6NC42 116 aa9.15□□□□□ -0.95
LDB3-201ENST00000263066 RNF113AO15541 343 aaKnown RBP9.15□□□□□ -0.95
LDB3-201ENST00000263066 USO1O60763 962 aaKnown RBP9.15□□□□□ -0.95
LDB3-201ENST00000263066 RASSF9O75901 435 aa9.15□□□□□ -0.95
LDB3-201ENST00000263066 NPR1P16066 1061 aa9.15□□□□□ -0.95
LDB3-201ENST00000263066 TMOD1P28289 359 aa9.15□□□□□ -0.95
LDB3-201ENST00000263066 CTNNA1P35221 906 aaKnown RBP9.15□□□□□ -0.95
LDB3-201ENST00000263066 KRT9P35527 623 aa9.15□□□□□ -0.95
LDB3-201ENST00000263066 RFC5P40937 340 aa9.15□□□□□ -0.95
LDB3-201ENST00000263066 NLRP5P59047 1200 aa9.15□□□□□ -0.95
LDB3-201ENST00000263066 KIF5AQ12840 1032 aa9.15□□□□□ -0.95
LDB3-201ENST00000263066 SETDB1Q15047 1291 aa9.15□□□□□ -0.95
LDB3-201ENST00000263066 P3H1Q32P28 736 aa9.15□□□□□ -0.95
LDB3-201ENST00000263066 TMEM67Q5HYA8 995 aa9.15□□□□□ -0.95
LDB3-201ENST00000263066 SPTY2D1Q68D10 685 aaPredicted RBP9.15□□□□□ -0.95
LDB3-201ENST00000263066 LMBRD2Q68DH5 695 aaPredicted RBP9.15□□□□□ -0.95
LDB3-201ENST00000263066 MAB21L3Q8N8X9 362 aa9.15□□□□□ -0.95
LDB3-201ENST00000263066 TBC1D5Q92609 795 aa9.15□□□□□ -0.95
LDB3-201ENST00000263066 ARHGEF2Q92974 986 aaKnown RBP9.15□□□□□ -0.95
LDB3-201ENST00000263066 RMDN2Q96LZ7 410 aa9.15□□□□□ -0.95
LDB3-201ENST00000263066 MMS19Q96T76 1030 aa9.15□□□□□ -0.95
LDB3-201ENST00000263066 SPATA7Q9P0W8 599 aa9.15□□□□□ -0.95
LDB3-201ENST00000263066 ADGRG1Q9Y653 693 aa9.15□□□□□ -0.95
LDB3-201ENST00000263066 TACC1O75410 805 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 HLA-DOAP06340 250 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 VCAM1P19320 739 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 ALS2CLQ60I27 953 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 ILDR2Q71H61 639 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 TRIM50Q86XT4 487 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 SPICE1Q8N0Z3 855 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 RPGRIP1Q96KN7 1286 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 PREBQ9HCU5 417 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 KCNQ5Q9NR82 932 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 STIM2Q9P246 746 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 DENND2AQ9ULE3 1009 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 PCDHA7Q9UN72 937 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 FAF1Q9UNN5 650 aaPredicted RBP9.14□□□□□ -0.95
LDB3-201ENST00000263066 PCDHGA4Q9Y5G9 962 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 PDE4DIPQ5VU43 2346 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 XDHP47989 1333 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 GOLGA8BA8MQT2 603 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 SMNDC1O75940 238 aaKnown RBP eCLIP9.14□□□□□ -0.95
LDB3-201ENST00000263066 NTSR2O95665 410 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 ELF3P78545 371 aaPredicted RBP9.14□□□□□ -0.95
LDB3-201ENST00000263066 FOXO4P98177 505 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 ANKRD20A8PQ5CZ79 823 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 SAPCD2Q86UD0 394 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 LCA5Q86VQ0 697 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 TSPAN18Q96SJ8 248 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 HMG20BQ9P0W2 317 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 RASAL2Q9UJF2 1139 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 BCL9O00512 1426 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 MROH5Q6ZUA9 1318 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 ZSCAN9O15535 394 aaPredicted RBP9.14□□□□□ -0.95
LDB3-201ENST00000263066 CASP14P31944 242 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 CXCR5P32302 372 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 ANKRD20A2Q5SQ80 823 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 ANKRD20A1Q5TYW2 823 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 ANKRD20A3Q5VUR7 823 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 CREB3L3Q68CJ9 461 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 ATL3Q6DD88 541 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 CCNI2Q6ZMN8 369 aaPredicted RBP9.14□□□□□ -0.95
LDB3-201ENST00000263066 RUFY4Q6ZNE9 571 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 TMTC1Q8IUR5 882 aa9.14□□□□□ -0.95
LDB3-201ENST00000263066 ZNF34Q8IZ26 560 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms