RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 LMNB2Q03252 620 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 TMEM259Q4ZIN3 620 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 LRRC8AQ8IWT6 810 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 SULF1Q8IWU6 871 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 ATP8A1Q9Y2Q0 1164 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 EPN1Q9Y6I3 576 aaPredicted RBP15.48■□□□□ 0.07
CUX2-201ENST00000261726 SHROOM2Q13796 1616 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 HSP90AA5PQ58FG0 334 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 DRC3Q9H069 523 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 SLC13A4Q9UKG4 626 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 ZFYVE16Q7Z3T8 1539 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 COPB1P53618 953 aaKnown RBP15.48■□□□□ 0.07
CUX2-201ENST00000261726 C2orf54Q08AI8 447 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 KIAA1841Q6NSI8 718 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 DEPDC1BQ8WUY9 529 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 ZNF577Q9BSK1 485 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 PNMA2Q9UL42 364 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 HECW2Q9P2P5 1572 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 TRIM37O94972 964 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 RUNDC3BQ96NL0 473 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 HAUS4Q9H6D7 363 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 SLC12A6Q9UHW9 1150 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 SLCO1A2P46721 670 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 OSTNP61366 133 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 YWHAHQ04917 246 aaPredicted RBP15.48■□□□□ 0.07
CUX2-201ENST00000261726 ART3Q13508 389 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 TTC1Q99614 292 aa15.48■□□□□ 0.07
CUX2-201ENST00000261726 XPOTO43592 962 aaKnown RBP15.47■□□□□ 0.07
CUX2-201ENST00000261726 EPHB1P54762 984 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 PLTPP55058 493 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 ESRRGP62508 458 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 ABCB5Q2M3G0 1257 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 SZRD1Q7Z422 152 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 TCP11Q8WWU5 503 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 YEATS2Q9ULM3 1422 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 BTBD18B2RXH4 712 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 CLIC2O15247 247 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 SEC31AO94979 1220 aaKnown RBP15.47■□□□□ 0.07
CUX2-201ENST00000261726 CASP14P31944 242 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 PTH1RQ03431 593 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 MCTP2Q6DN12 878 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 PCDHA1Q9Y5I3 950 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 A0A0D9SFI3 127 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 EEF1DP29692 281 aaKnown RBP15.47■□□□□ 0.07
CUX2-201ENST00000261726 LRRC41Q15345 812 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 SPATA1Q5VX52 437 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 ZNF274Q96GC6 653 aaPredicted RBP15.47■□□□□ 0.07
CUX2-201ENST00000261726 HACD3Q9P035 362 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 ATP2B4P23634 1241 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 TMED1Q13445 227 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 MTRQ99707 1265 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 CALN1Q9BXU9 219 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 EPB41L5Q9HCM4 733 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 CLRN2A0PK11 232 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 EIF3CLB5ME19 914 aaKnown RBP15.47■□□□□ 0.07
CUX2-201ENST00000261726 ATP5JP18859 108 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 TRIM67Q6ZTA4 783 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.47■□□□□ 0.07
CUX2-201ENST00000261726 EIF3CQ99613 913 aaKnown RBP15.47■□□□□ 0.07
CUX2-201ENST00000261726 SPZ1Q9BXG8 430 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 KMT5AQ9NQR1 393 aa15.47■□□□□ 0.07
CUX2-201ENST00000261726 ZNF215Q9UL58 517 aaPredicted RBP15.47■□□□□ 0.07
CUX2-201ENST00000261726 TFAMQ00059 246 aaKnown RBP15.46■□□□□ 0.07
CUX2-201ENST00000261726 KCTD1Q719H9 257 aa15.46■□□□□ 0.07
CUX2-201ENST00000261726 NXF1Q9UBU9 619 aaKnown RBP15.46■□□□□ 0.07
CUX2-201ENST00000261726 UBN2Q6ZU65 1347 aa15.46■□□□□ 0.07
CUX2-201ENST00000261726 CXCR5P32302 372 aa15.46■□□□□ 0.07
CUX2-201ENST00000261726 ARHGDIAP52565 204 aa15.46■□□□□ 0.07
CUX2-201ENST00000261726 FBXW4P57775 412 aa15.46■□□□□ 0.07
CUX2-201ENST00000261726 BPIFB4P59827 614 aa15.46■□□□□ 0.07
CUX2-201ENST00000261726 KCTD2Q14681 263 aa15.46■□□□□ 0.07
CUX2-201ENST00000261726 NR2F2P24468 414 aa15.46■□□□□ 0.07
CUX2-201ENST00000261726 ARL4AP40617 200 aa15.46■□□□□ 0.07
CUX2-201ENST00000261726 SLC35F6Q8N357 371 aa15.46■□□□□ 0.07
CUX2-201ENST00000261726 NEURL1BA8MQ27 555 aa15.46■□□□□ 0.07
CUX2-201ENST00000261726 KCNA6P17658 529 aa15.46■□□□□ 0.07
CUX2-201ENST00000261726 PCGF5Q86SE9 256 aa15.46■□□□□ 0.07
CUX2-201ENST00000261726 NUDCD1Q96RS6 583 aa15.46■□□□□ 0.07
CUX2-201ENST00000261726 TUBGCP2Q9BSJ2 902 aa15.46■□□□□ 0.07
CUX2-201ENST00000261726 PLXNC1O60486 1568 aa15.46■□□□□ 0.07
CUX2-201ENST00000261726 AP5M1Q9H0R1 490 aa15.46■□□□□ 0.06
CUX2-201ENST00000261726 SYNDIG1LA6NDD5 238 aa15.46■□□□□ 0.06
CUX2-201ENST00000261726 SYF2O95926 243 aaKnown RBP15.46■□□□□ 0.06
CUX2-201ENST00000261726 TPCN1Q9ULQ1 816 aa15.46■□□□□ 0.06
CUX2-201ENST00000261726 PSMC2P35998 433 aaKnown RBP15.45■□□□□ 0.06
CUX2-201ENST00000261726 AP1ARQ63HQ0 302 aa15.45■□□□□ 0.06
CUX2-201ENST00000261726 KRT80Q6KB66 452 aa15.45■□□□□ 0.06
CUX2-201ENST00000261726 SMYD4Q8IYR2 804 aaPredicted RBP15.45■□□□□ 0.06
CUX2-201ENST00000261726 MOSPD1Q9UJG1 213 aa15.45■□□□□ 0.06
CUX2-201ENST00000261726 USP21Q9UK80 565 aa15.45■□□□□ 0.06
CUX2-201ENST00000261726 PCDHA7Q9UN72 937 aa15.45■□□□□ 0.06
CUX2-201ENST00000261726 DAAM1Q9Y4D1 1078 aa15.45■□□□□ 0.06
CUX2-201ENST00000261726 RETREG2Q8NC44 543 aa15.45■□□□□ 0.06
CUX2-201ENST00000261726 EFHD1Q9BUP0 239 aa15.45■□□□□ 0.06
CUX2-201ENST00000261726 PARD3Q8TEW0 1356 aa15.45■□□□□ 0.06
CUX2-201ENST00000261726 H3BRJ5 948 aa15.45■□□□□ 0.06
CUX2-201ENST00000261726 MT-ND3P03897 115 aa15.45■□□□□ 0.06
CUX2-201ENST00000261726 TRIM59Q8IWR1 403 aa15.45■□□□□ 0.06
CUX2-201ENST00000261726 TRIM42Q8IWZ5 723 aa15.45■□□□□ 0.06
CUX2-201ENST00000261726 UGGT1Q9NYU2 1555 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms