RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 TOB1P50616 345 aaPredicted RBP23.48■■□□□ 1.35
RTCA-201ENST00000260563 SETQ01105 290 aaPredicted RBP23.48■■□□□ 1.35
RTCA-201ENST00000260563 MTMR1Q13613 665 aa23.48■■□□□ 1.35
RTCA-201ENST00000260563 MOXD1Q6UVY6 613 aa23.48■■□□□ 1.35
RTCA-201ENST00000260563 NAP1L4Q99733 375 aaKnown RBP23.48■■□□□ 1.35
RTCA-201ENST00000260563 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.48■■□□□ 1.35
RTCA-201ENST00000260563 JADE2Q9NQC1 790 aa23.48■■□□□ 1.35
RTCA-201ENST00000260563 FAM184BQ9ULE4 1060 aa23.48■■□□□ 1.35
RTCA-201ENST00000260563 RBM47A0AV96 593 aaKnown RBP23.47■■□□□ 1.35
RTCA-201ENST00000260563 FAM86B1E9PN63 330 aa23.47■■□□□ 1.35
RTCA-201ENST00000260563 FIBPO43427 364 aa23.47■■□□□ 1.35
RTCA-201ENST00000260563 FAM86B2P0C5J1 330 aa23.47■■□□□ 1.35
RTCA-201ENST00000260563 CCL5P13501 91 aa23.47■■□□□ 1.35
RTCA-201ENST00000260563 TRAPPC10P48553 1259 aa23.47■■□□□ 1.35
RTCA-201ENST00000260563 MTFR1Q15390 333 aa23.47■■□□□ 1.35
RTCA-201ENST00000260563 KCNV1Q6PIU1 500 aa23.47■■□□□ 1.35
RTCA-201ENST00000260563 CDHR1Q96JP9 859 aa23.47■■□□□ 1.35
RTCA-201ENST00000260563 WDR11Q9BZH6 1224 aa23.47■■□□□ 1.35
RTCA-201ENST00000260563 FTOQ9C0B1 505 aaKnown RBP eCLIP23.47■■□□□ 1.35
RTCA-201ENST00000260563 SCAND2PQ9GZW5 306 aaPredicted RBP23.47■■□□□ 1.35
RTCA-201ENST00000260563 UNC93B1Q9H1C4 597 aa23.47■■□□□ 1.35
RTCA-201ENST00000260563 C11orf97A0A1B0GVM6 126 aaPredicted RBP23.46■■□□□ 1.35
RTCA-201ENST00000260563 GOLGA6L22H0YM25 854 aa23.46■■□□□ 1.35
RTCA-201ENST00000260563 CCNT1O60563 726 aaKnown RBP23.46■■□□□ 1.35
RTCA-201ENST00000260563 TDP2O95551 362 aa23.46■■□□□ 1.35
RTCA-201ENST00000260563 GCFC2P16383 781 aaKnown RBP23.46■■□□□ 1.35
RTCA-201ENST00000260563 ICAM3P32942 547 aa23.46■■□□□ 1.35
RTCA-201ENST00000260563 MCM4P33991 863 aa23.46■■□□□ 1.35
RTCA-201ENST00000260563 CEBPZQ03701 1054 aaKnown RBP23.46■■□□□ 1.35
RTCA-201ENST00000260563 IQSEC1Q6DN90 963 aa23.46■■□□□ 1.35
RTCA-201ENST00000260563 NIPA1Q7RTP0 329 aa23.46■■□□□ 1.35
RTCA-201ENST00000260563 CYP2W1Q8TAV3 490 aa23.46■■□□□ 1.35
RTCA-201ENST00000260563 GDPD2Q9HCC8 539 aa23.46■■□□□ 1.35
RTCA-201ENST00000260563 POLR3EQ9NVU0 708 aa23.46■■□□□ 1.35
RTCA-201ENST00000260563 CLIC4Q9Y696 253 aa23.46■■□□□ 1.35
RTCA-201ENST00000260563 IGLV3-22A0A075B6J6 115 aa23.45■■□□□ 1.34
RTCA-201ENST00000260563 EDIL3O43854 480 aa23.45■■□□□ 1.34
RTCA-201ENST00000260563 MSCO60682 206 aa23.45■■□□□ 1.34
RTCA-201ENST00000260563 TNFAIP2Q03169 654 aa23.45■■□□□ 1.34
RTCA-201ENST00000260563 NFKBIBQ15653 356 aa23.45■■□□□ 1.34
RTCA-201ENST00000260563 PRR16Q569H4 304 aa23.45■■□□□ 1.34
RTCA-201ENST00000260563 ANO1Q5XXA6 986 aa23.45■■□□□ 1.34
RTCA-201ENST00000260563 PLA2G4DQ86XP0 818 aa23.45■■□□□ 1.34
RTCA-201ENST00000260563 RNF208Q9H0X6 261 aa23.45■■□□□ 1.34
RTCA-201ENST00000260563 DDX20Q9UHI6 824 aaKnown RBP23.45■■□□□ 1.34
RTCA-201ENST00000260563 MEIS1O00470 390 aa23.44■■□□□ 1.34
RTCA-201ENST00000260563 MAFGO15525 162 aa23.44■■□□□ 1.34
RTCA-201ENST00000260563 ARIH2O95376 493 aa23.44■■□□□ 1.34
RTCA-201ENST00000260563 TXNP10599 105 aaKnown RBP23.44■■□□□ 1.34
RTCA-201ENST00000260563 TGFB3P10600 412 aa23.44■■□□□ 1.34
RTCA-201ENST00000260563 ATP2B1P20020 1258 aa23.44■■□□□ 1.34
RTCA-201ENST00000260563 NASPP49321 788 aaPredicted RBP23.44■■□□□ 1.34
RTCA-201ENST00000260563 NBR1Q14596 966 aa23.44■■□□□ 1.34
RTCA-201ENST00000260563 CSPP1Q1MSJ5 1256 aa23.44■■□□□ 1.34
RTCA-201ENST00000260563 PPP4R3AQ6IN85 833 aa23.44■■□□□ 1.34
RTCA-201ENST00000260563 PAK6Q9NQU5 681 aaPredicted RBP23.44■■□□□ 1.34
RTCA-201ENST00000260563 DDX25Q9UHL0 483 aaKnown RBP23.44■■□□□ 1.34
RTCA-201ENST00000260563 CYP3A7-CYP3A51PA0A087WV96 503 aa23.43■■□□□ 1.34
RTCA-201ENST00000260563 SPATA31C2B4DYI2 1134 aa23.43■■□□□ 1.34
RTCA-201ENST00000260563 NKRFO15226 690 aaKnown RBP eCLIP23.43■■□□□ 1.34
RTCA-201ENST00000260563 ADCY6O43306 1168 aa23.43■■□□□ 1.34
RTCA-201ENST00000260563 RARBP10826 455 aa23.43■■□□□ 1.34
RTCA-201ENST00000260563 SMPD1P17405 629 aa23.43■■□□□ 1.34
RTCA-201ENST00000260563 CYP3A7P24462 503 aa23.43■■□□□ 1.34
RTCA-201ENST00000260563 SEMA3FQ13275 785 aa23.43■■□□□ 1.34
RTCA-201ENST00000260563 SF3A1Q15459 793 aaKnown RBP23.43■■□□□ 1.34
RTCA-201ENST00000260563 Q4G0T1 1027 aa23.43■■□□□ 1.34
RTCA-201ENST00000260563 DUSP28Q4G0W2 176 aa23.43■■□□□ 1.34
RTCA-201ENST00000260563 TTC38Q5R3I4 469 aa23.43■■□□□ 1.34
RTCA-201ENST00000260563 TMEM87AQ8NBN3 555 aa23.43■■□□□ 1.34
RTCA-201ENST00000260563 LENG1Q96BZ8 264 aaPredicted RBP23.43■■□□□ 1.34
RTCA-201ENST00000260563 SPATA32Q96LK8 384 aa23.43■■□□□ 1.34
RTCA-201ENST00000260563 KCNH7Q9NS40 1196 aa23.43■■□□□ 1.34
RTCA-201ENST00000260563 PCDHB6Q9Y5E3 794 aa23.43■■□□□ 1.34
RTCA-201ENST00000260563 TCHHQ07283 1943 aa23.43■■□□□ 1.34
RTCA-201ENST00000260563 DDX11L8A8MPP1 907 aa23.43■■□□□ 1.34
RTCA-201ENST00000260563 UBA1P22314 1058 aaKnown RBP23.43■■□□□ 1.34
RTCA-201ENST00000260563 LY6KQ17RY6 165 aa23.43■■□□□ 1.34
RTCA-201ENST00000260563 CCDC62Q6P9F0 684 aa23.43■■□□□ 1.34
RTCA-201ENST00000260563 LEO1Q8WVC0 666 aaPredicted RBP23.43■■□□□ 1.34
RTCA-201ENST00000260563 LENG9Q96B70 501 aa23.43■■□□□ 1.34
RTCA-201ENST00000260563 MBOAT7Q96N66 472 aa23.43■■□□□ 1.34
RTCA-201ENST00000260563 DDX41Q9UJV9 622 aaKnown RBP23.43■■□□□ 1.34
RTCA-201ENST00000260563 YEATS4O95619 227 aa23.42■■□□□ 1.34
RTCA-201ENST00000260563 ARP10275 920 aa23.42■■□□□ 1.34
RTCA-201ENST00000260563 STK38Q15208 465 aa23.42■■□□□ 1.34
RTCA-201ENST00000260563 EIF4ENIF1Q9NRA8 985 aaKnown RBP23.42■■□□□ 1.34
RTCA-201ENST00000260563 PKD2L1Q9P0L9 805 aa23.42■■□□□ 1.34
RTCA-201ENST00000260563 RCOR1Q9UKL0 485 aa23.42■■□□□ 1.34
RTCA-201ENST00000260563 GNEQ9Y223 722 aaKnown RBP23.42■■□□□ 1.34
RTCA-201ENST00000260563 ELP1O95163 1332 aa23.41■■□□□ 1.34
RTCA-201ENST00000260563 WNT7AO00755 349 aa23.41■■□□□ 1.34
RTCA-201ENST00000260563 SLC37A4O43826 429 aa23.41■■□□□ 1.34
RTCA-201ENST00000260563 DUSP11O75319 330 aaKnown RBP23.41■■□□□ 1.34
RTCA-201ENST00000260563 ORC2Q13416 577 aaPredicted RBP23.41■■□□□ 1.34
RTCA-201ENST00000260563 TMEM63BQ5T3F8 832 aa23.41■■□□□ 1.34
RTCA-201ENST00000260563 TLK2Q86UE8 772 aa23.41■■□□□ 1.34
RTCA-201ENST00000260563 LINC00301Q8NCQ3 95 aa23.41■■□□□ 1.34
RTCA-201ENST00000260563 AGO4Q9HCK5 861 aaKnown RBP23.41■■□□□ 1.34
RTCA-201ENST00000260563 CEP131Q9UPN4 1083 aa23.41■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms