RNA–Protein interactions for RNA: ENST00000259808.8

RIPK1-201, Transcript of receptor interacting serine/threonine kinase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RIPK1, Length 4,160 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK1-201ENST00000259808 MAGOHBQ96A72 148 aaKnown RBP16.63■□□□□ 0.25
RIPK1-201ENST00000259808 BPIFA3Q9BQP9 254 aa16.63■□□□□ 0.25
RIPK1-201ENST00000259808 AMNQ9BXJ7 453 aa16.63■□□□□ 0.25
RIPK1-201ENST00000259808 GCNT4Q9P109 453 aa16.63■□□□□ 0.25
RIPK1-201ENST00000259808 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.63■□□□□ 0.25
RIPK1-201ENST00000259808 JRKLQ9Y4A0 524 aa16.63■□□□□ 0.25
RIPK1-201ENST00000259808 DIP2BQ9P265 1576 aa16.63■□□□□ 0.25
RIPK1-201ENST00000259808 TNS3Q68CZ2 1445 aa16.63■□□□□ 0.25
RIPK1-201ENST00000259808 ATF7P17544 494 aaPredicted RBP16.63■□□□□ 0.25
RIPK1-201ENST00000259808 TRIM28Q13263 835 aaKnown RBP16.63■□□□□ 0.25
RIPK1-201ENST00000259808 PPP1R21Q6ZMI0 780 aa16.63■□□□□ 0.25
RIPK1-201ENST00000259808 ILDR1Q86SU0 546 aaPredicted RBP16.63■□□□□ 0.25
RIPK1-201ENST00000259808 MXD3Q9BW11 206 aa16.63■□□□□ 0.25
RIPK1-201ENST00000259808 DIP2AQ14689 1571 aa16.62■□□□□ 0.25
RIPK1-201ENST00000259808 NPHP3-ACAD11A0A0J9YXS1 232 aa16.62■□□□□ 0.25
RIPK1-201ENST00000259808 TOB1P50616 345 aaPredicted RBP16.62■□□□□ 0.25
RIPK1-201ENST00000259808 ALKBH5Q6P6C2 394 aaKnown RBP16.62■□□□□ 0.25
RIPK1-201ENST00000259808 RETREG2Q8NC44 543 aa16.62■□□□□ 0.25
RIPK1-201ENST00000259808 MS4A14Q96JA4 679 aa16.62■□□□□ 0.25
RIPK1-201ENST00000259808 EIF4ENIF1Q9NRA8 985 aaKnown RBP16.62■□□□□ 0.25
RIPK1-201ENST00000259808 FRMD3A2A2Y4 597 aa16.62■□□□□ 0.25
RIPK1-201ENST00000259808 TRIM66O15016 1216 aa16.62■□□□□ 0.25
RIPK1-201ENST00000259808 NYAP1Q6ZVC0 841 aa16.62■□□□□ 0.25
RIPK1-201ENST00000259808 RASGRP2Q7LDG7 609 aa16.62■□□□□ 0.25
RIPK1-201ENST00000259808 FAM186BQ8IYM0 893 aa16.62■□□□□ 0.25
RIPK1-201ENST00000259808 ZNF579Q8NAF0 562 aaKnown RBP16.62■□□□□ 0.25
RIPK1-201ENST00000259808 THOC1Q96FV9 657 aaKnown RBP16.62■□□□□ 0.25
RIPK1-201ENST00000259808 TBK1Q9UHD2 729 aa16.62■□□□□ 0.25
RIPK1-201ENST00000259808 CSF1RP07333 972 aa16.62■□□□□ 0.25
RIPK1-201ENST00000259808 DHX9Q08211 1270 aaKnown RBP16.62■□□□□ 0.25
RIPK1-201ENST00000259808 E2F5Q15329 346 aa16.62■□□□□ 0.25
RIPK1-201ENST00000259808 VSIG1Q86XK7 387 aa16.62■□□□□ 0.25
RIPK1-201ENST00000259808 SEPT12Q8IYM1 358 aa16.62■□□□□ 0.25
RIPK1-201ENST00000259808 ADD3Q9UEY8 706 aaKnown RBP16.62■□□□□ 0.25
RIPK1-201ENST00000259808 DUSP10Q9Y6W6 482 aa16.62■□□□□ 0.25
RIPK1-201ENST00000259808 MYO1CO00159 1063 aa16.61■□□□□ 0.25
RIPK1-201ENST00000259808 ATP2A1O14983 1001 aa16.61■□□□□ 0.25
RIPK1-201ENST00000259808 CLTAP09496 248 aa16.61■□□□□ 0.25
RIPK1-201ENST00000259808 ZNF211Q13398 564 aaPredicted RBP16.61■□□□□ 0.25
RIPK1-201ENST00000259808 PTPAQ15257 358 aa16.61■□□□□ 0.25
RIPK1-201ENST00000259808 ALX1Q15699 326 aa16.61■□□□□ 0.25
RIPK1-201ENST00000259808 KCTD19Q17RG1 926 aaPredicted RBP16.61■□□□□ 0.25
RIPK1-201ENST00000259808 GALNT17Q6IS24 598 aa16.61■□□□□ 0.25
RIPK1-201ENST00000259808 NSUN4Q96CB9 384 aaKnown RBP16.61■□□□□ 0.25
RIPK1-201ENST00000259808 KDM3AQ9Y4C1 1321 aa16.61■□□□□ 0.25
RIPK1-201ENST00000259808 GYPCP04921 128 aa16.61■□□□□ 0.25
RIPK1-201ENST00000259808 ATP2C1P98194 919 aaPredicted RBP16.61■□□□□ 0.25
RIPK1-201ENST00000259808 ZNF746Q6NUN9 644 aaPredicted RBP16.61■□□□□ 0.25
RIPK1-201ENST00000259808 NAP1L3Q99457 506 aaPredicted RBP16.61■□□□□ 0.25
RIPK1-201ENST00000259808 LEMD3Q9Y2U8 911 aa16.61■□□□□ 0.25
RIPK1-201ENST00000259808 PCP11498 1178 aaKnown RBP16.61■□□□□ 0.25
RIPK1-201ENST00000259808 NFIXQ14938 502 aa16.61■□□□□ 0.25
RIPK1-201ENST00000259808 EARS2Q5JPH6 523 aaKnown RBP16.61■□□□□ 0.25
RIPK1-201ENST00000259808 BSPRYQ5W0U4 402 aa16.61■□□□□ 0.25
RIPK1-201ENST00000259808 ARL6IP4Q66PJ3 421 aaKnown RBP16.61■□□□□ 0.25
RIPK1-201ENST00000259808 TBC1D31Q96DN5 1066 aa16.61■□□□□ 0.25
RIPK1-201ENST00000259808 AK8Q96MA6 479 aa16.61■□□□□ 0.25
RIPK1-201ENST00000259808 NAP1L4Q99733 375 aaKnown RBP16.61■□□□□ 0.25
RIPK1-201ENST00000259808 STK36Q9NRP7 1315 aa16.61■□□□□ 0.25
RIPK1-201ENST00000259808 OTUD6AQ7L8S5 288 aa16.6■□□□□ 0.25
RIPK1-201ENST00000259808 SH2D3CQ8N5H7 860 aa16.6■□□□□ 0.25
RIPK1-201ENST00000259808 DDX47Q9H0S4 455 aaKnown RBP16.6■□□□□ 0.25
RIPK1-201ENST00000259808 THAP9Q9H5L6 903 aa16.6■□□□□ 0.25
RIPK1-201ENST00000259808 VPS37BQ9H9H4 285 aa16.6■□□□□ 0.25
RIPK1-201ENST00000259808 CD209Q9NNX6 404 aa16.6■□□□□ 0.25
RIPK1-201ENST00000259808 MLXIPLQ9NP71 852 aa16.6■□□□□ 0.25
RIPK1-201ENST00000259808 PPLO60437 1756 aa16.6■□□□□ 0.25
RIPK1-201ENST00000259808 SEMA3EO15041 775 aa16.6■□□□□ 0.25
RIPK1-201ENST00000259808 TRAF3IP1Q8TDR0 691 aaPredicted RBP16.6■□□□□ 0.25
RIPK1-201ENST00000259808 NUCKS1Q9H1E3 243 aaKnown RBP16.6■□□□□ 0.25
RIPK1-201ENST00000259808 TSKSQ9UJT2 592 aa16.6■□□□□ 0.25
RIPK1-201ENST00000259808 NOVA2Q9UNW9 492 aaKnown RBP16.6■□□□□ 0.25
RIPK1-201ENST00000259808 UTYO14607 1347 aa16.6■□□□□ 0.25
RIPK1-201ENST00000259808 PXDNQ92626 1479 aa16.6■□□□□ 0.25
RIPK1-201ENST00000259808 CTIFO43310 598 aaKnown RBP16.6■□□□□ 0.25
RIPK1-201ENST00000259808 ITPK1Q13572 414 aa16.6■□□□□ 0.25
RIPK1-201ENST00000259808 ARHGEF1Q92888 912 aaKnown RBP16.6■□□□□ 0.25
RIPK1-201ENST00000259808 KCNB2Q92953 911 aa16.6■□□□□ 0.25
RIPK1-201ENST00000259808 EXOC4Q96A65 974 aa16.6■□□□□ 0.25
RIPK1-201ENST00000259808 PLEKP08567 350 aaPredicted RBP16.59■□□□□ 0.25
RIPK1-201ENST00000259808 ADCY8P40145 1251 aa16.59■□□□□ 0.25
RIPK1-201ENST00000259808 SEPT2Q15019 361 aa16.59■□□□□ 0.25
RIPK1-201ENST00000259808 CDC37Q16543 378 aaPredicted RBP16.59■□□□□ 0.25
RIPK1-201ENST00000259808 CYP4F22Q6NT55 531 aa16.59■□□□□ 0.25
RIPK1-201ENST00000259808 INTS8Q75QN2 995 aaKnown RBP16.59■□□□□ 0.25
RIPK1-201ENST00000259808 DNAAF5Q86Y56 855 aa16.59■□□□□ 0.25
RIPK1-201ENST00000259808 CCDC170Q8IYT3 715 aa16.59■□□□□ 0.25
RIPK1-201ENST00000259808 KIFAP3Q92845 792 aa16.59■□□□□ 0.25
RIPK1-201ENST00000259808 LARSQ9P2J5 1176 aaKnown RBP16.59■□□□□ 0.25
RIPK1-201ENST00000259808 POLR2MP0CAP2 368 aa16.59■□□□□ 0.25
RIPK1-201ENST00000259808 AKR1B1P15121 316 aa16.59■□□□□ 0.25
RIPK1-201ENST00000259808 TMOD1P28289 359 aa16.59■□□□□ 0.25
RIPK1-201ENST00000259808 NR1I3Q14994 352 aa16.59■□□□□ 0.25
RIPK1-201ENST00000259808 SFR1Q86XK3 245 aa16.59■□□□□ 0.25
RIPK1-201ENST00000259808 REXO1L1PQ8IX06 675 aa16.59■□□□□ 0.25
RIPK1-201ENST00000259808 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.59■□□□□ 0.25
RIPK1-201ENST00000259808 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.59■□□□□ 0.25
RIPK1-201ENST00000259808 A0A1B0GTH6 734 aa16.59■□□□□ 0.25
RIPK1-201ENST00000259808 GNA14O95837 355 aa16.59■□□□□ 0.25
RIPK1-201ENST00000259808 GH2P01242 217 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms