RNA–Protein interactions for RNA: ENST00000256552.10

TRPM1-201, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRPM1, Length 5,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-201ENST00000256552 RAPGEF6Q8TEU7 1601 aa11.09□□□□□ -0.63
TRPM1-201ENST00000256552 SUPT3HO75486 399 aa11.09□□□□□ -0.63
TRPM1-201ENST00000256552 ESRRAP11474 423 aaPredicted RBP11.09□□□□□ -0.63
TRPM1-201ENST00000256552 PTGISQ16647 500 aa11.09□□□□□ -0.63
TRPM1-201ENST00000256552 ANLNQ9NQW6 1124 aa11.09□□□□□ -0.63
TRPM1-201ENST00000256552 ZAP70P43403 619 aa11.09□□□□□ -0.63
TRPM1-201ENST00000256552 AKNAD1Q5T1N1 836 aa11.09□□□□□ -0.63
TRPM1-201ENST00000256552 FAM47EQ6ZV65 393 aa11.09□□□□□ -0.63
TRPM1-201ENST00000256552 MYOCDQ8IZQ8 938 aa11.09□□□□□ -0.63
TRPM1-201ENST00000256552 SPATA4Q8NEY3 305 aa11.09□□□□□ -0.63
TRPM1-201ENST00000256552 CLMNQ96JQ2 1002 aa11.09□□□□□ -0.63
TRPM1-201ENST00000256552 RNPC3Q96LT9 517 aaKnown RBP11.09□□□□□ -0.63
TRPM1-201ENST00000256552 METTL22Q9BUU2 404 aaPredicted RBP11.09□□□□□ -0.63
TRPM1-201ENST00000256552 SYCP2Q9BX26 1530 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 FAM107AO95990 144 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 LONP1P36776 959 aaKnown RBP11.08□□□□□ -0.64
TRPM1-201ENST00000256552 MLH1P40692 756 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 DR1Q01658 176 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 PALM2Q8IXS6 379 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 IFNL2Q8IZJ0 200 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 ZNF654Q8IZM8 581 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 P2RX5Q93086 422 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 NR1H4Q96RI1 486 aaPredicted RBP11.08□□□□□ -0.64
TRPM1-201ENST00000256552 CARD9Q9H257 536 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 FOXP1Q9H334 677 aaPredicted RBP11.08□□□□□ -0.64
TRPM1-201ENST00000256552 PDP2Q9P2J9 529 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 WDR46O15213 610 aaKnown RBP11.08□□□□□ -0.64
TRPM1-201ENST00000256552 ATP6V1G2O95670 118 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 BAG3O95817 575 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 KRT14P02533 472 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 ATP4AP20648 1035 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 SNX1Q13596 522 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 GEN1Q17RS7 908 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 DHTKD1Q96HY7 919 aaPredicted RBP11.08□□□□□ -0.64
TRPM1-201ENST00000256552 AIFM3Q96NN9 605 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 GJB4Q9NTQ9 266 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 GIMAP4Q9NUV9 329 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 LIN7AO14910 233 aaPredicted RBP11.08□□□□□ -0.64
TRPM1-201ENST00000256552 PALMO75781 387 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 HOXB7P09629 217 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 SERPINB4P48594 390 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 USP33Q8TEY7 942 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 PAWRQ96IZ0 340 aaKnown RBP11.08□□□□□ -0.64
TRPM1-201ENST00000256552 THAP9Q9H5L6 903 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 MLXIPLQ9NP71 852 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 TMOD3Q9NYL9 352 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 CTTNBP2Q8WZ74 1663 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 POTEB3A0JP26 581 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 SART1O43290 800 aaKnown RBP11.08□□□□□ -0.64
TRPM1-201ENST00000256552 NOP14P78316 857 aaKnown RBP11.08□□□□□ -0.64
TRPM1-201ENST00000256552 POTEBQ6S5H4 581 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 TMTC3Q6ZXV5 915 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 CTAGE3PQ8IX95 158 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.08□□□□□ -0.64
TRPM1-201ENST00000256552 SIKE1Q9BRV8 207 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 NUB1Q9Y5A7 615 aa11.08□□□□□ -0.64
TRPM1-201ENST00000256552 GIPC1O14908 333 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 GYG2O15488 501 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 NONOQ15233 471 aaKnown RBP eCLIP11.07□□□□□ -0.64
TRPM1-201ENST00000256552 FBXO31Q5XUX0 539 aaPredicted RBP11.07□□□□□ -0.64
TRPM1-201ENST00000256552 PROSER2Q86WR7 435 aaPredicted RBP11.07□□□□□ -0.64
TRPM1-201ENST00000256552 ATP11CQ8NB49 1132 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 MBD5Q9P267 1494 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 RAP1GDS1P52306 607 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 RASGRP2Q7LDG7 609 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 TC2NQ8N9U0 490 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 NRBF2Q96F24 287 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 TAF1DQ9H5J8 278 aaPredicted RBP11.07□□□□□ -0.64
TRPM1-201ENST00000256552 XRCC5P13010 732 aaKnown RBP11.07□□□□□ -0.64
TRPM1-201ENST00000256552 KCNA3P22001 575 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 ATICP31939 592 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 NEK2P51955 445 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 GRAMD1BQ3KR37 738 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 TTLL7Q6ZT98 887 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 FANCBQ8NB91 859 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 CCDC87Q9NVE4 849 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 MCM9Q9NXL9 1143 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 SRPRBQ9Y5M8 271 aaKnown RBP11.07□□□□□ -0.64
TRPM1-201ENST00000256552 IQCA1LA6NCM1 817 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 ATP6V1G1O75348 118 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 SPAG7O75391 227 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 GCKRQ14397 625 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 LRRC14Q15048 493 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 RAD9BQ6WBX8 426 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 RBM12BQ8IXT5 1001 aaKnown RBP11.07□□□□□ -0.64
TRPM1-201ENST00000256552 RUBCNQ92622 972 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 ZIM3Q96PE6 472 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 MAK16Q9BXY0 300 aaKnown RBP11.07□□□□□ -0.64
TRPM1-201ENST00000256552 TMOD4Q9NZQ9 345 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 ZNF532Q9HCE3 1301 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 ECEL1O95672 775 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 BCRP11274 1271 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 YTHDF3Q7Z739 585 aaKnown RBP11.07□□□□□ -0.64
TRPM1-201ENST00000256552 FBXL5Q9UKA1 691 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 PCDHB6Q9Y5E3 794 aa11.07□□□□□ -0.64
TRPM1-201ENST00000256552 CFAP74Q9C0B2 1584 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 ARHGAP10A1A4S6 786 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 MAP2K7O14733 419 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 LIN9Q5TKA1 542 aa11.06□□□□□ -0.64
TRPM1-201ENST00000256552 TRIML2Q8N7C3 387 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms