RNA–Protein interactions for RNA: ENST00000255622.10

PDE6B-201, Transcript of phosphodiesterase 6B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDE6B, Length 3,280 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-201ENST00000255622 SPDYE1Q8NFV5 336 aaPredicted RBP12.5□□□□□ -0.41
PDE6B-201ENST00000255622 P2RX5Q93086 422 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 COA7Q96BR5 231 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 RRP36Q96EU6 259 aaKnown RBP12.5□□□□□ -0.41
PDE6B-201ENST00000255622 PCMTD1Q96MG8 357 aaPredicted RBP12.5□□□□□ -0.41
PDE6B-201ENST00000255622 UIMC1Q96RL1 719 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 SPZ1Q9BXG8 430 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 LACRTQ9GZZ8 138 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 TMX4Q9H1E5 349 aaPredicted RBP12.5□□□□□ -0.41
PDE6B-201ENST00000255622 CTAGE15A4D2H0 777 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 ATP8B1O43520 1251 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 CTAGE8P0CG41 777 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 SRGNP10124 158 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 CYP27A1Q02318 531 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 CCDC122Q5T0U0 273 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 CTAGE6Q86UF2 777 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 TRIM42Q8IWZ5 723 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 CTAGE4Q8IX94 777 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 LRRC47Q8N1G4 583 aaKnown RBP12.5□□□□□ -0.41
PDE6B-201ENST00000255622 GJA10Q969M2 543 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 TTYH3Q9C0H2 523 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 CENPHQ9H3R5 247 aa12.5□□□□□ -0.41
PDE6B-201ENST00000255622 SEC63Q9UGP8 760 aaKnown RBP12.5□□□□□ -0.41
PDE6B-201ENST00000255622 A0A1W2PQC6 194 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 LAD1O00515 517 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 SLC37A4O43826 429 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 N4BP1O75113 896 aaKnown RBP12.49□□□□□ -0.41
PDE6B-201ENST00000255622 PLEKP08567 350 aaPredicted RBP12.49□□□□□ -0.41
PDE6B-201ENST00000255622 RHBDL3P58872 404 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 FOXD4Q12950 439 aaPredicted RBP12.49□□□□□ -0.41
PDE6B-201ENST00000255622 PICALMQ13492 652 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 BRD3Q15059 726 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 MIIPQ5JXC2 388 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 MFSD14BQ5SR56 506 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 TRAPPC3LQ5T215 181 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 KRT25Q7Z3Z0 450 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 CEP57Q86XR8 500 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 CAPZA3Q96KX2 299 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 ARPC5LQ9BPX5 153 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 RANBP17Q9H2T7 1088 aaKnown RBP12.49□□□□□ -0.41
PDE6B-201ENST00000255622 PDE11AQ9HCR9 933 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 C6orf50Q9HD87 102 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 STK24Q9Y6E0 443 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 TDP2O95551 362 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 MTIF2P46199 727 aaKnown RBP12.49□□□□□ -0.41
PDE6B-201ENST00000255622 CCDC181Q5TID7 509 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 PRR5LQ6MZQ0 368 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 DYMQ7RTS9 669 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 MSANTD4Q8NCY6 345 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 NEDD1Q8NHV4 660 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 RPGRQ92834 1020 aaKnown RBP12.49□□□□□ -0.41
PDE6B-201ENST00000255622 SEMA6BQ9H3T3 888 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 POTEMA6NI47 508 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 MAP2K7O14733 419 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 SLURP2P0DP57 97 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 CCNE1P24864 410 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 DNM2P50570 870 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 SOGA3Q5TF21 947 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 KCNV1Q6PIU1 500 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 REXO1Q8N1G1 1221 aaKnown RBP12.49□□□□□ -0.41
PDE6B-201ENST00000255622 DRAXINQ8NBI3 349 aaPredicted RBP12.49□□□□□ -0.41
PDE6B-201ENST00000255622 SPDL1Q96EA4 605 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 DHTKD1Q96HY7 919 aaPredicted RBP12.49□□□□□ -0.41
PDE6B-201ENST00000255622 NOC4LQ9BVI4 516 aaKnown RBP12.49□□□□□ -0.41
PDE6B-201ENST00000255622 RAB21Q9UL25 225 aa12.49□□□□□ -0.41
PDE6B-201ENST00000255622 GPR75-ASB3A0A0A6YYF3 556 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 F8W031 263 aaPredicted RBP12.48□□□□□ -0.41
PDE6B-201ENST00000255622 EPHB6O15197 1021 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 RGL2O15211 777 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 LDHCP07864 332 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 PECAM1P16284 738 aaPredicted RBP12.48□□□□□ -0.41
PDE6B-201ENST00000255622 CRYMQ14894 314 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 WHAMMP3Q1A5X7 153 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 GLIS3Q8NEA6 775 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 MMS19Q96T76 1030 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 NUDT12Q9BQG2 462 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 NHEJ1Q9H9Q4 299 aaPredicted RBP12.48□□□□□ -0.41
PDE6B-201ENST00000255622 IQCJ-SCHIP1C9J366 451 aaPredicted RBP12.48□□□□□ -0.41
PDE6B-201ENST00000255622 EDIL3O43854 480 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 MYL1P05976 194 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 GRB10Q13322 594 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 VPS72Q15906 364 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 TSR1Q2NL82 804 aaKnown RBP12.48□□□□□ -0.41
PDE6B-201ENST00000255622 TRAPPC11Q7Z392 1133 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 KRT26Q7Z3Y9 468 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 KIAA1328Q86T90 577 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 NCAPG2Q86XI2 1143 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 AK8Q96MA6 479 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 C7orf25Q9BPX7 421 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 LZTS2Q9BRK4 669 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 MYO1AQ9UBC5 1043 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 POLLQ9UGP5 575 aa12.48□□□□□ -0.41
PDE6B-201ENST00000255622 MACROD2A1Z1Q3 448 aa12.47□□□□□ -0.41
PDE6B-201ENST00000255622 ZNF185O15231 689 aa12.47□□□□□ -0.41
PDE6B-201ENST00000255622 GNA11P29992 359 aa12.47□□□□□ -0.41
PDE6B-201ENST00000255622 CD151P48509 253 aa12.47□□□□□ -0.41
PDE6B-201ENST00000255622 SMCR8Q8TEV9 937 aaPredicted RBP12.47□□□□□ -0.41
PDE6B-201ENST00000255622 GPCPD1Q9NPB8 672 aa12.47□□□□□ -0.41
PDE6B-201ENST00000255622 BLOC1S4Q9NUP1 217 aa12.47□□□□□ -0.41
PDE6B-201ENST00000255622 MYMKA6NI61 221 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms