RNA–Protein interactions for RNA: ENST00000253812.7

PCDHGA3-201, Transcript of protocadherin gamma subfamily A, 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA3, Length 4,771 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA3-201ENST00000253812 KIF2CQ99661 725 aa14.24□□□□□ -0.13
PCDHGA3-201ENST00000253812 CARD10Q9BWT7 1032 aa14.24□□□□□ -0.13
PCDHGA3-201ENST00000253812 NT5C3AQ9H0P0 336 aa14.24□□□□□ -0.13
PCDHGA3-201ENST00000253812 ECT2Q9H8V3 914 aa14.24□□□□□ -0.13
PCDHGA3-201ENST00000253812 ANAPC5Q9UJX4 755 aa14.24□□□□□ -0.13
PCDHGA3-201ENST00000253812 SNX5Q9Y5X3 404 aa14.24□□□□□ -0.13
PCDHGA3-201ENST00000253812 NEURL1BA8MQ27 555 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 GSPT1P15170 499 aaKnown RBP14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 PLCB4Q15147 1175 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 RNF169Q8NCN4 708 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 XAGE2Q96GT9 111 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 TBK1Q9UHD2 729 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 ZFP69BQ9UJL9 534 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 PALD1Q9ULE6 856 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 IGSF1Q8N6C5 1336 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 KIF1BO60333 1816 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 ANO9A1A5B4 782 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 HAUS5O94927 633 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 TEDDM1Q5T9Z0 273 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 SH3GL2Q99962 352 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 C10orf88Q9H8K7 445 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 ZNF229Q9UJW7 825 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 PCDHB13Q9Y5F0 798 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 ESRRBO95718 433 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 CCND1P24385 295 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 STAT2P52630 851 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 TTLL11Q8NHH1 800 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 TTC1Q99614 292 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 SYNMO15061 1565 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 ESYT2A0FGR8 921 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 ARHGEF35A5YM69 484 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 RIMBP2O15034 1052 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 DNAJC5Q9H3Z4 198 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 RCOR1Q9UKL0 485 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 TRAF3IP3Q9Y228 551 aa14.23□□□□□ -0.13
PCDHGA3-201ENST00000253812 CFLARO15519 480 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 GCNT3O95395 438 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 SERPINB3P29508 390 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 MAGOHP61326 146 aaKnown RBP14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 SLC39A14Q15043 492 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 CNBD1Q8NA66 436 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 MAML1Q92585 1016 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 ING2Q9H160 280 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 VIPAS39Q9H9C1 493 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 CACYBPQ9HB71 228 aaKnown RBP14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 TBC1D7Q9P0N9 293 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 PPARGC1AQ9UBK2 798 aaKnown RBP14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 TAF5LO75529 589 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 SNUPNO95149 360 aaKnown RBP14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 RPN1P04843 607 aaKnown RBP14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 GJC2Q5T442 439 aaPredicted RBP14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 WDR75Q8IWA0 830 aaKnown RBP14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 ZNF653Q96CK0 615 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 GRAMD1AQ96CP6 724 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 ATP6V1G3Q96LB4 118 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 MRPL44Q9H9J2 332 aaKnown RBP14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 ZNF521Q96K83 1311 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 A0A0G2JND7 137 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 MBD4O95243 580 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 CD19P15391 556 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 HDAC11Q96DB2 347 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 ZBTB10Q96DT7 871 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 IPO5O00410 1097 aaKnown RBP14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 AP1B1Q10567 949 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 TMEM154Q6P9G4 183 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 TMCO5AQ8N6Q1 288 aa14.22□□□□□ -0.13
PCDHGA3-201ENST00000253812 NR1H3Q13133 447 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 MED21Q13503 144 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 DSCC1Q9BVC3 393 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 TET3O43151 1660 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 KCNA3P22001 575 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 CCDC15Q0P6D6 951 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 LAMB3Q13751 1172 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 SGO2Q562F6 1265 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 CNOT6LQ96LI5 555 aaKnown RBP14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 OSBPL5Q9H0X9 879 aaPredicted RBP14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 POLR3EQ9NVU0 708 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 PARP3Q9Y6F1 533 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 SYCE1LA8MT33 242 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 EIF3HO15372 352 aaKnown RBP eCLIP14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 N4BP1O75113 896 aaKnown RBP14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 PPP6R2O75170 966 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 NCF2P19878 526 aaPredicted RBP14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 DR1Q01658 176 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 TCIRG1Q13488 830 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 PUM3Q15397 648 aaKnown RBP14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 C10orf76Q5T2E6 689 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 MYCT1Q8N699 235 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 TMEM87AQ8NBN3 555 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 ZNF280CQ8ND82 737 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 ZC3H15Q8WU90 426 aaKnown RBP14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 EPN3Q9H201 632 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 FAM96AQ9H5X1 160 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 HAUS2Q9NVX0 235 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 UTP6Q9NYH9 597 aaKnown RBP14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 USP21Q9UK80 565 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 ATP11BQ9Y2G3 1177 aa14.21□□□□□ -0.13
PCDHGA3-201ENST00000253812 ARHGAP31Q2M1Z3 1444 aa14.21□□□□□ -0.14
PCDHGA3-201ENST00000253812 B4DLN1 442 aa14.21□□□□□ -0.14
PCDHGA3-201ENST00000253812 HNRNPCL1O60812 293 aaKnown RBP14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms