RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 FAM153BP0C7A2 387 aa17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 MTMR3Q13615 1198 aa17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 FAM153CQ494X1 144 aa17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 ACTR5Q9H9F9 607 aaPredicted RBP17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 TFCP2L1Q9NZI6 479 aa17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 FAM153AQ9UHL3 310 aa17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 SAP30BPQ9UHR5 308 aaKnown RBP17.44■□□□□ 0.38
SLC6A8-201ENST00000253122 LRRC10BA6NIK2 292 aa17.43■□□□□ 0.38
SLC6A8-201ENST00000253122 SMIM22K7EJ46 135 aa17.43■□□□□ 0.38
SLC6A8-201ENST00000253122 TXNRD1Q16881 649 aa17.43■□□□□ 0.38
SLC6A8-201ENST00000253122 GLE1Q53GS7 698 aaKnown RBP17.43■□□□□ 0.38
SLC6A8-201ENST00000253122 TTMPQ5BVD1 217 aa17.43■□□□□ 0.38
SLC6A8-201ENST00000253122 CREG2Q8IUH2 290 aa17.43■□□□□ 0.38
SLC6A8-201ENST00000253122 TEX2Q8IWB9 1127 aa17.43■□□□□ 0.38
SLC6A8-201ENST00000253122 PDS5AQ29RF7 1337 aaKnown RBP17.43■□□□□ 0.38
SLC6A8-201ENST00000253122 ABCB4P21439 1286 aa17.43■□□□□ 0.38
SLC6A8-201ENST00000253122 HAUS3Q68CZ6 603 aa17.43■□□□□ 0.38
SLC6A8-201ENST00000253122 CCDC197Q8NCU1 140 aa17.43■□□□□ 0.38
SLC6A8-201ENST00000253122 GOLPH3Q9H4A6 298 aa17.43■□□□□ 0.38
SLC6A8-201ENST00000253122 PHF20L1A8MW92 1017 aa17.43■□□□□ 0.38
SLC6A8-201ENST00000253122 SH3RF1Q7Z6J0 888 aa17.43■□□□□ 0.38
SLC6A8-201ENST00000253122 FMNL3Q8IVF7 1028 aa17.43■□□□□ 0.38
SLC6A8-201ENST00000253122 MYOCDQ8IZQ8 938 aa17.43■□□□□ 0.38
SLC6A8-201ENST00000253122 SPATA20Q8TB22 786 aa17.43■□□□□ 0.38
SLC6A8-201ENST00000253122 IQCDQ96DY2 449 aa17.43■□□□□ 0.38
SLC6A8-201ENST00000253122 LRRC27Q9C0I9 530 aa17.43■□□□□ 0.38
SLC6A8-201ENST00000253122 RGS16O15492 202 aaPredicted RBP17.42■□□□□ 0.38
SLC6A8-201ENST00000253122 CRKLP46109 303 aaKnown RBP17.42■□□□□ 0.38
SLC6A8-201ENST00000253122 CACNB1Q02641 598 aaPredicted RBP17.42■□□□□ 0.38
SLC6A8-201ENST00000253122 CALCRLQ16602 461 aa17.42■□□□□ 0.38
SLC6A8-201ENST00000253122 PDXDC2PQ6P474 469 aa17.42■□□□□ 0.38
SLC6A8-201ENST00000253122 TRMT1LQ7Z2T5 733 aaKnown RBP17.42■□□□□ 0.38
SLC6A8-201ENST00000253122 TMEM60Q9H2L4 133 aa17.42■□□□□ 0.38
SLC6A8-201ENST00000253122 RNF14Q9UBS8 474 aa17.42■□□□□ 0.38
SLC6A8-201ENST00000253122 ZNF652Q9Y2D9 606 aa17.42■□□□□ 0.38
SLC6A8-201ENST00000253122 SLCO1A2P46721 670 aa17.42■□□□□ 0.38
SLC6A8-201ENST00000253122 CTNNBL1Q8WYA6 563 aaPredicted RBP17.42■□□□□ 0.38
SLC6A8-201ENST00000253122 CYFIP2Q96F07 1278 aa17.42■□□□□ 0.38
SLC6A8-201ENST00000253122 MYCNP04198 464 aaPredicted RBP17.42■□□□□ 0.38
SLC6A8-201ENST00000253122 SCP2P22307 547 aa17.42■□□□□ 0.38
SLC6A8-201ENST00000253122 CHRNDQ07001 517 aa17.42■□□□□ 0.38
SLC6A8-201ENST00000253122 HOOK3Q86VS8 718 aa17.42■□□□□ 0.38
SLC6A8-201ENST00000253122 EIF4E1BA6NMX2 242 aaKnown RBP17.41■□□□□ 0.38
SLC6A8-201ENST00000253122 CYP2D6P10635 497 aa17.41■□□□□ 0.38
SLC6A8-201ENST00000253122 HVCN1Q96D96 273 aa17.41■□□□□ 0.38
SLC6A8-201ENST00000253122 CETN3O15182 167 aa17.41■□□□□ 0.38
SLC6A8-201ENST00000253122 NEFHP12036 1026 aa17.41■□□□□ 0.38
SLC6A8-201ENST00000253122 HSPA1LP34931 641 aa17.41■□□□□ 0.38
SLC6A8-201ENST00000253122 MYO1EQ12965 1108 aa17.41■□□□□ 0.38
SLC6A8-201ENST00000253122 UBE4AQ14139 1066 aa17.41■□□□□ 0.38
SLC6A8-201ENST00000253122 PKN1Q16512 942 aa17.41■□□□□ 0.38
SLC6A8-201ENST00000253122 KRT25Q7Z3Z0 450 aa17.41■□□□□ 0.38
SLC6A8-201ENST00000253122 U2AF1L4Q8WU68 220 aaKnown RBP17.41■□□□□ 0.38
SLC6A8-201ENST00000253122 THOC1Q96FV9 657 aaKnown RBP17.41■□□□□ 0.38
SLC6A8-201ENST00000253122 TAOK3Q9H2K8 898 aa17.41■□□□□ 0.38
SLC6A8-201ENST00000253122 ARHGAP20Q9P2F6 1191 aa17.41■□□□□ 0.38
SLC6A8-201ENST00000253122 SLIT2O94813 1529 aa17.41■□□□□ 0.38
SLC6A8-201ENST00000253122 KCNQ2O43526 872 aa17.41■□□□□ 0.38
SLC6A8-201ENST00000253122 DENND2CQ68D51 928 aa17.41■□□□□ 0.38
SLC6A8-201ENST00000253122 FAM107AO95990 144 aa17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 SARNPP82979 210 aaKnown RBP17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 PFKFB3Q16875 520 aaPredicted RBP17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 ANKRD42Q8N9B4 389 aa17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 ELAC2Q9BQ52 826 aaKnown RBP17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 FBXL5Q9UKA1 691 aa17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 PLCH1Q4KWH8 1693 aa17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 RAD51CO43502 376 aa17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 NEK8Q86SG6 692 aa17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 NUCKS1Q9H1E3 243 aaKnown RBP17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 TAF1DQ9H5J8 278 aaPredicted RBP17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 LAMB4A4D0S4 1761 aa17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 N4BP2Q86UW6 1770 aaPredicted RBP17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 KLRF2D3W0D1 207 aa17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 PDHBP11177 359 aa17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 PLTPP55058 493 aa17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 LLGL1Q15334 1064 aa17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 GIMAP8Q8ND71 665 aaPredicted RBP17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 TRIM9Q9C026 710 aa17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 ZNF287Q9HBT7 754 aa17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 INTS9Q9NV88 658 aaKnown RBP17.4■□□□□ 0.38
SLC6A8-201ENST00000253122 TRIM28Q13263 835 aaKnown RBP17.39■□□□□ 0.38
SLC6A8-201ENST00000253122 TTI2Q6NXR4 508 aa17.39■□□□□ 0.38
SLC6A8-201ENST00000253122 CCDC65Q8IXS2 484 aa17.39■□□□□ 0.38
SLC6A8-201ENST00000253122 REXO1Q8N1G1 1221 aaKnown RBP17.39■□□□□ 0.38
SLC6A8-201ENST00000253122 SLC4A9Q96Q91 983 aa17.39■□□□□ 0.38
SLC6A8-201ENST00000253122 GGT7Q9UJ14 662 aa17.39■□□□□ 0.38
SLC6A8-201ENST00000253122 RASAL2Q9UJF2 1139 aa17.39■□□□□ 0.38
SLC6A8-201ENST00000253122 PLAGL2Q9UPG8 496 aa17.39■□□□□ 0.38
SLC6A8-201ENST00000253122 PGRMC1O00264 195 aaKnown RBP17.39■□□□□ 0.37
SLC6A8-201ENST00000253122 DAPK3O43293 454 aa17.39■□□□□ 0.37
SLC6A8-201ENST00000253122 FLOT1O75955 427 aa17.39■□□□□ 0.37
SLC6A8-201ENST00000253122 EIF6P56537 245 aaKnown RBP17.39■□□□□ 0.37
SLC6A8-201ENST00000253122 LACTBP83111 547 aaPredicted RBP17.39■□□□□ 0.37
SLC6A8-201ENST00000253122 KCNB1Q14721 858 aa17.39■□□□□ 0.37
SLC6A8-201ENST00000253122 SWT1Q5T5J6 900 aaKnown RBP17.39■□□□□ 0.37
SLC6A8-201ENST00000253122 TRIM68Q6AZZ1 485 aa17.39■□□□□ 0.37
SLC6A8-201ENST00000253122 CASKIN2Q8WXE0 1202 aa17.39■□□□□ 0.37
SLC6A8-201ENST00000253122 LARP4BQ92615 738 aaKnown RBP17.39■□□□□ 0.37
SLC6A8-201ENST00000253122 TRIM6Q9C030 488 aaPredicted RBP17.39■□□□□ 0.37
SLC6A8-201ENST00000253122 ANKIB1Q9P2G1 1089 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms