RNA–Protein interactions for RNA: ENST00000245908.10

SH2D3A-201, Transcript of SH2 domain containing 3A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SH2D3A, Length 2,296 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-201ENST00000245908 NT5C3AQ9H0P0 336 aa23.98■■□□□ 1.43
SH2D3A-201ENST00000245908 LRRC53A6NM62 1247 aa23.98■■□□□ 1.43
SH2D3A-201ENST00000245908 HLA-DOAP06340 250 aa23.98■■□□□ 1.43
SH2D3A-201ENST00000245908 CDC42EP5Q6NZY7 148 aa23.98■■□□□ 1.43
SH2D3A-201ENST00000245908 KCTD1Q719H9 257 aa23.98■■□□□ 1.43
SH2D3A-201ENST00000245908 PCDHA12Q9UN75 941 aa23.98■■□□□ 1.43
SH2D3A-201ENST00000245908 JRKLQ9Y4A0 524 aa23.98■■□□□ 1.43
SH2D3A-201ENST00000245908 TACC1O75410 805 aa23.97■■□□□ 1.43
SH2D3A-201ENST00000245908 HHIPL2Q6UWX4 724 aa23.97■■□□□ 1.43
SH2D3A-201ENST00000245908 ARHGAP27Q6ZUM4 889 aa23.97■■□□□ 1.43
SH2D3A-201ENST00000245908 NEK11Q8NG66 645 aa23.97■■□□□ 1.43
SH2D3A-201ENST00000245908 ZC3H12CQ9C0D7 883 aaKnown RBP23.97■■□□□ 1.43
SH2D3A-201ENST00000245908 MARCH6O60337 910 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 GYS2P54840 703 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 FAM26FQ5R3K3 315 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 PDXDC1Q6P996 788 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 RRAGAQ7L523 313 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 CAGE1Q8TC20 777 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 MXD3Q9BW11 206 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 GLT8D2Q9H1C3 349 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 EHD4Q9H223 541 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 ACBD3Q9H3P7 528 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 DEF6Q9H4E7 631 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 VIPAS39Q9H9C1 493 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 PANK4Q9NVE7 773 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 SNX12Q9UMY4 172 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 COL4A3BPQ9Y5P4 624 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 LRRIQ3A6PVS8 624 aaPredicted RBP23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 PDE2AO00408 941 aaPredicted RBP23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 MPHOSPH10O00566 681 aaKnown RBP23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 ZNF185O15231 689 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 SLC26A4O43511 780 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 SCNN1DP51172 638 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 FKBP3Q00688 224 aaKnown RBP23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 MAP9Q49MG5 647 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 SEPT12Q8IYM1 358 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 GJA10Q969M2 543 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 CCDC17Q96LX7 622 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 JADE2Q9NQC1 790 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 CAPN6Q9Y6Q1 641 aa23.96■■□□□ 1.43
SH2D3A-201ENST00000245908 IQCEQ6IPM2 695 aa23.95■■□□□ 1.43
SH2D3A-201ENST00000245908 BMP2KQ9NSY1 1161 aaPredicted RBP23.95■■□□□ 1.43
SH2D3A-201ENST00000245908 RNF216Q9NWF9 866 aaPredicted RBP23.95■■□□□ 1.43
SH2D3A-201ENST00000245908 AKR1B10O60218 316 aa23.95■■□□□ 1.42
SH2D3A-201ENST00000245908 N4BP1O75113 896 aaKnown RBP23.95■■□□□ 1.42
SH2D3A-201ENST00000245908 ATP2B2Q01814 1243 aa23.95■■□□□ 1.42
SH2D3A-201ENST00000245908 KCNMA1Q12791 1236 aa23.95■■□□□ 1.42
SH2D3A-201ENST00000245908 APOBEC3HQ6NTF7 200 aaKnown RBP23.95■■□□□ 1.42
SH2D3A-201ENST00000245908 SMCR8Q8TEV9 937 aaPredicted RBP23.95■■□□□ 1.42
SH2D3A-201ENST00000245908 CEP63Q96MT8 703 aa23.95■■□□□ 1.42
SH2D3A-201ENST00000245908 VPS18Q9P253 973 aa23.95■■□□□ 1.42
SH2D3A-201ENST00000245908 SIPA1L1O43166 1804 aa23.94■■□□□ 1.42
SH2D3A-201ENST00000245908 PJA2O43164 708 aa23.94■■□□□ 1.42
SH2D3A-201ENST00000245908 PRLRP16471 622 aa23.94■■□□□ 1.42
SH2D3A-201ENST00000245908 MAPK8IP2Q13387 824 aaPredicted RBP23.94■■□□□ 1.42
SH2D3A-201ENST00000245908 ASTE1Q2TB18 679 aaPredicted RBP23.94■■□□□ 1.42
SH2D3A-201ENST00000245908 ZNF572Q7Z3I7 529 aaPredicted RBP23.94■■□□□ 1.42
SH2D3A-201ENST00000245908 FAM71BQ8TC56 605 aa23.94■■□□□ 1.42
SH2D3A-201ENST00000245908 TEKT1Q969V4 418 aa23.94■■□□□ 1.42
SH2D3A-201ENST00000245908 TRERF1Q96PN7 1200 aa23.94■■□□□ 1.42
SH2D3A-201ENST00000245908 MLXIPQ9HAP2 919 aa23.94■■□□□ 1.42
SH2D3A-201ENST00000245908 SSU72P8A0A1W2PR75 194 aa23.94■■□□□ 1.42
SH2D3A-201ENST00000245908 KCNMB3Q9NPA1 279 aa23.94■■□□□ 1.42
SH2D3A-201ENST00000245908 PCDHA2Q9Y5H9 948 aa23.94■■□□□ 1.42
SH2D3A-201ENST00000245908 CREG2Q8IUH2 290 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 CCDC65Q8IXS2 484 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 TANGO6Q9C0B7 1094 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 MED4Q9NPJ6 270 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 NRXN2Q9P2S2 1712 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 CYP3A7-CYP3A51PA0A087WV96 503 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 E9PMD0 336 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 TRAF5O00463 557 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 MOCS3O95396 460 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 CYP3A7P24462 503 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 USP11P51784 963 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 ITIH3Q06033 890 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 NFIAQ12857 509 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 DOK7Q18PE1 504 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 QRICH1Q2TAL8 776 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 CCDC40Q4G0X9 1142 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 CACNA2D4Q7Z3S7 1137 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 MBOAT7Q96N66 472 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 EFCC1Q9HA90 598 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 CEP72Q9P209 647 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 KIAA1024Q9UPX6 916 aa23.93■■□□□ 1.42
SH2D3A-201ENST00000245908 ATAD5Q96QE3 1844 aa23.92■■□□□ 1.42
SH2D3A-201ENST00000245908 PLA2G4BP0C869 781 aa23.92■■□□□ 1.42
SH2D3A-201ENST00000245908 MARSP56192 900 aaKnown RBP23.92■■□□□ 1.42
SH2D3A-201ENST00000245908 HGSNATQ68CP4 663 aa23.92■■□□□ 1.42
SH2D3A-201ENST00000245908 CCDC155Q8N6L0 562 aa23.92■■□□□ 1.42
SH2D3A-201ENST00000245908 FGFBP2Q9BYJ0 223 aa23.92■■□□□ 1.42
SH2D3A-201ENST00000245908 DNAJC18Q9H819 358 aa23.92■■□□□ 1.42
SH2D3A-201ENST00000245908 FAN1Q9Y2M0 1017 aa23.92■■□□□ 1.42
SH2D3A-201ENST00000245908 USP17L15C9J2P7 530 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 USP17L13C9JLJ4 530 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 USP17L11C9JVI0 530 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 USP17L18D6R9N7 530 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 USP17L22D6RA61 530 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 USP17L17D6RBQ6 530 aa23.91■■□□□ 1.42
SH2D3A-201ENST00000245908 USP17L19D6RCP7 530 aa23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms