RNA–Protein interactions for RNA: ENST00000245816.8

CLPP-201, Transcript of caseinolytic mitochondrial matrix peptidase proteolytic subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPP, Length 1,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPP-201ENST00000245816 CTCFLQ8NI51 663 aaPredicted RBP18.67■□□□□ 0.58
CLPP-201ENST00000245816 FRMPD4Q14CM0 1322 aa18.67■□□□□ 0.58
CLPP-201ENST00000245816 TRIP12Q14669 1992 aaPredicted RBP18.66■□□□□ 0.58
CLPP-201ENST00000245816 KPNA6O60684 536 aa18.66■□□□□ 0.58
CLPP-201ENST00000245816 ARHGEF15O94989 841 aa18.66■□□□□ 0.58
CLPP-201ENST00000245816 IQCF3P0C7M6 154 aa18.66■□□□□ 0.58
CLPP-201ENST00000245816 ZNF200P98182 395 aaPredicted RBP18.66■□□□□ 0.58
CLPP-201ENST00000245816 ADGRE1Q14246 886 aa18.66■□□□□ 0.58
CLPP-201ENST00000245816 TRAF7Q6Q0C0 670 aa18.66■□□□□ 0.58
CLPP-201ENST00000245816 NFXL1Q6ZNB6 911 aa18.66■□□□□ 0.58
CLPP-201ENST00000245816 DEFB128Q7Z7B8 93 aa18.66■□□□□ 0.58
CLPP-201ENST00000245816 FCHSD1Q86WN1 690 aa18.66■□□□□ 0.58
CLPP-201ENST00000245816 MAFAQ8NHW3 353 aaPredicted RBP18.66■□□□□ 0.58
CLPP-201ENST00000245816 MPHOSPH6Q99547 160 aaKnown RBP18.66■□□□□ 0.58
CLPP-201ENST00000245816 SPZ1Q9BXG8 430 aa18.66■□□□□ 0.58
CLPP-201ENST00000245816 NKX2-4Q9H2Z4 354 aa18.66■□□□□ 0.58
CLPP-201ENST00000245816 HDAC6Q9UBN7 1215 aa18.66■□□□□ 0.58
CLPP-201ENST00000245816 SLC12A7Q9Y666 1083 aa18.66■□□□□ 0.58
CLPP-201ENST00000245816 hCG_1642624A0A1W2PR95 340 aa18.65■□□□□ 0.58
CLPP-201ENST00000245816 B4DLN1 442 aa18.65■□□□□ 0.58
CLPP-201ENST00000245816 MEIS2O14770 477 aa18.65■□□□□ 0.58
CLPP-201ENST00000245816 ZNF286BP0CG31 522 aa18.65■□□□□ 0.58
CLPP-201ENST00000245816 UBA1P22314 1058 aaKnown RBP18.65■□□□□ 0.58
CLPP-201ENST00000245816 PSMA5P28066 241 aa18.65■□□□□ 0.58
CLPP-201ENST00000245816 MRPL12P52815 198 aaKnown RBP18.65■□□□□ 0.58
CLPP-201ENST00000245816 RCAN1P53805 252 aa18.65■□□□□ 0.58
CLPP-201ENST00000245816 CHMP4BP1P59074 171 aa18.65■□□□□ 0.58
CLPP-201ENST00000245816 PTPN11Q06124 597 aaPredicted RBP18.65■□□□□ 0.58
CLPP-201ENST00000245816 TRIM71Q2Q1W2 868 aaKnown RBP18.65■□□□□ 0.58
CLPP-201ENST00000245816 ADCK5Q3MIX3 580 aa18.65■□□□□ 0.58
CLPP-201ENST00000245816 USP17L6PQ6QN14 398 aa18.65■□□□□ 0.58
CLPP-201ENST00000245816 SYNE3Q6ZMZ3 975 aa18.65■□□□□ 0.58
CLPP-201ENST00000245816 SESTD1Q86VW0 696 aa18.65■□□□□ 0.58
CLPP-201ENST00000245816 USP26Q9BXU7 913 aa18.65■□□□□ 0.58
CLPP-201ENST00000245816 MRVI1Q9Y6F6 885 aa18.65■□□□□ 0.58
CLPP-201ENST00000245816 PTPRSQ13332 1948 aa18.64■□□□□ 0.58
CLPP-201ENST00000245816 GCOM1H8Y6P7 765 aaPredicted RBP18.64■□□□□ 0.57
CLPP-201ENST00000245816 SUPT20HL2P0C7V6 817 aa18.64■□□□□ 0.57
CLPP-201ENST00000245816 POLR2MP0CAP2 368 aa18.64■□□□□ 0.57
CLPP-201ENST00000245816 PSEN2P49810 448 aa18.64■□□□□ 0.57
CLPP-201ENST00000245816 CELF3Q5SZQ8 465 aaKnown RBP18.64■□□□□ 0.57
CLPP-201ENST00000245816 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.64■□□□□ 0.57
CLPP-201ENST00000245816 C16orf70Q9BSU1 422 aa18.64■□□□□ 0.57
CLPP-201ENST00000245816 PRDM12Q9H4Q4 367 aa18.64■□□□□ 0.57
CLPP-201ENST00000245816 PRDM6Q9NQX0 595 aa18.64■□□□□ 0.57
CLPP-201ENST00000245816 SNX14Q9Y5W7 946 aa18.64■□□□□ 0.57
CLPP-201ENST00000245816 TANC1Q9C0D5 1861 aa18.64■□□□□ 0.57
CLPP-201ENST00000245816 DOCK5Q9H7D0 1870 aa18.63■□□□□ 0.57
CLPP-201ENST00000245816 GGPS1O95749 300 aa18.63■□□□□ 0.57
CLPP-201ENST00000245816 F2P00734 622 aa18.63■□□□□ 0.57
CLPP-201ENST00000245816 FOSL2P15408 326 aa18.63■□□□□ 0.57
CLPP-201ENST00000245816 PTGISQ16647 500 aa18.63■□□□□ 0.57
CLPP-201ENST00000245816 SPRED2Q7Z698 418 aa18.63■□□□□ 0.57
CLPP-201ENST00000245816 FANCBQ8NB91 859 aa18.63■□□□□ 0.57
CLPP-201ENST00000245816 PPTC7Q8NI37 304 aa18.63■□□□□ 0.57
CLPP-201ENST00000245816 ALG1Q9BT22 464 aa18.63■□□□□ 0.57
CLPP-201ENST00000245816 COL25A1Q9BXS0 654 aaPredicted RBP18.63■□□□□ 0.57
CLPP-201ENST00000245816 OSBPL7Q9BZF2 842 aa18.63■□□□□ 0.57
CLPP-201ENST00000245816 GTF2IRD1Q9UHL9 959 aa18.63■□□□□ 0.57
CLPP-201ENST00000245816 MYO9BQ13459 2157 aa18.63■□□□□ 0.57
CLPP-201ENST00000245816 TRANK1O15050 2925 aa18.62■□□□□ 0.57
CLPP-201ENST00000245816 PITPNM1O00562 1244 aa18.62■□□□□ 0.57
CLPP-201ENST00000245816 CASTP20810 708 aaKnown RBP18.62■□□□□ 0.57
CLPP-201ENST00000245816 LAMC2Q13753 1193 aa18.62■□□□□ 0.57
CLPP-201ENST00000245816 MBTPS1Q14703 1052 aa18.62■□□□□ 0.57
CLPP-201ENST00000245816 MFSD10Q14728 455 aa18.62■□□□□ 0.57
CLPP-201ENST00000245816 DGKDQ16760 1214 aa18.62■□□□□ 0.57
CLPP-201ENST00000245816 BRDTQ58F21 947 aaPredicted RBP18.62■□□□□ 0.57
CLPP-201ENST00000245816 BLOC1S2Q6QNY1 142 aa18.62■□□□□ 0.57
CLPP-201ENST00000245816 DHX37Q8IY37 1157 aaKnown RBP18.62■□□□□ 0.57
CLPP-201ENST00000245816 TCEANC2Q96MN5 208 aa18.62■□□□□ 0.57
CLPP-201ENST00000245816 INPP4AQ96PE3 977 aaPredicted RBP18.62■□□□□ 0.57
CLPP-201ENST00000245816 RBM28Q9NW13 759 aaKnown RBP18.62■□□□□ 0.57
CLPP-201ENST00000245816 RTEL1Q9NZ71 1219 aa18.62■□□□□ 0.57
CLPP-201ENST00000245816 NBNO60934 754 aa18.61■□□□□ 0.57
CLPP-201ENST00000245816 ICAM3P32942 547 aa18.61■□□□□ 0.57
CLPP-201ENST00000245816 FUT2Q10981 343 aa18.61■□□□□ 0.57
CLPP-201ENST00000245816 KIAA0753Q2KHM9 967 aa18.61■□□□□ 0.57
CLPP-201ENST00000245816 APOA5Q6Q788 366 aa18.61■□□□□ 0.57
CLPP-201ENST00000245816 TMCO2Q7Z6W1 182 aaPredicted RBP18.61■□□□□ 0.57
CLPP-201ENST00000245816 RPUSD2Q8IZ73 545 aaKnown RBP18.61■□□□□ 0.57
CLPP-201ENST00000245816 RRP36Q96EU6 259 aaKnown RBP18.61■□□□□ 0.57
CLPP-201ENST00000245816 AGXT2Q9BYV1 514 aa18.61■□□□□ 0.57
CLPP-201ENST00000245816 TM6SF1Q9BZW5 370 aa18.61■□□□□ 0.57
CLPP-201ENST00000245816 BRPF3Q9ULD4 1205 aa18.61■□□□□ 0.57
CLPP-201ENST00000245816 SPATA31C2B4DYI2 1134 aa18.6■□□□□ 0.57
CLPP-201ENST00000245816 CCND2P30279 289 aa18.6■□□□□ 0.57
CLPP-201ENST00000245816 RBL2Q08999 1139 aa18.6■□□□□ 0.57
CLPP-201ENST00000245816 TYW1BQ6NUM6 668 aa18.6■□□□□ 0.57
CLPP-201ENST00000245816 TEX2Q8IWB9 1127 aa18.6■□□□□ 0.57
CLPP-201ENST00000245816 SPATA33Q96N06 139 aa18.6■□□□□ 0.57
CLPP-201ENST00000245816 JAKMIP1Q96N16 626 aaKnown RBP18.6■□□□□ 0.57
CLPP-201ENST00000245816 FAM217BQ9NTX9 383 aaPredicted RBP18.6■□□□□ 0.57
CLPP-201ENST00000245816 SLC4A7Q9Y6M7 1214 aa18.6■□□□□ 0.57
CLPP-201ENST00000245816 EPOPA6NHQ4 379 aa18.59■□□□□ 0.57
CLPP-201ENST00000245816 ZBTB43O43298 467 aa18.59■□□□□ 0.57
CLPP-201ENST00000245816 ATP9AO75110 1047 aa18.59■□□□□ 0.57
CLPP-201ENST00000245816 PPFIA4O75335 1185 aa18.59■□□□□ 0.57
CLPP-201ENST00000245816 CKBP12277 381 aa18.59■□□□□ 0.57
CLPP-201ENST00000245816 RPS6KB1P23443 525 aa18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms