RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 KRIT1O00522 736 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 CORO7P57737 925 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 ADAM9Q13443 819 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 MTMR3Q13615 1198 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 NFRKBQ6P4R8 1299 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 MSANTD4Q8NCY6 345 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 FLAD1Q8NFF5 587 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 GLG1Q92896 1179 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 MRRFQ96E11 262 aaKnown RBP10.15□□□□□ -0.78
COL21A1-201ENST00000244728 STMN4Q9H169 189 aaPredicted RBP10.15□□□□□ -0.78
COL21A1-201ENST00000244728 VIPAS39Q9H9C1 493 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 ARMCX3Q9UH62 379 aaPredicted RBP10.15□□□□□ -0.78
COL21A1-201ENST00000244728 TMEM131LA2VDJ0 1609 aa10.15□□□□□ -0.78
COL21A1-201ENST00000244728 ANKRD26Q9UPS8 1709 aa10.15□□□□□ -0.79
COL21A1-201ENST00000244728 FRMD3A2A2Y4 597 aa10.15□□□□□ -0.79
COL21A1-201ENST00000244728 CC2D2BQ6DHV5 1058 aa10.15□□□□□ -0.79
COL21A1-201ENST00000244728 FOXR1Q6PIV2 292 aa10.15□□□□□ -0.79
COL21A1-201ENST00000244728 ADAT2Q7Z6V5 191 aaKnown RBP10.15□□□□□ -0.79
COL21A1-201ENST00000244728 FAM178BQ8IXR5 827 aa10.15□□□□□ -0.79
COL21A1-201ENST00000244728 DISC1Q9NRI5 854 aa10.15□□□□□ -0.79
COL21A1-201ENST00000244728 CTTNBP2NLQ9P2B4 639 aa10.15□□□□□ -0.79
COL21A1-201ENST00000244728 CCPG1Q9ULG6 757 aa10.15□□□□□ -0.79
COL21A1-201ENST00000244728 IFT172Q9UG01 1749 aa10.15□□□□□ -0.79
COL21A1-201ENST00000244728 SALL1Q9NSC2 1324 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 LOC102724159A0A0B4J2E5 919 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 PP2D1A8MPX8 630 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 USP17L5A8MUK1 530 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 POLR2MP0CAP2 368 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 PCP11498 1178 aaKnown RBP10.14□□□□□ -0.79
COL21A1-201ENST00000244728 RXRBP28702 533 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 PWP2Q15269 919 aaKnown RBP10.14□□□□□ -0.79
COL21A1-201ENST00000244728 BANK1Q8NDB2 785 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 IFT74Q96LB3 600 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 MAP3K14Q99558 947 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 NUCKS1Q9H1E3 243 aaKnown RBP10.14□□□□□ -0.79
COL21A1-201ENST00000244728 ABCC12Q96J65 1359 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 A0A1W2PRG0 241 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 USP17L15C9J2P7 530 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 USP17L13C9JLJ4 530 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 USP17L11C9JVI0 530 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 USP17L18D6R9N7 530 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 USP17L22D6RA61 530 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 USP17L17D6RBQ6 530 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 USP17L19D6RCP7 530 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 USP17L20D6RJB6 530 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 NCK2O43639 380 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 CALUO43852 315 aaPredicted RBP10.14□□□□□ -0.79
COL21A1-201ENST00000244728 GH2P01242 217 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 XRCC5P13010 732 aaKnown RBP10.14□□□□□ -0.79
COL21A1-201ENST00000244728 USP17L24Q0WX57 530 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 SNCBQ16143 134 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 XKR9Q5GH70 373 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 USP17L6PQ6QN14 398 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 CCDC17Q96LX7 622 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 LRRC1Q9BTT6 524 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 LIMA1Q9UHB6 759 aaKnown RBP10.14□□□□□ -0.79
COL21A1-201ENST00000244728 PREX1Q8TCU6 1659 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 CLIC2O15247 247 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 PLCG1P19174 1290 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 ERVK-24P63145 666 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 GPATCH4Q5T3I0 446 aaKnown RBP10.14□□□□□ -0.79
COL21A1-201ENST00000244728 FAM102BQ5T8I3 360 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 NAA35Q5VZE5 725 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 TMTC3Q6ZXV5 915 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 SH2D3CQ8N5H7 860 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 UHMK1Q8TAS1 419 aaKnown RBP10.14□□□□□ -0.79
COL21A1-201ENST00000244728 STAG1Q8WVM7 1258 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 LARP4BQ92615 738 aaKnown RBP10.14□□□□□ -0.79
COL21A1-201ENST00000244728 TBC1D31Q96DN5 1066 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 KANSL2Q9H9L4 492 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 ODF2LQ9ULJ1 636 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 SCAF8Q9UPN6 1271 aaKnown RBP10.14□□□□□ -0.79
COL21A1-201ENST00000244728 USTQ9Y2C2 406 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 CDHR2Q9BYE9 1310 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 RPSAP08865 295 aaKnown RBP10.14□□□□□ -0.79
COL21A1-201ENST00000244728 CLTAP09496 248 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 CD19P15391 556 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 CD44P16070 742 aaKnown RBP10.14□□□□□ -0.79
COL21A1-201ENST00000244728 TNNI1P19237 187 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 PRPHP41219 470 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 IRAK1P51617 712 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 WDR44Q5JSH3 913 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 CCNI2Q6ZMN8 369 aaPredicted RBP10.14□□□□□ -0.79
COL21A1-201ENST00000244728 STAG2Q8N3U4 1231 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 CEP95Q96GE4 821 aa10.14□□□□□ -0.79
COL21A1-201ENST00000244728 DLG5Q8TDM6 1919 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 TARSL2A2RTX5 802 aaKnown RBP10.13□□□□□ -0.79
COL21A1-201ENST00000244728 SFI1A8K8P3 1242 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 DPYDQ12882 1025 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 MAN2A1Q16706 1144 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 ARHGEF16Q5VV41 709 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 U2AF1L4Q8WU68 220 aaKnown RBP10.13□□□□□ -0.79
COL21A1-201ENST00000244728 PSMD1Q99460 953 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 NDST4Q9H3R1 872 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 DLATP10515 647 aaKnown RBP10.13□□□□□ -0.79
COL21A1-201ENST00000244728 ZNF18P17022 549 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 ODR4Q5SWX8 454 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 EEPD1Q7L9B9 569 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 SPATA4Q8NEY3 305 aa10.13□□□□□ -0.79
COL21A1-201ENST00000244728 OSBPL9Q96SU4 736 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms