RNA–Protein interactions for RNA: ENST00000244303.10

HIF3A-202, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,250 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-202ENST00000244303 CDC42EP5Q6NZY7 148 aa15.96■□□□□ 0.14
HIF3A-202ENST00000244303 ZNF622Q969S3 477 aaKnown RBP eCLIP15.96■□□□□ 0.14
HIF3A-202ENST00000244303 SERPINB13Q9UIV8 391 aa15.96■□□□□ 0.14
HIF3A-202ENST00000244303 PCDHA13Q9Y5I0 950 aa15.96■□□□□ 0.14
HIF3A-202ENST00000244303 CAPN6Q9Y6Q1 641 aa15.96■□□□□ 0.14
HIF3A-202ENST00000244303 USO1O60763 962 aaKnown RBP15.95■□□□□ 0.14
HIF3A-202ENST00000244303 EIF4A3P38919 411 aaKnown RBP15.95■□□□□ 0.14
HIF3A-202ENST00000244303 PSMD2Q13200 908 aa15.95■□□□□ 0.14
HIF3A-202ENST00000244303 HHIPL2Q6UWX4 724 aa15.95■□□□□ 0.14
HIF3A-202ENST00000244303 RRAGAQ7L523 313 aa15.95■□□□□ 0.14
HIF3A-202ENST00000244303 CCDC84Q86UT8 332 aaPredicted RBP15.95■□□□□ 0.14
HIF3A-202ENST00000244303 CUL5Q93034 780 aa15.95■□□□□ 0.14
HIF3A-202ENST00000244303 CCDC102AQ96A19 550 aa15.95■□□□□ 0.14
HIF3A-202ENST00000244303 LRRC27Q9C0I9 530 aa15.95■□□□□ 0.14
HIF3A-202ENST00000244303 DEF6Q9H4E7 631 aa15.95■□□□□ 0.14
HIF3A-202ENST00000244303 SH2D4AQ9H788 454 aa15.95■□□□□ 0.14
HIF3A-202ENST00000244303 PSD3Q9NYI0 1048 aa15.95■□□□□ 0.14
HIF3A-202ENST00000244303 FAN1Q9Y2M0 1017 aa15.95■□□□□ 0.14
HIF3A-202ENST00000244303 SHMT1P34896 483 aa15.94■□□□□ 0.14
HIF3A-202ENST00000244303 LMAN1P49257 510 aa15.94■□□□□ 0.14
HIF3A-202ENST00000244303 COASYQ13057 564 aa15.94■□□□□ 0.14
HIF3A-202ENST00000244303 KCTD1Q719H9 257 aa15.94■□□□□ 0.14
HIF3A-202ENST00000244303 TRIM58Q8NG06 486 aa15.94■□□□□ 0.14
HIF3A-202ENST00000244303 DNAJC19Q96DA6 116 aa15.94■□□□□ 0.14
HIF3A-202ENST00000244303 TSG101Q99816 390 aa15.94■□□□□ 0.14
HIF3A-202ENST00000244303 MLXIPQ9HAP2 919 aa15.94■□□□□ 0.14
HIF3A-202ENST00000244303 SWAP70Q9UH65 585 aa15.94■□□□□ 0.14
HIF3A-202ENST00000244303 TARSL2A2RTX5 802 aaKnown RBP15.94■□□□□ 0.14
HIF3A-202ENST00000244303 USP17L10C9JJH3 530 aa15.94■□□□□ 0.14
HIF3A-202ENST00000244303 MARCH6O60337 910 aa15.94■□□□□ 0.14
HIF3A-202ENST00000244303 LCA5LO95447 670 aa15.94■□□□□ 0.14
HIF3A-202ENST00000244303 MCM3P25205 808 aa15.94■□□□□ 0.14
HIF3A-202ENST00000244303 APOBEC3HQ6NTF7 200 aaKnown RBP15.94■□□□□ 0.14
HIF3A-202ENST00000244303 MYOCDQ8IZQ8 938 aa15.94■□□□□ 0.14
HIF3A-202ENST00000244303 CCDC155Q8N6L0 562 aa15.94■□□□□ 0.14
HIF3A-202ENST00000244303 BAP1Q92560 729 aa15.94■□□□□ 0.14
HIF3A-202ENST00000244303 TEKT1Q969V4 418 aa15.94■□□□□ 0.14
HIF3A-202ENST00000244303 TANGO6Q9C0B7 1094 aa15.94■□□□□ 0.14
HIF3A-202ENST00000244303 KCNQ5Q9NR82 932 aa15.94■□□□□ 0.14
HIF3A-202ENST00000244303 COL11A2P13942 1736 aaPredicted RBP15.94■□□□□ 0.14
HIF3A-202ENST00000244303 TULP2O00295 520 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 MPHOSPH10O00566 681 aaKnown RBP15.93■□□□□ 0.14
HIF3A-202ENST00000244303 ZBTB5O15062 677 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 AKR1B10O60218 316 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 TACC1O75410 805 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 ZMYND10O75800 440 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 MOCS3O95396 460 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 C2orf54Q08AI8 447 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 UIMC1Q96RL1 719 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 DBNDD1Q9H9R9 158 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 SNX12Q9UMY4 172 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 PCDHA12Q9UN75 941 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 JRKLQ9Y4A0 524 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 SLURP2P0DP57 97 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 TNNT3P45378 269 aaPredicted RBP15.93■□□□□ 0.14
HIF3A-202ENST00000244303 MRPL12P52815 198 aaKnown RBP15.93■□□□□ 0.14
HIF3A-202ENST00000244303 MAP9Q49MG5 647 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 ZCWPW2Q504Y3 356 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 HSP90B2PQ58FF3 399 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 ZNF772Q68DY9 489 aaPredicted RBP15.93■□□□□ 0.14
HIF3A-202ENST00000244303 FAM71BQ8TC56 605 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 DRC1Q96MC2 740 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 ACBD3Q9H3P7 528 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 PANK4Q9NVE7 773 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 C10orf71Q711Q0 1435 aa15.93■□□□□ 0.14
HIF3A-202ENST00000244303 PHACTR2O75167 634 aa15.92■□□□□ 0.14
HIF3A-202ENST00000244303 SSBP05455 408 aaKnown RBP eCLIP15.92■□□□□ 0.14
HIF3A-202ENST00000244303 CRKP46108 304 aa15.92■□□□□ 0.14
HIF3A-202ENST00000244303 RAD51AP2Q09MP3 1159 aa15.92■□□□□ 0.14
HIF3A-202ENST00000244303 KCNMA1Q12791 1236 aa15.92■□□□□ 0.14
HIF3A-202ENST00000244303 GPATCH4Q5T3I0 446 aaKnown RBP15.92■□□□□ 0.14
HIF3A-202ENST00000244303 CACNA2D4Q7Z3S7 1137 aa15.92■□□□□ 0.14
HIF3A-202ENST00000244303 PODNQ7Z5L7 613 aa15.92■□□□□ 0.14
HIF3A-202ENST00000244303 CREG2Q8IUH2 290 aa15.92■□□□□ 0.14
HIF3A-202ENST00000244303 FGFBP2Q9BYJ0 223 aa15.92■□□□□ 0.14
HIF3A-202ENST00000244303 PSTPIP2Q9H939 334 aa15.92■□□□□ 0.14
HIF3A-202ENST00000244303 TBC1D7Q9P0N9 293 aa15.92■□□□□ 0.14
HIF3A-202ENST00000244303 ATAD5Q96QE3 1844 aa15.92■□□□□ 0.14
HIF3A-202ENST00000244303 MYO3BQ8WXR4 1341 aa15.92■□□□□ 0.14
HIF3A-202ENST00000244303 HOXA7P31268 230 aaPredicted RBP15.92■□□□□ 0.14
HIF3A-202ENST00000244303 NFIAQ12857 509 aa15.92■□□□□ 0.14
HIF3A-202ENST00000244303 FAM26FQ5R3K3 315 aa15.92■□□□□ 0.14
HIF3A-202ENST00000244303 PDXDC1Q6P996 788 aa15.92■□□□□ 0.14
HIF3A-202ENST00000244303 GSPT2Q8IYD1 628 aaKnown RBP15.92■□□□□ 0.14
HIF3A-202ENST00000244303 TSPYL1Q9H0U9 437 aa15.92■□□□□ 0.14
HIF3A-202ENST00000244303 VIPAS39Q9H9C1 493 aa15.92■□□□□ 0.14
HIF3A-202ENST00000244303 COL4A3BPQ9Y5P4 624 aa15.92■□□□□ 0.14
HIF3A-202ENST00000244303 E9PMD0 336 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 TRAF5O00463 557 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 MYBL2P10244 700 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 GCFC2P16383 781 aaKnown RBP15.91■□□□□ 0.14
HIF3A-202ENST00000244303 CAPN2P17655 700 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 FKBP3Q00688 224 aaKnown RBP15.91■□□□□ 0.14
HIF3A-202ENST00000244303 SEPT2Q15019 361 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 CCDC40Q4G0X9 1142 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 IQCEQ6IPM2 695 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 FOXR2Q6PJQ5 311 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 COG1Q8WTW3 980 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 MTMR8Q96EF0 704 aa15.91■□□□□ 0.14
HIF3A-202ENST00000244303 NT5C3AQ9H0P0 336 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms