RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 R3HDM2Q9Y2K5 976 aaKnown RBP13.95□□□□□ -0.18
VAMP4-201ENST00000236192 SYCP2Q9BX26 1530 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 HAUS5O94927 633 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 CARSP49589 748 aaKnown RBP13.95□□□□□ -0.18
VAMP4-201ENST00000236192 XRCC4Q13426 336 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 RIPK1Q13546 671 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 ZMYM1Q5SVZ6 1142 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 ANO5Q75V66 913 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 ZNF554Q86TJ5 538 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 AFAP1Q8N556 730 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 KBTBD3Q8NAB2 608 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 LSM14BQ9BX40 385 aaKnown RBP13.95□□□□□ -0.18
VAMP4-201ENST00000236192 LEMD3Q9Y2U8 911 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 COMMD3-BMI1R4GMX3 469 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 A0A1W2PP64 1363 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 EME2A4GXA9 379 aaPredicted RBP13.95□□□□□ -0.18
VAMP4-201ENST00000236192 OATP04181 439 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 C11orf91Q3C1V1 193 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 KSR2Q6VAB6 950 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 LRRC34Q8IZ02 419 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 GRK7Q8WTQ7 553 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 SYMPKQ92797 1274 aaKnown RBP13.95□□□□□ -0.18
VAMP4-201ENST00000236192 ZWILCHQ9H900 591 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 VPS37BQ9H9H4 285 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 ZC4H2Q9NQZ6 224 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 DNAAF2Q9NVR5 837 aaKnown RBP13.95□□□□□ -0.18
VAMP4-201ENST00000236192 PNMA2Q9UL42 364 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 KCNJ14Q9UNX9 436 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 SH3GLB1Q9Y371 365 aa13.95□□□□□ -0.18
VAMP4-201ENST00000236192 O00370 1275 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 FBLN1P23142 703 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 NEK2P51955 445 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 TBL3Q12788 808 aaKnown RBP13.94□□□□□ -0.18
VAMP4-201ENST00000236192 TFCP2Q12800 502 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 TEKT1Q969V4 418 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 FERMT1Q9BQL6 677 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 SEC63Q9UGP8 760 aaKnown RBP13.94□□□□□ -0.18
VAMP4-201ENST00000236192 TACC3Q9Y6A5 838 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 NCK2O43639 380 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 STRNO43815 780 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 PSMC1P62191 440 aaKnown RBP13.94□□□□□ -0.18
VAMP4-201ENST00000236192 PRR16Q569H4 304 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 TTMPQ5BVD1 217 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 KIAA2013Q8IYS2 634 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 FAM133AQ8N9E0 248 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 MPP4Q96JB8 637 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 FAM129AQ9BZQ8 928 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.94□□□□□ -0.18
VAMP4-201ENST00000236192 MED14O60244 1454 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 TRAPPC3O43617 180 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 MAN1A2O60476 641 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 PALMO75781 387 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 NLRP6P59044 892 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 PPARAQ07869 468 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 C1orf146Q5VVC0 180 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 OR2W6PQ8NHA6 318 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 DTX3LQ8TDB6 740 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 TTC1Q99614 292 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 CNGB3Q9NQW8 809 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 WDR37Q9Y2I8 494 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 LGALS16A8MUM7 142 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 LSM1O15116 133 aaKnown RBP13.94□□□□□ -0.18
VAMP4-201ENST00000236192 P4HA2O15460 535 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 PRPF6O94906 941 aaKnown RBP13.94□□□□□ -0.18
VAMP4-201ENST00000236192 DSG1Q02413 1049 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 MTA1Q13330 715 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 SPARCL1Q14515 664 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 KRT80Q6KB66 452 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 USP44Q9H0E7 712 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 TRIM10Q9UDY6 481 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.94□□□□□ -0.18
VAMP4-201ENST00000236192 SLC4A4Q9Y6R1 1079 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 ATP10AO60312 1499 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 PLB1Q6P1J6 1458 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 ADGBQ8N7X0 1667 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 NPTXRO95502 500 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 CALM1P0DP23 149 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 CALM2P0DP24 149 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 CALM3P0DP25 149 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 ADCY1Q08828 1119 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 LRRC14Q15048 493 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 C10orf76Q5T2E6 689 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 BBOF1Q8ND07 529 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.94□□□□□ -0.18
VAMP4-201ENST00000236192 LZTS1Q9Y250 596 aa13.94□□□□□ -0.18
VAMP4-201ENST00000236192 ALDH5A1P51649 535 aaPredicted RBP13.93□□□□□ -0.18
VAMP4-201ENST00000236192 CBX3Q13185 183 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 RBM12Q9NTZ6 932 aaKnown RBP13.93□□□□□ -0.18
VAMP4-201ENST00000236192 TTC26A0AVF1 554 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 UBOX5O94941 541 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 CYP21A2P08686 494 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 KRT10P13645 584 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 SERPINB8P50452 374 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 PTPROQ16827 1216 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 FAM161BQ96MY7 647 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 ZCWPW1Q9H0M4 648 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 RAD21O60216 631 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 CCDC22O60826 627 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 ZCCHC18P0CG32 403 aa13.93□□□□□ -0.18
VAMP4-201ENST00000236192 PYGBP11216 843 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms