RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 CCDC186Q7Z3E2 898 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 KCNK18Q7Z418 384 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 GIMAP8Q8ND71 665 aaPredicted RBP16.66■□□□□ 0.26
CCDC47-201ENST00000225726 TRERF1Q96PN7 1200 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 GLTPD2A6NH11 291 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 MYMKA6NI61 221 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 UBXN2AP68543 259 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 DHX8Q14562 1220 aaKnown RBP16.66■□□□□ 0.26
CCDC47-201ENST00000225726 ADSSL1Q8N142 457 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 COL20A1Q9P218 1284 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 NRBP1Q9UHY1 535 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 FRMPD4Q14CM0 1322 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 PTPRFP10586 1907 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 PVALEFA0A1B0GWK0 134 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 PTGS1P23219 599 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 NF2P35240 595 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 PRCPP42785 496 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 UBASH3AP57075 661 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 STIM1Q13586 685 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 ILDR2Q71H61 639 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 SLC5A5Q92911 643 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 CDCA5Q96FF9 252 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 HOMER2Q9NSB8 354 aa16.66■□□□□ 0.26
CCDC47-201ENST00000225726 GRIN3BO60391 1043 aa16.65■□□□□ 0.26
CCDC47-201ENST00000225726 STX17P56962 302 aa16.65■□□□□ 0.26
CCDC47-201ENST00000225726 SYTL5Q8TDW5 730 aaPredicted RBP16.65■□□□□ 0.26
CCDC47-201ENST00000225726 NELFBQ8WX92 580 aa16.65■□□□□ 0.26
CCDC47-201ENST00000225726 WNK4Q96J92 1243 aa16.65■□□□□ 0.26
CCDC47-201ENST00000225726 ZNF830Q96NB3 372 aaPredicted RBP16.65■□□□□ 0.26
CCDC47-201ENST00000225726 IMPACTQ9P2X3 320 aa16.65■□□□□ 0.26
CCDC47-201ENST00000225726 MEIS1O00470 390 aa16.65■□□□□ 0.26
CCDC47-201ENST00000225726 HOXA7P31268 230 aaPredicted RBP16.65■□□□□ 0.26
CCDC47-201ENST00000225726 PDE4DQ08499 809 aa16.65■□□□□ 0.26
CCDC47-201ENST00000225726 UNC13DQ70J99 1090 aa16.65■□□□□ 0.26
CCDC47-201ENST00000225726 KIAA1024Q9UPX6 916 aa16.65■□□□□ 0.26
CCDC47-201ENST00000225726 LOC285556D6RIA3 1793 aa16.65■□□□□ 0.26
CCDC47-201ENST00000225726 POTEB3A0JP26 581 aa16.65■□□□□ 0.26
CCDC47-201ENST00000225726 POTECB2RU33 542 aa16.65■□□□□ 0.26
CCDC47-201ENST00000225726 ATP2A1O14983 1001 aa16.65■□□□□ 0.26
CCDC47-201ENST00000225726 MED24O75448 989 aa16.65■□□□□ 0.26
CCDC47-201ENST00000225726 CDK11BP21127 795 aaKnown RBP16.65■□□□□ 0.26
CCDC47-201ENST00000225726 PPP1R2P41236 205 aa16.65■□□□□ 0.26
CCDC47-201ENST00000225726 POTEBQ6S5H4 581 aa16.65■□□□□ 0.26
CCDC47-201ENST00000225726 NIPA1Q7RTP0 329 aa16.65■□□□□ 0.26
CCDC47-201ENST00000225726 MXRA8Q9BRK3 442 aa16.65■□□□□ 0.26
CCDC47-201ENST00000225726 KCNF1Q9H3M0 494 aa16.65■□□□□ 0.26
CCDC47-201ENST00000225726 SAMSN1Q9NSI8 373 aaKnown RBP16.65■□□□□ 0.26
CCDC47-201ENST00000225726 RPA1P27694 616 aa16.64■□□□□ 0.25
CCDC47-201ENST00000225726 CCDC144BQ3MJ40 725 aa16.64■□□□□ 0.25
CCDC47-201ENST00000225726 COBLL1Q53SF7 1204 aa16.64■□□□□ 0.25
CCDC47-201ENST00000225726 CDKAL1Q5VV42 579 aa16.64■□□□□ 0.25
CCDC47-201ENST00000225726 RNF146Q9NTX7 359 aa16.64■□□□□ 0.25
CCDC47-201ENST00000225726 HOXC10Q9NYD6 342 aa16.64■□□□□ 0.25
CCDC47-201ENST00000225726 PSMD10O75832 226 aa16.64■□□□□ 0.25
CCDC47-201ENST00000225726 TKFCQ3LXA3 575 aa16.64■□□□□ 0.25
CCDC47-201ENST00000225726 POLR3CQ9BUI4 534 aaPredicted RBP16.64■□□□□ 0.25
CCDC47-201ENST00000225726 ZNF500O60304 480 aaPredicted RBP16.64■□□□□ 0.25
CCDC47-201ENST00000225726 BCRP11274 1271 aa16.64■□□□□ 0.25
CCDC47-201ENST00000225726 CLCN1P35523 988 aa16.64■□□□□ 0.25
CCDC47-201ENST00000225726 PPP2R5CQ13362 524 aa16.64■□□□□ 0.25
CCDC47-201ENST00000225726 TPD52L1Q16890 204 aaPredicted RBP16.64■□□□□ 0.25
CCDC47-201ENST00000225726 LRCH2Q5VUJ6 765 aa16.64■□□□□ 0.25
CCDC47-201ENST00000225726 PCNX4Q63HM2 1172 aa16.64■□□□□ 0.25
CCDC47-201ENST00000225726 IQCA1LA6NCM1 817 aa16.63■□□□□ 0.25
CCDC47-201ENST00000225726 RPS6P62753 249 aaKnown RBP16.63■□□□□ 0.25
CCDC47-201ENST00000225726 SNRNP48Q6IEG0 339 aaKnown RBP16.63■□□□□ 0.25
CCDC47-201ENST00000225726 RNF207Q6ZRF8 634 aa16.63■□□□□ 0.25
CCDC47-201ENST00000225726 CATSPER3Q86XQ3 398 aa16.63■□□□□ 0.25
CCDC47-201ENST00000225726 KCTD17Q8N5Z5 321 aa16.63■□□□□ 0.25
CCDC47-201ENST00000225726 MAF1Q9H063 256 aa16.63■□□□□ 0.25
CCDC47-201ENST00000225726 VGLL3A8MV65 326 aa16.63■□□□□ 0.25
CCDC47-201ENST00000225726 PLA2G4BP0C869 781 aa16.63■□□□□ 0.25
CCDC47-201ENST00000225726 SLC30A10Q6XR72 485 aa16.63■□□□□ 0.25
CCDC47-201ENST00000225726 ANKRD13AQ8IZ07 590 aa16.63■□□□□ 0.25
CCDC47-201ENST00000225726 DDX12PQ92771 950 aa16.63■□□□□ 0.25
CCDC47-201ENST00000225726 DHTKD1Q96HY7 919 aaPredicted RBP16.63■□□□□ 0.25
CCDC47-201ENST00000225726 ZNF577Q9BSK1 485 aa16.63■□□□□ 0.25
CCDC47-201ENST00000225726 TAF1DQ9H5J8 278 aaPredicted RBP16.63■□□□□ 0.25
CCDC47-201ENST00000225726 ZNF214Q9UL59 606 aaPredicted RBP16.63■□□□□ 0.25
CCDC47-201ENST00000225726 E9PMD0 336 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 PSMA7O14818 248 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 SPATA31C1P0DKV0 1188 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 PPATQ06203 517 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 OTOP1Q7RTM1 612 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 SPDYE16A6NNV3 312 aaPredicted RBP16.62■□□□□ 0.25
CCDC47-201ENST00000225726 GSDMDP57764 484 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 TMEM132BQ14DG7 1078 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 TMC6Q7Z403 805 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 WDR11Q9BZH6 1224 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 RIPK3Q9Y572 518 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 POTEFA5A3E0 1075 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 GAS7O60861 476 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 POTEIP0CG38 1075 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 ARP10275 920 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 HSP90AA4PQ58FG1 418 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 POTEGQ6S5H5 508 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 POTEEQ6S8J3 1075 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 DYMQ7RTS9 669 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 ERO1BQ86YB8 467 aa16.62■□□□□ 0.25
CCDC47-201ENST00000225726 TAAR1Q96RJ0 339 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms