RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 FBXO2Q9UK22 296 aaPredicted RBP15.91■□□□□ 0.14
SEC61B-201ENST00000223641 GABRQQ9UN88 632 aa15.91■□□□□ 0.14
SEC61B-201ENST00000223641 MSH4O15457 936 aa15.9■□□□□ 0.14
SEC61B-201ENST00000223641 SNAI1O95863 264 aaPredicted RBP15.9■□□□□ 0.14
SEC61B-201ENST00000223641 OR52Z1P0C646 297 aa15.9■□□□□ 0.14
SEC61B-201ENST00000223641 ARP10275 920 aa15.9■□□□□ 0.14
SEC61B-201ENST00000223641 FLT3LGP49771 235 aa15.9■□□□□ 0.14
SEC61B-201ENST00000223641 SEMA3FQ13275 785 aa15.9■□□□□ 0.14
SEC61B-201ENST00000223641 IL17AQ16552 155 aa15.9■□□□□ 0.14
SEC61B-201ENST00000223641 CALCRLQ16602 461 aa15.9■□□□□ 0.14
SEC61B-201ENST00000223641 CSPP1Q1MSJ5 1256 aa15.9■□□□□ 0.14
SEC61B-201ENST00000223641 AXDND1Q5T1B0 1012 aaPredicted RBP15.9■□□□□ 0.14
SEC61B-201ENST00000223641 ARMCX2Q7L311 632 aa15.9■□□□□ 0.14
SEC61B-201ENST00000223641 NLRX1Q86UT6 975 aa15.9■□□□□ 0.14
SEC61B-201ENST00000223641 SLFN12Q8IYM2 578 aa15.9■□□□□ 0.14
SEC61B-201ENST00000223641 FERMT2Q96AC1 680 aa15.9■□□□□ 0.14
SEC61B-201ENST00000223641 FLRT1Q9NZU1 646 aa15.9■□□□□ 0.14
SEC61B-201ENST00000223641 SRRDQ9UH36 339 aa15.9■□□□□ 0.14
SEC61B-201ENST00000223641 PCDHA7Q9UN72 937 aa15.9■□□□□ 0.14
SEC61B-201ENST00000223641 RBM47A0AV96 593 aaKnown RBP15.89■□□□□ 0.13
SEC61B-201ENST00000223641 SPATA31C2B4DYI2 1134 aa15.89■□□□□ 0.13
SEC61B-201ENST00000223641 ECM2O94769 699 aaPredicted RBP15.89■□□□□ 0.13
SEC61B-201ENST00000223641 CYP2B6P20813 491 aa15.89■□□□□ 0.13
SEC61B-201ENST00000223641 HOXD10P28358 340 aa15.89■□□□□ 0.13
SEC61B-201ENST00000223641 MARCKSP29966 332 aaPredicted RBP15.89■□□□□ 0.13
SEC61B-201ENST00000223641 MCM4P33991 863 aa15.89■□□□□ 0.13
SEC61B-201ENST00000223641 PRKCZQ05513 592 aa15.89■□□□□ 0.13
SEC61B-201ENST00000223641 MTMR1Q13613 665 aa15.89■□□□□ 0.13
SEC61B-201ENST00000223641 GNPTABQ3T906 1256 aa15.89■□□□□ 0.13
SEC61B-201ENST00000223641 SLC5A5Q92911 643 aa15.89■□□□□ 0.13
SEC61B-201ENST00000223641 CDHR1Q96JP9 859 aa15.89■□□□□ 0.13
SEC61B-201ENST00000223641 AGO4Q9HCK5 861 aaKnown RBP15.89■□□□□ 0.13
SEC61B-201ENST00000223641 DHX15O43143 795 aaKnown RBP15.88■□□□□ 0.13
SEC61B-201ENST00000223641 CUTAO60888 179 aa15.88■□□□□ 0.13
SEC61B-201ENST00000223641 PSMD10O75832 226 aa15.88■□□□□ 0.13
SEC61B-201ENST00000223641 TGFB3P10600 412 aa15.88■□□□□ 0.13
SEC61B-201ENST00000223641 FXR2P51116 673 aaKnown RBP eCLIP15.88■□□□□ 0.13
SEC61B-201ENST00000223641 GRIN1Q05586 938 aa15.88■□□□□ 0.13
SEC61B-201ENST00000223641 PDIA5Q14554 519 aa15.88■□□□□ 0.13
SEC61B-201ENST00000223641 ARHGEF6Q15052 776 aa15.88■□□□□ 0.13
SEC61B-201ENST00000223641 CCL14Q16627 93 aa15.88■□□□□ 0.13
SEC61B-201ENST00000223641 ADALQ6DHV7 355 aa15.88■□□□□ 0.13
SEC61B-201ENST00000223641 TAPT1Q6NXT6 567 aa15.88■□□□□ 0.13
SEC61B-201ENST00000223641 B3GNT9Q6UX72 402 aa15.88■□□□□ 0.13
SEC61B-201ENST00000223641 DTHD1Q6ZMT9 781 aa15.88■□□□□ 0.13
SEC61B-201ENST00000223641 IGSF22Q8N9C0 903 aa15.88■□□□□ 0.13
SEC61B-201ENST00000223641 KRI1Q8N9T8 703 aaKnown RBP15.88■□□□□ 0.13
SEC61B-201ENST00000223641 ZNF579Q8NAF0 562 aaKnown RBP15.88■□□□□ 0.13
SEC61B-201ENST00000223641 RIT2Q99578 217 aa15.88■□□□□ 0.13
SEC61B-201ENST00000223641 SENP7Q9BQF6 1050 aa15.88■□□□□ 0.13
SEC61B-201ENST00000223641 ABHD16BQ9H3Z7 469 aa15.88■□□□□ 0.13
SEC61B-201ENST00000223641 VTA1Q9NP79 307 aa15.88■□□□□ 0.13
SEC61B-201ENST00000223641 LMBRD1Q9NUN5 540 aa15.88■□□□□ 0.13
SEC61B-201ENST00000223641 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.88■□□□□ 0.13
SEC61B-201ENST00000223641 TSKSQ9UJT2 592 aa15.88■□□□□ 0.13
SEC61B-201ENST00000223641 IPO5O00410 1097 aaKnown RBP15.87■□□□□ 0.13
SEC61B-201ENST00000223641 ATP9AO75110 1047 aa15.87■□□□□ 0.13
SEC61B-201ENST00000223641 KCNA2P16389 499 aa15.87■□□□□ 0.13
SEC61B-201ENST00000223641 PRMT2P55345 433 aa15.87■□□□□ 0.13
SEC61B-201ENST00000223641 SPIRE1Q08AE8 756 aa15.87■□□□□ 0.13
SEC61B-201ENST00000223641 CCDC62Q6P9F0 684 aa15.87■□□□□ 0.13
SEC61B-201ENST00000223641 KCNV1Q6PIU1 500 aa15.87■□□□□ 0.13
SEC61B-201ENST00000223641 TRMT44Q8IYL2 757 aaKnown RBP15.87■□□□□ 0.13
SEC61B-201ENST00000223641 TTC12Q9H892 705 aaPredicted RBP15.87■□□□□ 0.13
SEC61B-201ENST00000223641 PCDHA12Q9UN75 941 aa15.87■□□□□ 0.13
SEC61B-201ENST00000223641 A0A1W2PQ27 194 aa15.86■□□□□ 0.13
SEC61B-201ENST00000223641 A0A1W2PQ64 194 aa15.86■□□□□ 0.13
SEC61B-201ENST00000223641 A0A1W2PQD8 194 aa15.86■□□□□ 0.13
SEC61B-201ENST00000223641 GOLGA6L22H0YM25 854 aa15.86■□□□□ 0.13
SEC61B-201ENST00000223641 PRPF40AO75400 957 aaKnown RBP15.86■□□□□ 0.13
SEC61B-201ENST00000223641 LONP1P36776 959 aaKnown RBP15.86■□□□□ 0.13
SEC61B-201ENST00000223641 TXKP42681 527 aa15.86■□□□□ 0.13
SEC61B-201ENST00000223641 ME1P48163 572 aa15.86■□□□□ 0.13
SEC61B-201ENST00000223641 ITGB3BPQ13352 177 aaPredicted RBP15.86■□□□□ 0.13
SEC61B-201ENST00000223641 OTOP1Q7RTM1 612 aa15.86■□□□□ 0.13
SEC61B-201ENST00000223641 GJA10Q969M2 543 aa15.86■□□□□ 0.13
SEC61B-201ENST00000223641 AK8Q96MA6 479 aa15.86■□□□□ 0.13
SEC61B-201ENST00000223641 CLIC6Q96NY7 704 aa15.86■□□□□ 0.13
SEC61B-201ENST00000223641 ZNF577Q9BSK1 485 aa15.86■□□□□ 0.13
SEC61B-201ENST00000223641 TBC1D22BQ9NU19 505 aa15.86■□□□□ 0.13
SEC61B-201ENST00000223641 DDX41Q9UJV9 622 aaKnown RBP15.86■□□□□ 0.13
SEC61B-201ENST00000223641 VAV3Q9UKW4 847 aa15.86■□□□□ 0.13
SEC61B-201ENST00000223641 NFASCO94856 1347 aa15.86■□□□□ 0.13
SEC61B-201ENST00000223641 DOCK5Q9H7D0 1870 aa15.85■□□□□ 0.13
SEC61B-201ENST00000223641 FAM237AA0A1B0GTK4 181 aa15.85■□□□□ 0.13
SEC61B-201ENST00000223641 VWA3AA6NCI4 1184 aa15.85■□□□□ 0.13
SEC61B-201ENST00000223641 GADD45BO75293 160 aaPredicted RBP15.85■□□□□ 0.13
SEC61B-201ENST00000223641 UBE2HP62256 183 aa15.85■□□□□ 0.13
SEC61B-201ENST00000223641 SP2Q02086 613 aa15.85■□□□□ 0.13
SEC61B-201ENST00000223641 PPP2R5CQ13362 524 aa15.85■□□□□ 0.13
SEC61B-201ENST00000223641 ACVR2BQ13705 512 aa15.85■□□□□ 0.13
SEC61B-201ENST00000223641 LRCH2Q5VUJ6 765 aa15.85■□□□□ 0.13
SEC61B-201ENST00000223641 SHC4Q6S5L8 630 aa15.85■□□□□ 0.13
SEC61B-201ENST00000223641 SEPT14Q6ZU15 432 aa15.85■□□□□ 0.13
SEC61B-201ENST00000223641 EEPD1Q7L9B9 569 aa15.85■□□□□ 0.13
SEC61B-201ENST00000223641 FBXO16Q8IX29 292 aaPredicted RBP15.85■□□□□ 0.13
SEC61B-201ENST00000223641 PXYLP1Q8TE99 480 aa15.85■□□□□ 0.13
SEC61B-201ENST00000223641 SCFD2Q8WU76 684 aa15.85■□□□□ 0.13
SEC61B-201ENST00000223641 TRIB2Q92519 343 aa15.85■□□□□ 0.13
SEC61B-201ENST00000223641 CSRNP2Q9H175 543 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms