RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 TMC4Q7Z404 712 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 PNKPQ96T60 521 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 KRT12Q99456 494 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 ANO3Q9BYT9 981 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 BHMT2Q9H2M3 363 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 NPHP3-ACAD11A0A0J9YXS1 232 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 ARHGEF35A5YM69 484 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 ZBTB5O15062 677 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 GAS7O60861 476 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 GNA14O95837 355 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 SRGNP10124 158 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 PRPHP41219 470 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 LRRC63Q05C16 580 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 SEPT2Q15019 361 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 IL17AQ16552 155 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 NAA35Q5VZE5 725 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 FAM71BQ8TC56 605 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 RAD54LQ92698 747 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 CCDC17Q96LX7 622 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 APBA3O96018 575 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 ABL1P00519 1130 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 CCDC172P0C7W6 258 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 SF3A3Q12874 501 aaKnown RBP eCLIP10.74□□□□□ -0.69
CSTF1-201ENST00000217109 COASYQ13057 564 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 SH3RF1Q7Z6J0 888 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 SLFN12Q8IYM2 578 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 IQCDQ96DY2 449 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 NUCKS1Q9H1E3 243 aaKnown RBP10.74□□□□□ -0.69
CSTF1-201ENST00000217109 SWAP70Q9UH65 585 aa10.74□□□□□ -0.69
CSTF1-201ENST00000217109 SLC37A4O43826 429 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 TNFAIP3P21580 790 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 QRICH1Q2TAL8 776 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 C16orf86Q6ZW13 317 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 MICALL1Q8N3F8 863 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 PIGOQ8TEQ8 1089 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 BICD1Q96G01 975 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 CSRNP1Q96S65 589 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 COA1Q9GZY4 146 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 LACRTQ9GZZ8 138 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 ARHGEF10LQ9HCE6 1279 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 SMARCAL1Q9NZC9 954 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 PVALEFA0A1B0GWK0 134 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 EEF2P13639 858 aaKnown RBP10.73□□□□□ -0.69
CSTF1-201ENST00000217109 E2F4Q16254 413 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 RC3H1Q5TC82 1133 aaKnown RBP10.73□□□□□ -0.69
CSTF1-201ENST00000217109 DAAM2Q86T65 1068 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.73□□□□□ -0.69
CSTF1-201ENST00000217109 EPB41L5Q9HCM4 733 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 MED4Q9NPJ6 270 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 HDAC9Q9UKV0 1011 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 PACSIN2Q9UNF0 486 aaPredicted RBP10.73□□□□□ -0.69
CSTF1-201ENST00000217109 ATRNO75882 1429 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 GOLGA6L10A0A0M3HER8 536 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 NDUFAB1O14561 156 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 PPIP5K2O43314 1243 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 N4BP1O75113 896 aaKnown RBP10.73□□□□□ -0.69
CSTF1-201ENST00000217109 GCFC2P16383 781 aaKnown RBP10.73□□□□□ -0.69
CSTF1-201ENST00000217109 TRAF1Q13077 416 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 GUF1Q8N442 669 aaKnown RBP10.73□□□□□ -0.69
CSTF1-201ENST00000217109 KBTBD4Q9NVX7 518 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 RABGAP1Q9Y3P9 1069 aa10.73□□□□□ -0.69
CSTF1-201ENST00000217109 FAM83BQ5T0W9 1011 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 TTI2Q6NXR4 508 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 BARGINQ6ZT62 677 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 FAM178BQ8IXR5 827 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 RIN2Q8WYP3 895 aaPredicted RBP10.72□□□□□ -0.69
CSTF1-201ENST00000217109 MED15Q96RN5 788 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 QTRT2Q9H974 415 aaKnown RBP10.72□□□□□ -0.69
CSTF1-201ENST00000217109 GPR75-ASB3A0A0A6YYF3 556 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 EIF3CLB5ME19 914 aaKnown RBP10.72□□□□□ -0.69
CSTF1-201ENST00000217109 RNF225M0QZC1 329 aaPredicted RBP10.72□□□□□ -0.69
CSTF1-201ENST00000217109 ADAMTS3O15072 1205 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 GH2P01242 217 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 STAT1P42224 750 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 PAK2Q13177 524 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 TMEM139Q8IV31 216 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 ZNF384Q8TF68 577 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 DYDC1Q8WWB3 177 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 EIF3CQ99613 913 aaKnown RBP10.72□□□□□ -0.69
CSTF1-201ENST00000217109 PI4KBQ9UBF8 816 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 PLEKHG2Q9H7P9 1386 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 CNTNAP4Q9C0A0 1308 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 ESYT3A0FGR9 886 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 CCDC169A6NNP5 214 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 MMP10P09238 476 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 MYCLP12524 364 aaPredicted RBP10.72□□□□□ -0.69
CSTF1-201ENST00000217109 PPP4CP60510 307 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 CTTNQ14247 550 aaKnown RBP10.72□□□□□ -0.69
CSTF1-201ENST00000217109 GBP6Q6ZN66 633 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 SLC51AQ86UW1 340 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 CCDC25Q86WR0 208 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 EXOC4Q96A65 974 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 MTRQ99707 1265 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 C7orf25Q9BPX7 421 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 TDRD3Q9H7E2 651 aaKnown RBP10.72□□□□□ -0.69
CSTF1-201ENST00000217109 GSTTP1A0A1W2PQM5 241 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 hCG_1984214I3L0E3 225 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 HEXIM1O94992 359 aaKnown RBP10.72□□□□□ -0.69
CSTF1-201ENST00000217109 ACTN2P35609 894 aa10.72□□□□□ -0.69
CSTF1-201ENST00000217109 PDE6BP35913 854 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms