RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 VTI1AQ96AJ9 217 aa9.91□□□□□ -0.82
MTHFD1-201ENST00000216605 VPS16Q9H269 839 aa9.91□□□□□ -0.82
MTHFD1-201ENST00000216605 DEF6Q9H4E7 631 aa9.91□□□□□ -0.82
MTHFD1-201ENST00000216605 VCPKMTQ9H867 229 aa9.91□□□□□ -0.82
MTHFD1-201ENST00000216605 HOMER2Q9NSB8 354 aa9.91□□□□□ -0.82
MTHFD1-201ENST00000216605 BMP2KQ9NSY1 1161 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-201ENST00000216605 HACL1Q9UJ83 578 aa9.91□□□□□ -0.82
MTHFD1-201ENST00000216605 CNTNAP1P78357 1384 aa9.91□□□□□ -0.82
MTHFD1-201ENST00000216605 H2AFXP16104 143 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-201ENST00000216605 ERCC6LQ2NKX8 1250 aa9.91□□□□□ -0.82
MTHFD1-201ENST00000216605 KIF4BQ2VIQ3 1234 aa9.91□□□□□ -0.82
MTHFD1-201ENST00000216605 PPFIBP1Q86W92 1011 aa9.91□□□□□ -0.82
MTHFD1-201ENST00000216605 NLGN2Q8NFZ4 835 aa9.91□□□□□ -0.82
MTHFD1-201ENST00000216605 SPATA20Q8TB22 786 aa9.91□□□□□ -0.82
MTHFD1-201ENST00000216605 JRKLQ9Y4A0 524 aa9.91□□□□□ -0.82
MTHFD1-201ENST00000216605 ASTN2O75129 1339 aaPredicted RBP9.91□□□□□ -0.82
MTHFD1-201ENST00000216605 FOCADQ5VW36 1801 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 TPM1P09493 284 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 ORC2Q13416 577 aaPredicted RBP9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 NAALADL2Q58DX5 795 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 ZC3H12AQ5D1E8 599 aaKnown RBP9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 FKBP1CQ5VVH2 108 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 PPP4R3AQ6IN85 833 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 LARP4BQ92615 738 aaKnown RBP9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 DEFB129Q9H1M3 183 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 CUEDC2Q9H467 287 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 SLC39A2Q9NP94 309 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 CD2APQ9Y5K6 639 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 QSER1Q2KHR3 1735 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 TRIM49BA6NDI0 452 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 PPP1R3GB7ZBB8 358 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 FOSP01100 380 aaPredicted RBP9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 KCNJ6P48051 423 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 HNRNPH2P55795 449 aaKnown RBP9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 AP3B2Q13367 1082 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 KIAA1755Q5JYT7 1200 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 TMCO3Q6UWJ1 677 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 UBXN4Q92575 508 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 MTMR8Q96EF0 704 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 PCMTD1Q96MG8 357 aaPredicted RBP9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 MTMR9Q96QG7 549 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 HSD3B7Q9H2F3 369 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 KIAA1024Q9UPX6 916 aa9.9□□□□□ -0.82
MTHFD1-201ENST00000216605 GCOM1H8Y6P7 765 aaPredicted RBP9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 POLR2MP0CAP2 368 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 RPS12P25398 132 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 CYP2C19P33261 490 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 STAT3P40763 770 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 SYT10Q6XYQ8 523 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 HPS3Q969F9 1004 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 CTAGE1Q96RT6 745 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 NUDT12Q9BQG2 462 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 TAB2Q9NYJ8 693 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 CCPG1Q9ULG6 757 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 MEIS2O14770 477 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 CHMP2AO43633 222 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 FLOT1O75955 427 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 FXR2P51116 673 aaKnown RBP eCLIP9.89□□□□□ -0.831e-6■■■■□ 24.1
MTHFD1-201ENST00000216605 USP11P51784 963 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 ADKP55263 362 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 NBPF12Q5TAG4 269 aaPredicted RBP9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 ANGEL2Q5VTE6 544 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 IGSF22Q8N9C0 903 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 MTMR14Q8NCE2 650 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 ZC3H15Q8WU90 426 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 TBC1D5Q92609 795 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 SRRTQ9BXP5 876 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 TRIM9Q9C026 710 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 KBTBD4Q9NVX7 518 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 ZNF446Q9NWS9 450 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 FZD1Q9UP38 647 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 MRPL11Q9Y3B7 192 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP9.89□□□□□ -0.834e-7■□□□□ 8.7
MTHFD1-201ENST00000216605 COL4A5P29400 1685 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 ANKRD62A6NC57 917 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 H0YHG0 523 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 ALAS1P13196 640 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 CLK2P49760 499 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 SARNPP82979 210 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 GRB10Q13322 594 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 PDIA5Q14554 519 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 PPP2R5AQ15172 486 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 ARHGAP29Q52LW3 1261 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 SWT1Q5T5J6 900 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 E4F1Q66K89 784 aaPredicted RBP9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 SPECC1LQ69YQ0 1117 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 CNNM4Q6P4Q7 775 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 FAM160B2Q86V87 743 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 VSTM4Q8IW00 320 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 SLFN12Q8IYM2 578 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 ERMNQ8TAM6 284 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 PPP1R13BQ96KQ4 1090 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 DRC1Q96MC2 740 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 MMTAG2Q9BU76 263 aaKnown RBP9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 EHMT1Q9H9B1 1298 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 MAGEF1Q9HAY2 307 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 PICK1Q9NRD5 415 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 PKD2L1Q9P0L9 805 aa9.89□□□□□ -0.83
MTHFD1-201ENST00000216605 TBC1D7Q9P0N9 293 aa9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms