RNA–Protein interactions for RNA: ENST00000204961.4

EFNB1-201, Transcript of ephrin B1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EFNB1, Length 3,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNB1-201ENST00000204961 ITIH6Q6UXX5 1313 aa16.68■□□□□ 0.26
EFNB1-201ENST00000204961 ZBTB39O15060 712 aa16.68■□□□□ 0.26
EFNB1-201ENST00000204961 KIAA0753Q2KHM9 967 aa16.68■□□□□ 0.26
EFNB1-201ENST00000204961 MSANTD4Q8NCY6 345 aa16.68■□□□□ 0.26
EFNB1-201ENST00000204961 DHTKD1Q96HY7 919 aaPredicted RBP16.68■□□□□ 0.26
EFNB1-201ENST00000204961 CCSER1Q9C0I3 900 aa16.68■□□□□ 0.26
EFNB1-201ENST00000204961 ZMYND12Q9H0C1 365 aa16.68■□□□□ 0.26
EFNB1-201ENST00000204961 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.68■□□□□ 0.26
EFNB1-201ENST00000204961 GOLGA6CA6NDK9 693 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 GOLGA6DP0CG33 693 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 MAP9Q49MG5 647 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 SBK1Q52WX2 424 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 PRR5LQ6MZQ0 368 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 CCDC70Q6NSX1 233 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 PIGOQ8TEQ8 1089 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 ARL8AQ96BM9 186 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 GBP3Q9H0R5 595 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 EPB41L5Q9HCM4 733 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 GOLGA6AQ9NYA3 693 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 DDX39AO00148 427 aaKnown RBP16.67■□□□□ 0.26
EFNB1-201ENST00000204961 PALMO75781 387 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 COPB2P35606 906 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 PAFAH1B1P43034 410 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 VAV2P52735 878 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 KCNA1Q09470 495 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 GRAPQ13588 217 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 GRAPLQ8TC17 118 aaPredicted RBP16.67■□□□□ 0.26
EFNB1-201ENST00000204961 SPAG5Q96R06 1193 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 PSTPIP2Q9H939 334 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 HPCAL4Q9UM19 191 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 SMIM23A6NLE4 172 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 RSPH10B2B2RC85 870 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 FGRP09769 529 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 RSPH10BP0C881 870 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 C8orf74Q6P047 294 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 MAATS1Q7Z4T9 603 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 OR2W6PQ8NHA6 318 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 UHMK1Q8TAS1 419 aaKnown RBP16.67■□□□□ 0.26
EFNB1-201ENST00000204961 OSBPL9Q96SU4 736 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 MTA3Q9BTC8 594 aa16.67■□□□□ 0.26
EFNB1-201ENST00000204961 POTEB2H3BUK9 544 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 PPP1R11O60927 126 aaPredicted RBP16.66■□□□□ 0.26
EFNB1-201ENST00000204961 SYF2O95926 243 aaKnown RBP16.66■□□□□ 0.26
EFNB1-201ENST00000204961 SERPINB2P05120 415 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 FAM153BP0C7A2 387 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 SLC9A1P19634 815 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 ABCB4P21439 1286 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 CARSP49589 748 aaKnown RBP16.66■□□□□ 0.26
EFNB1-201ENST00000204961 LIG3P49916 1009 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 GSTO1P78417 241 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 PDCLQ13371 301 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 FAM153CQ494X1 144 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 FAM26FQ5R3K3 315 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 MYOCDQ8IZQ8 938 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 SPATA4Q8NEY3 305 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 FAM153AQ9UHL3 310 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 ZBTB21Q9ULJ3 1066 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.66■□□□□ 0.26
EFNB1-201ENST00000204961 CASP5P51878 434 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 FAM114A1Q8IWE2 563 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 TSEN2Q8NCE0 465 aaKnown RBP16.66■□□□□ 0.26
EFNB1-201ENST00000204961 EXOC4Q96A65 974 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 TSG101Q99816 390 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 ACBD3Q9H3P7 528 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 RAB21Q9UL25 225 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 DAGLAQ9Y4D2 1042 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 PCDHA1Q9Y5I3 950 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 DUOX1Q9NRD9 1551 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 SPATA31A5Q5VU36 1347 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 SPATA31A7Q8IWB4 1347 aa16.66■□□□□ 0.26
EFNB1-201ENST00000204961 KLRC1P26715 233 aa16.65■□□□□ 0.26
EFNB1-201ENST00000204961 ZNF76P36508 570 aa16.65■□□□□ 0.26
EFNB1-201ENST00000204961 COASYQ13057 564 aa16.65■□□□□ 0.26
EFNB1-201ENST00000204961 ADAM9Q13443 819 aa16.65■□□□□ 0.26
EFNB1-201ENST00000204961 MEX3CQ5U5Q3 659 aaKnown RBP16.65■□□□□ 0.26
EFNB1-201ENST00000204961 LRRC31Q6UY01 552 aa16.65■□□□□ 0.26
EFNB1-201ENST00000204961 CCDC84Q86UT8 332 aaPredicted RBP16.65■□□□□ 0.26
EFNB1-201ENST00000204961 FNBP4Q8N3X1 1017 aaPredicted RBP16.65■□□□□ 0.26
EFNB1-201ENST00000204961 PYM1Q9BRP8 204 aaKnown RBP16.65■□□□□ 0.26
EFNB1-201ENST00000204961 MKRN1Q9UHC7 482 aaKnown RBP16.65■□□□□ 0.26
EFNB1-201ENST00000204961 LRRC4BQ9NT99 713 aa16.65■□□□□ 0.26
EFNB1-201ENST00000204961 RGL1Q9NZL6 768 aa16.65■□□□□ 0.26
EFNB1-201ENST00000204961 M0R2N6 131 aa16.65■□□□□ 0.26
EFNB1-201ENST00000204961 PSMD14O00487 310 aa16.65■□□□□ 0.26
EFNB1-201ENST00000204961 KCNK3O14649 394 aa16.65■□□□□ 0.26
EFNB1-201ENST00000204961 KLHL30Q0D2K2 578 aa16.65■□□□□ 0.26
EFNB1-201ENST00000204961 ALS2CR12Q96Q35 445 aa16.65■□□□□ 0.26
EFNB1-201ENST00000204961 JMJD4Q9H9V9 463 aa16.65■□□□□ 0.26
EFNB1-201ENST00000204961 A0A087X0T9 212 aa16.64■□□□□ 0.25
EFNB1-201ENST00000204961 FAM228BP0C875 321 aa16.64■□□□□ 0.25
EFNB1-201ENST00000204961 MICALL1Q8N3F8 863 aa16.64■□□□□ 0.25
EFNB1-201ENST00000204961 NEDD1Q8NHV4 660 aa16.64■□□□□ 0.25
EFNB1-201ENST00000204961 CCDC43Q96MW1 224 aaKnown RBP16.64■□□□□ 0.25
EFNB1-201ENST00000204961 ZC3H12CQ9C0D7 883 aaKnown RBP16.64■□□□□ 0.25
EFNB1-201ENST00000204961 CEP104O60308 925 aa16.64■□□□□ 0.25
EFNB1-201ENST00000204961 USP8P40818 1118 aa16.64■□□□□ 0.25
EFNB1-201ENST00000204961 GNGT1P63211 74 aa16.64■□□□□ 0.25
EFNB1-201ENST00000204961 FAM83BQ5T0W9 1011 aa16.64■□□□□ 0.25
EFNB1-201ENST00000204961 CCNI2Q6ZMN8 369 aaPredicted RBP16.64■□□□□ 0.25
EFNB1-201ENST00000204961 ZNF287Q9HBT7 754 aa16.64■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms