RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 SPECC1LQ69YQ0 1117 aa20.77■□□□□ 0.92
CTSA-201ENST00000191018 ERMNQ8TAM6 284 aa20.77■□□□□ 0.92
CTSA-201ENST00000191018 DNAJC19Q96DA6 116 aa20.77■□□□□ 0.92
CTSA-201ENST00000191018 ADARB2Q9NS39 739 aaKnown RBP20.77■□□□□ 0.92
CTSA-201ENST00000191018 PNMA2Q9UL42 364 aa20.77■□□□□ 0.92
CTSA-201ENST00000191018 RABGAP1Q9Y3P9 1069 aa20.77■□□□□ 0.92
CTSA-201ENST00000191018 WDR90Q96KV7 1748 aa20.77■□□□□ 0.92
CTSA-201ENST00000191018 RPTORQ8N122 1335 aa20.77■□□□□ 0.92
CTSA-201ENST00000191018 E9PMD0 336 aa20.77■□□□□ 0.92
CTSA-201ENST00000191018 NFIBO00712 420 aa20.77■□□□□ 0.92
CTSA-201ENST00000191018 SPATA31C1P0DKV0 1188 aa20.77■□□□□ 0.92
CTSA-201ENST00000191018 CCNE1P24864 410 aa20.77■□□□□ 0.92
CTSA-201ENST00000191018 PBX1P40424 430 aa20.77■□□□□ 0.92
CTSA-201ENST00000191018 DYMQ7RTS9 669 aa20.77■□□□□ 0.92
CTSA-201ENST00000191018 CATSPER3Q86XQ3 398 aa20.77■□□□□ 0.92
CTSA-201ENST00000191018 MCF2L2Q86YR7 1114 aa20.77■□□□□ 0.92
CTSA-201ENST00000191018 IRF2BP1Q8IU81 584 aa20.77■□□□□ 0.92
CTSA-201ENST00000191018 SAMD3Q8N6K7 520 aa20.77■□□□□ 0.92
CTSA-201ENST00000191018 RAVER2Q9HCJ3 691 aaKnown RBP20.77■□□□□ 0.92
CTSA-201ENST00000191018 MAP3K20Q9NYL2 800 aaKnown RBP20.77■□□□□ 0.92
CTSA-201ENST00000191018 RNF181Q9P0P0 153 aa20.77■□□□□ 0.92
CTSA-201ENST00000191018 C19orf81C9J6K1 198 aa20.76■□□□□ 0.91
CTSA-201ENST00000191018 KRT31Q15323 416 aa20.76■□□□□ 0.91
CTSA-201ENST00000191018 PTPN21Q16825 1174 aa20.76■□□□□ 0.91
CTSA-201ENST00000191018 CEP55Q53EZ4 464 aa20.76■□□□□ 0.91
CTSA-201ENST00000191018 TCP11X2Q5H9J9 407 aa20.76■□□□□ 0.91
CTSA-201ENST00000191018 NCAPH2Q6IBW4 605 aa20.76■□□□□ 0.91
CTSA-201ENST00000191018 CPXCR1Q8N123 301 aa20.76■□□□□ 0.91
CTSA-201ENST00000191018 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.76■□□□□ 0.912e-13■■□□□ 14
CTSA-201ENST00000191018 SLC5A5Q92911 643 aa20.76■□□□□ 0.91
CTSA-201ENST00000191018 COL20A1Q9P218 1284 aa20.76■□□□□ 0.91
CTSA-201ENST00000191018 ZHX2Q9Y6X8 837 aa20.76■□□□□ 0.91
CTSA-201ENST00000191018 MEIS1O00470 390 aa20.75■□□□□ 0.91
CTSA-201ENST00000191018 TEX33O43247 280 aa20.75■□□□□ 0.91
CTSA-201ENST00000191018 PSMD10O75832 226 aa20.75■□□□□ 0.91
CTSA-201ENST00000191018 YBX3P16989 372 aaKnown RBP eCLIP20.75■□□□□ 0.91
CTSA-201ENST00000191018 PSMD2Q13200 908 aa20.75■□□□□ 0.91
CTSA-201ENST00000191018 P2RX5Q93086 422 aa20.75■□□□□ 0.91
CTSA-201ENST00000191018 THAP9Q9H5L6 903 aa20.75■□□□□ 0.91
CTSA-201ENST00000191018 KCNJ18B7U540 433 aa20.75■□□□□ 0.91
CTSA-201ENST00000191018 VWA5AO00534 786 aa20.75■□□□□ 0.91
CTSA-201ENST00000191018 ZBED4O75132 1171 aa20.75■□□□□ 0.91
CTSA-201ENST00000191018 PLA2G4BP0C869 781 aa20.75■□□□□ 0.91
CTSA-201ENST00000191018 ALAS1P13196 640 aa20.75■□□□□ 0.91
CTSA-201ENST00000191018 UBXN2AP68543 259 aa20.75■□□□□ 0.91
CTSA-201ENST00000191018 KCNJ12Q14500 433 aa20.75■□□□□ 0.91
CTSA-201ENST00000191018 OTOP1Q7RTM1 612 aa20.75■□□□□ 0.91
CTSA-201ENST00000191018 HPS3Q969F9 1004 aa20.75■□□□□ 0.91
CTSA-201ENST00000191018 DUSP9Q99956 384 aaKnown RBP20.75■□□□□ 0.91
CTSA-201ENST00000191018 FRMPD4Q14CM0 1322 aa20.74■□□□□ 0.91
CTSA-201ENST00000191018 BICDL2A1A5D9 508 aa20.74■□□□□ 0.91
CTSA-201ENST00000191018 POTEFA5A3E0 1075 aa20.74■□□□□ 0.91
CTSA-201ENST00000191018 USP2O75604 605 aaPredicted RBP20.74■□□□□ 0.91
CTSA-201ENST00000191018 POTEIP0CG38 1075 aa20.74■□□□□ 0.91
CTSA-201ENST00000191018 SLC12A3P55017 1021 aa20.74■□□□□ 0.91
CTSA-201ENST00000191018 SETQ01105 290 aaPredicted RBP20.74■□□□□ 0.91
CTSA-201ENST00000191018 PPP2R5CQ13362 524 aa20.74■□□□□ 0.91
CTSA-201ENST00000191018 FILIP1LQ4L180 1135 aa20.74■□□□□ 0.91
CTSA-201ENST00000191018 MUM1L1Q5H9M0 696 aa20.74■□□□□ 0.91
CTSA-201ENST00000191018 POTEGQ6S5H5 508 aa20.74■□□□□ 0.91
CTSA-201ENST00000191018 POTEEQ6S8J3 1075 aa20.74■□□□□ 0.91
CTSA-201ENST00000191018 KCTD17Q8N5Z5 321 aa20.74■□□□□ 0.91
CTSA-201ENST00000191018 NOC3LQ8WTT2 800 aaKnown RBP20.74■□□□□ 0.91
CTSA-201ENST00000191018 POLR3CQ9BUI4 534 aaPredicted RBP20.74■□□□□ 0.91
CTSA-201ENST00000191018 TMX1Q9H3N1 280 aa20.74■□□□□ 0.91
CTSA-201ENST00000191018 SLC39A2Q9NP94 309 aa20.74■□□□□ 0.91
CTSA-201ENST00000191018 KCND1Q9NSA2 647 aa20.74■□□□□ 0.91
CTSA-201ENST00000191018 ADAMTS5Q9UNA0 930 aa20.74■□□□□ 0.91
CTSA-201ENST00000191018 OTOFQ9HC10 1997 aa20.74■□□□□ 0.91
CTSA-201ENST00000191018 EML1O00423 815 aa20.73■□□□□ 0.91
CTSA-201ENST00000191018 CYP11B2P19099 503 aa20.73■□□□□ 0.91
CTSA-201ENST00000191018 KCNJ6P48051 423 aa20.73■□□□□ 0.91
CTSA-201ENST00000191018 HMGCS2P54868 508 aa20.73■□□□□ 0.91
CTSA-201ENST00000191018 CENPPQ6IPU0 288 aa20.73■□□□□ 0.91
CTSA-201ENST00000191018 GUF1Q8N442 669 aaKnown RBP20.73■□□□□ 0.91
CTSA-201ENST00000191018 REPS2Q8NFH8 660 aa20.73■□□□□ 0.91
CTSA-201ENST00000191018 ATG4CQ96DT6 458 aa20.73■□□□□ 0.91
CTSA-201ENST00000191018 TRIM47Q96LD4 638 aa20.73■□□□□ 0.91
CTSA-201ENST00000191018 AFG3L2Q9Y4W6 797 aa20.73■□□□□ 0.91
CTSA-201ENST00000191018 PTPRFP10586 1907 aa20.73■□□□□ 0.91
CTSA-201ENST00000191018 IDEP14735 1019 aa20.73■□□□□ 0.91
CTSA-201ENST00000191018 EEF1GP26641 437 aaKnown RBP20.73■□□□□ 0.91
CTSA-201ENST00000191018 COPB1P53618 953 aaKnown RBP20.73■□□□□ 0.91
CTSA-201ENST00000191018 LRCH2Q5VUJ6 765 aa20.73■□□□□ 0.91
CTSA-201ENST00000191018 ANKRD40Q6AI12 368 aa20.73■□□□□ 0.91
CTSA-201ENST00000191018 ANKRD20A12PQ8NF67 263 aa20.73■□□□□ 0.91
CTSA-201ENST00000191018 WNK4Q96J92 1243 aa20.73■□□□□ 0.91
CTSA-201ENST00000191018 MXRA8Q9BRK3 442 aa20.73■□□□□ 0.91
CTSA-201ENST00000191018 BMP2KQ9NSY1 1161 aaPredicted RBP20.73■□□□□ 0.91
CTSA-201ENST00000191018 BCRP11274 1271 aa20.72■□□□□ 0.91
CTSA-201ENST00000191018 COASYQ13057 564 aa20.72■□□□□ 0.91
CTSA-201ENST00000191018 B3GNT9Q6UX72 402 aa20.72■□□□□ 0.91
CTSA-201ENST00000191018 CCDC112Q8NEF3 446 aa20.72■□□□□ 0.91
CTSA-201ENST00000191018 SYTL5Q8TDW5 730 aaPredicted RBP20.72■□□□□ 0.91
CTSA-201ENST00000191018 HSD17B14Q9BPX1 270 aa20.72■□□□□ 0.91
CTSA-201ENST00000191018 EIF2AK1Q9BQI3 630 aaKnown RBP20.72■□□□□ 0.91
CTSA-201ENST00000191018 SRRTQ9BXP5 876 aaKnown RBP20.72■□□□□ 0.91
CTSA-201ENST00000191018 SEMA6BQ9H3T3 888 aa20.72■□□□□ 0.91
CTSA-201ENST00000191018 FRMD3A2A2Y4 597 aa20.71■□□□□ 0.91
CTSA-201ENST00000191018 ARP10275 920 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 1498.5 ms