RNA–Protein interactions for RNA: ENSMUST00000213114.1

Ldlr-202, Transcript of Low-density lipoprotein receptor, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldlr, Length 4,318 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldlr-202ENSMUST00000213114 RaraP11416 462 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Tph1P17532 447 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Pla2g4aP47713 748 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Psd3Q2PFD7 1037 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Olfr832Q7TRG9 312 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Naa25Q8BWZ3 972 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Tmem60Q8K174 133 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Cplx3Q8R1B5 158 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Ribc1Q9D0B8 379 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 4921524L21RikQ9D5T2 438 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Rbm6S4R1W5 1118 aaKnown RBP10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Axin2O88566 840 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Krt86P97861 486 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Vars2Q3U2A8 1060 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Slc2a13Q3UHK1 637 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Mapk6Q61532 720 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Krt77Q6IFZ6 572 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Ints8Q80V86 995 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Yipf1Q91VU1 306 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Grin3bQ91ZU9 1003 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Prc1Q99K43 603 aaKnown RBP10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Creld2Q9CYA0 350 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Pabpc1lA2A5N3 607 aaKnown RBP10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Gimd1E9PW74 217 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Setd4P58467 439 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Kmt5aQ2YDW7 349 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Dpcr1Q3TNW5 500 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Rnf40Q3U319 1001 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Gtpbp6Q3U6U5 514 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Ppp1r7Q3UM45 361 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Fam183bQ5NC57 135 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Vmn1r209Q5NC97 312 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Ddx3yQ62095 658 aaKnown RBP10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Spa17Q62252 149 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Hpcal4Q8BGZ1 191 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Spice1Q8C804 860 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Ccdc38Q8CDN8 563 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Tpd52l2Q9CYZ2 220 aaKnown RBP10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Ddx25Q9QY15 484 aa10.31□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Vmn2r79E9Q067 851 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Rgs22G3UYX5 1258 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Ncf2O70145 525 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Rnaseh1O70338 285 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Gdap1O88741 358 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 XlrP05531 208 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Stat3P42227 770 aaKnown RBP10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Plekhf1Q3TB82 279 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Fhdc1Q3ULZ2 1149 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Olfr121Q5CZY0 321 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Mybpc2Q5XKE0 1136 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Slc17a8Q8BFU8 601 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Iws1Q8C1D8 766 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Tada3Q8R0L9 432 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 4931423N10RikQ9D4J9 382 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Aox3G3X982 1335 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 A0A286YCQ6 122 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Serpina16D3Z660 418 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Dzip1lQ499E4 774 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Znf827Q505G8 1078 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Usp13Q5BKP2 858 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Bzw2Q91VK1 419 aaKnown RBP10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Mtmr4Q91XS1 1190 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Atp6v0a4Q920R6 833 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 SarnpQ9D1J3 210 aaKnown RBP10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Nop56Q9D6Z1 580 aaKnown RBP10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Trpc3Q9QZC1 836 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Naaladl2A0A0N4SUJ3 795 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Map7d1A2AJI0 846 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Lmnb2P21619 596 aaKnown RBP10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Xrcc5P27641 732 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Adcy7P51829 1099 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Acad11Q80XL6 779 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Cbwd1Q8VEH6 393 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Dr1Q91WV0 176 aa10.3□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Igsf9bE9PZ19 1328 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 GpiP06745 558 aaKnown RBP10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Aimp1P31230 310 aaKnown RBP10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Sec23aQ01405 765 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 SlmapQ3URD3 845 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Drc1Q3USS3 753 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 C130026I21RikQ8C898 291 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Fermt3Q8K1B8 665 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Q8K2W9 541 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Tob2Q9JM55 345 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Nek3Q9R0A5 511 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Med1Q925J9 1575 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Lrrc74aA0A1Y7VMD6 494 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Herc3A6H6S0 1050 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Tcp10bE9PYJ0 438 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Vmn2r71L7N2D8 855 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 NfrkbQ6PIJ4 1296 aaKnown RBP10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 F13a1Q8BH61 732 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Myef2Q8C854 591 aaKnown RBP10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Shtn1Q8K2Q9 631 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Mtmr6Q8VE11 617 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 SncbQ91ZZ3 133 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Filip1Q9CS72 1211 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 H2-OaQ9QWV1 250 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Angptl3Q9R182 455 aa10.29□□□□□ -0.76
Ldlr-202ENSMUST00000213114 Adamtsl3G3UXC7 1706 aa10.29□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 26.4 ms