RNA–Protein interactions for RNA: ENSMUST00000177588.7

Lig1-211, Transcript of DNA ligase 1, mousemouse

APPRIS P1 TSL 5 BASIC

Gene Lig1, Length 3,174 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig1-211ENSMUST00000177588 Kif22Q3V300 660 aa12.46□□□□□ -0.42
Lig1-211ENSMUST00000177588 Snip1Q8BIZ6 383 aaKnown RBP12.46□□□□□ -0.42
Lig1-211ENSMUST00000177588 Slc44a4Q91VA1 707 aa12.46□□□□□ -0.42
Lig1-211ENSMUST00000177588 Smc6Q924W5 1097 aa12.46□□□□□ -0.42
Lig1-211ENSMUST00000177588 SetQ9EQU5 289 aaKnown RBP12.46□□□□□ -0.42
Lig1-211ENSMUST00000177588 Plcb1Q9Z1B3 1216 aa12.46□□□□□ -0.42
Lig1-211ENSMUST00000177588 Arid4aF8VPQ2 1261 aaKnown RBP12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Atp6v1aP50516 617 aaKnown RBP12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Ccdc33Q3ULW6 985 aa12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Fxr1Q61584 677 aaKnown RBP12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Kcnj11Q61743 390 aa12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Krt74Q6IFZ9 495 aa12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Tmem179Q8BHH9 233 aa12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Calcoco1Q8CGU1 691 aa12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Tjap1Q9DCD5 539 aa12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Tmem47Q9JJG6 181 aa12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Clip2Q9Z0H8 1047 aa12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Sel1lQ9Z2G6 790 aa12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Cyp2ab1S4R196 498 aa12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Gm3893E9Q1I1 302 aa12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 XlrP05531 208 aa12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Cd44P15379 778 aa12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Ighmbp2P40694 993 aa12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Chrna5Q2MKA5 467 aa12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Nsrp1Q5NCR9 542 aa12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Fam193aQ8CGI1 1231 aaKnown RBP12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Pak2Q8CIN4 524 aa12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Kbtbd4Q8R179 534 aa12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Lrrc42Q8R2U7 421 aa12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Trmt44Q9D2Q2 713 aa12.45□□□□□ -0.42
Lig1-211ENSMUST00000177588 Gm7356A0A087WSA6 508 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Abcb4P21440 1276 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Pstpip1P97814 415 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Znf827Q505G8 1078 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Tnni3kQ5GIG6 834 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Armcx3Q8BHS6 379 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Rassf10Q8BL43 508 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Rassf2Q8BMS9 326 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 TxlnbQ8VBT1 685 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Spata17Q9D552 379 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Acot3Q9QYR7 432 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Epb41l3Q9WV92 929 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Gm28510A0A087WP28 240 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Gm4985A2ALC6 410 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Gad1P48318 593 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Prom2Q3UUY6 835 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Drd5Q8BLD9 478 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Ttc22Q8C159 568 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 IntS13Q8QZV7 732 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Ebag9Q9D0V7 213 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Arl2bpQ9D385 163 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Cd274Q9EP73 290 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Slc40a1Q9JHI9 570 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Tfap4Q9JIZ5 338 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Gm7168A0AUV4 508 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Tcp10bE9PYJ0 438 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Mboat4P0C7A3 435 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Tex11Q14AT2 947 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Git1Q68FF6 770 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Naa35Q6PHQ8 725 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Pip5kl1Q6U7H8 395 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Ccdc172Q810N9 267 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Arhgef19Q8BWA8 802 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Lrrc41Q8K1C9 807 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Kremen1Q99N43 473 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Actn2Q9JI91 894 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Homer1Q9Z2Y3 366 aa12.44□□□□□ -0.42
Lig1-211ENSMUST00000177588 Gna11P21278 359 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Epb41l4aP52963 686 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Znf667Q2TL60 609 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 GopcQ8BH60 463 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Cc2d1bQ8BRN9 848 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Ccdc186Q8C9S4 917 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Lzts2Q91YU6 671 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Vwa5aQ99KC8 793 aaKnown RBP12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Gtf2iQ9ESZ8 998 aaKnown RBP12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Tjp2Q9Z0U1 1167 aaKnown RBP12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Sned1Q70E20 1403 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Plekhg2Q6KAU7 1340 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Gjb6P70689 261 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Irx1P81068 480 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Gas1Q01721 343 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Rhpn1Q61085 643 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Pcsk7Q61139 770 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Best3Q6H1V1 669 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Tlr11Q6R5P0 926 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 NkrfQ8BY02 690 aaKnown RBP12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Myl6bQ8CI43 207 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 AdpgkQ8VDL4 496 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 VillQ91YD6 859 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 WaslQ91YD9 501 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 1700020D05RikQ99PB1 294 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Ccdc105Q9D4K7 499 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Slc5a4aQ9ET37 656 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Gkap1Q9JMB0 366 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 GgcxQ9QYC7 757 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Tnip1Q9WUU8 647 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Adamtsl1Q8BLI0 1745 aa12.43□□□□□ -0.42
Lig1-211ENSMUST00000177588 Btbd18A0A0A6YY25 723 aa12.42□□□□□ -0.42
Lig1-211ENSMUST00000177588 Flt3Q00342 1000 aa12.42□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 28.2 ms