RNA–Protein interactions for RNA: ENSMUST00000165165.2

Col6a5-201, Transcript of Collagen alpha-5(VI) chain, mousemouse

TSL 5 BASIC

Gene Col6a5, Length 8,046 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a5-201ENSMUST00000165165 Lamc3Q9R0B6 1581 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Kdm5aQ3UXZ9 1690 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Large2Q5XPT3 690 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Q80Y73 168 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 IarsQ8BU30 1262 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Tpcn2Q8BWC0 731 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Nod2Q8K3Z0 1020 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Klhl40Q9D783 621 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ndel1Q9ERR1 345 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Stk11Q9WTK7 436 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ppip5k1A2ARP1 1436 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Zc3h4Q6ZPZ3 1304 aaKnown RBP10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 TriqkB2B9E1 86 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Gm3755K7N743 167 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Nme8Q715T0 586 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Gramd1bQ80TI0 738 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 CnstQ8CBC4 711 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Prpsap2Q8R574 369 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Aipl1Q924K1 328 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Gm21488A0A087WR99 222 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ect2Q07139 913 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Zbtb8osQ505B7 168 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Usp6nlQ80XC3 819 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Slc35f6Q8VE96 372 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Khdc3Q9CWU5 440 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Tfcp2Q9ERA0 502 aa10.04□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Prl7a2O54831 253 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 E2f8Q58FA4 860 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Atp2b4Q6Q477 1205 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ano5Q75UR0 904 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ephb1Q8CBF3 984 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Kcnj14Q8JZN3 434 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ing3Q8VEK6 421 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Crlf3Q9Z2L7 442 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ino80bQ99PT3 375 aaKnown RBP10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Med7Q9CZB6 233 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 PudpQ9D5U5 234 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Ttll7A4Q9F0 912 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Gm4841E9QAA8 417 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Inpp1P49442 396 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Pcif1P59114 706 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Olfm4Q3UZZ4 505 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Dhx37Q6NZL1 1150 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Dars2Q8BIP0 653 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Rnf112Q96DY5 654 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Trim12aQ99PQ1 284 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Tmed10Q9D1D4 219 aaKnown RBP10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Mug1P28665 1476 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Gm21962L7N280 338 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Tmod1P49813 359 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Zbtb45Q52KG4 520 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Itih1Q61702 907 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Fchsd1Q6PFY1 688 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Art3Q8R2G4 371 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Mlh1Q9JK91 760 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Serpinb6cW4VSP4 379 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Slc4a9E9PUP3 929 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Stam2O88811 523 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 S100a6P14069 89 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Morc2aQ69ZX6 1030 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Yars2Q8BYL4 472 aaKnown RBP10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Slc18a1Q8R090 521 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Cbwd1Q8VEH6 393 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Rrp15Q9CYX7 281 aaKnown RBP10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Frmpd2A0A140LI67 1392 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Myh7Q91Z83 1935 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Gm8879F6R3J9 157 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Esr2O08537 530 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Map3k12Q60700 888 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Tbc1d1Q60949 1255 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Fkbp3Q62446 224 aaKnown RBP10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Q6PD19 689 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Q80ZQ3 298 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Gins2Q9D600 185 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Caln1Q9JJG7 219 aa10.03□□□□□ -0.8
Col6a5-201ENSMUST00000165165 PtprcP06800 1291 aa10.02□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Sh3gl1Q62419 368 aa10.02□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Trim56Q80VI1 734 aaKnown RBP10.02□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Tp53bp2Q8CG79 1128 aa10.02□□□□□ -0.8
Col6a5-201ENSMUST00000165165 Naip5Q9R016 1403 aa10.02□□□□□ -0.8
Col6a5-201ENSMUST00000165165 L3mbtl1A2A5N8 826 aa10.02□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Klhl41A2AUC9 606 aa10.02□□□□□ -0.81
Col6a5-201ENSMUST00000165165 JrklB2RRL2 523 aa10.02□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Sec24cG3X972 1096 aaKnown RBP10.02□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Upf3bQ3ULL6 472 aa10.02□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Olfml3Q8BK62 406 aa10.02□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Bicc1Q99MQ1 977 aaKnown RBP10.02□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Dctn3Q9Z0Y1 186 aa10.02□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Tcp11x2A2AEI7 503 aa10.02□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Ttc17E9PVB5 1198 aa10.02□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Psmc3O88685 442 aa10.02□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Sesn2P58043 480 aa10.02□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Arl4aP61213 200 aa10.02□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Tekt4Q149S1 447 aa10.02□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Gtf2a1lQ8R4I4 468 aa10.02□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Ddah1Q9CWS0 285 aa10.02□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Ddx21Q9JIK5 851 aaKnown RBP10.02□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Abcc5Q9R1X5 1436 aa10.02□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Uhmk1P97343 419 aa10.02□□□□□ -0.81
Col6a5-201ENSMUST00000165165 Miga1Q4QQM5 600 aa10.02□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 26.8 ms