RNA–Protein interactions for RNA: ENSMUST00000088716.11

Smarcc1-201, Transcript of SWI/SNF complex subunit SMARCC1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Smarcc1, Length 5,717 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcc1-201ENSMUST00000088716 Eif2ak1Q9Z2R9 619 aa23.38■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Exoc7O35250 697 aa23.38■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Pik3r1P26450 724 aa23.38■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Dync1li2Q6PDL0 492 aaKnown RBP23.38■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Cep57Q8CEE0 500 aa23.38■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Nek9Q8K1R7 984 aa23.38■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Smc6Q924W5 1097 aa23.38■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Twf2Q9Z0P5 349 aaKnown RBP23.38■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Ttc41Q692V3 1318 aa23.37■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Mageb2A2AHM0 380 aa23.37■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Arl4aP61213 200 aa23.37■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Susd4Q8BH32 490 aa23.37■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Kif9Q9WV04 790 aa23.37■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Cul4bA2A432 970 aaKnown RBP23.37■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Card6E9PWH2 1175 aa23.37■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 P2rx5Q3UYI1 455 aa23.37■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 AlcamQ61490 583 aa23.37■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 McamQ8R2Y2 648 aaKnown RBP23.37■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Cyp3a25O09158 503 aa23.37■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Taf1bP97358 586 aa23.37■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Sorbs1Q62417 1290 aa23.37■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Sv2cQ69ZS6 727 aa23.37■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Mtrf1lQ8BJU9 373 aa23.37■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Hps3Q91VB4 1002 aa23.37■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Tns3Q5SSZ5 1440 aa23.37■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Veph1A1A535 833 aa23.37■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Dnaaf5B9EJR8 853 aa23.37■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Ppp1r7Q3UM45 361 aa23.37■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 OtulinQ3UCV8 352 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Strip1Q8C079 837 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Cog4Q8R1U1 785 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Ces1Q8VCC2 565 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Dynlt1P51807 113 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Nr1d1Q3UV55 615 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Tmtc1Q3UV71 942 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Mis12Q9CY25 206 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Zc3h18Q0P678 948 aaKnown RBP23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Fra10ac1Q8BP78 315 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Stxbp5Q8K400 1152 aaKnown RBP23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Tmed2Q9R0Q3 201 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Casp14O89094 257 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Kpna2P52293 529 aaKnown RBP23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Ppfia2Q8BSS9 1257 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Pcdhb15Q91Y04 786 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Coa7Q921H9 231 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Gins2Q9D600 185 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Ndst4Q9EQW8 872 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Ecel1Q9JMI0 775 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Uggt1Q6P5E4 1551 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Pnma5Q5DTT8 618 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Spata21Q8BHW6 681 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 4930449I24RikQ9D5E3 319 aa23.36■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Gm28042B7ZCM9 1014 aa23.35■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Gngt2Q61017 69 aa23.35■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Akap7Q7TN79 314 aa23.35■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Snx14Q8BHY8 964 aa23.35■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Serpina3iD3Z450 408 aa23.35■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Mysm1Q69Z66 819 aa23.35■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Rpa3Q9CQ71 121 aa23.35■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Klhl34A2AI76 644 aa23.35■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Srp68Q8BMA6 625 aaKnown RBP23.35■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Tspyl4Q8VD63 406 aa23.35■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Pla2g4eQ50L42 875 aa23.35■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Utp11Q9CZJ1 253 aaKnown RBP23.35■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Tmod3Q9JHJ0 352 aa23.35■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Tex21Q9R0U9 575 aa23.35■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Eef2kO08796 724 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Rsad1Q5SUV1 442 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Hoxa13Q62424 386 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Hic2Q9JLZ6 619 aaKnown RBP23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Pramel6Q810Y9 485 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Slc12a6Q924N4 1150 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Prpsap1Q9D0M1 356 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Snx1Q9WV80 522 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Krt36B1AQ75 473 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Per2O54943 1257 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Ccdc153P0C7Q1 202 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 CatspereP0DP43 985 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Pald1P70261 859 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Cep126Q0VBV7 1103 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Klhl14Q69ZK5 630 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 BcrQ6PAJ1 1270 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 RabggtaQ9JHK4 567 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Tmed8Q3UHI4 326 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Cyp2c67Q569X9 491 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Sgsm1Q8BPQ7 1093 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Rpap2Q8VC34 614 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Ror2Q9Z138 944 aa23.34■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Scg2Q03517 617 aa23.33■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Nab2Q61127 525 aa23.33■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Krt40Q6IFX3 439 aa23.33■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Nme8Q715T0 586 aa23.33■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 E330017A01RikQ8BU47 192 aa23.33■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Setd3Q91WC0 594 aa23.33■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Caln1Q9JJG7 219 aa23.33■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Map3k4O08648 1597 aa23.33■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Nid2O88322 1403 aa23.33■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Brpf3B2KF05 1204 aaKnown RBP23.33■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 Stx1bP61264 288 aa23.33■■□□□ 1.33
Smarcc1-201ENSMUST00000088716 PapolaQ61183 739 aa23.33■■□□□ 1.33
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms