RNA–Protein interactions for RNA: ENSMUST00000087158.10

Trim40-201, Transcript of Tripartite motif-containing protein 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Trim40, Length 2,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40-201ENSMUST00000087158 Apol10aQ8CCA5 318 aa8.41□□□□□ -1.06
Trim40-201ENSMUST00000087158 HyiQ8R1F5 277 aa8.41□□□□□ -1.06
Trim40-201ENSMUST00000087158 Mtmr6Q8VE11 617 aa8.41□□□□□ -1.06
Trim40-201ENSMUST00000087158 Nr3c2Q8VII8 978 aa8.41□□□□□ -1.06
Trim40-201ENSMUST00000087158 Atp5c1Q91VR2 298 aaKnown RBP8.41□□□□□ -1.06
Trim40-201ENSMUST00000087158 Ascc2Q91WR3 749 aa8.41□□□□□ -1.06
Trim40-201ENSMUST00000087158 Tgs1Q923W1 853 aa8.41□□□□□ -1.06
Trim40-201ENSMUST00000087158 Cmtm5Q9D6G9 156 aa8.41□□□□□ -1.06
Trim40-201ENSMUST00000087158 SelenooQ9DBC0 667 aa8.41□□□□□ -1.06
Trim40-201ENSMUST00000087158 Tacc2Q9JJG0 1149 aa8.41□□□□□ -1.06
Trim40-201ENSMUST00000087158 ChmQ9QXG2 665 aa8.41□□□□□ -1.06
Trim40-201ENSMUST00000087158 Ddx23D3Z0M9 819 aaKnown RBP8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Gm5934D3Z4U6 212 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Ankrd35E9Q9D8 996 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Pagr1bF6V0H0 108 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Zc3h7bF8VPP8 982 aaKnown RBP8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Kcnj4P52189 445 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Mmp20P57748 482 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Acot10Q32MW3 439 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Mettl14Q3UIK4 456 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Kif5bQ61768 963 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Znf532Q6NXK2 1036 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Mapk4Q6P5G0 583 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Fbxo28Q8BIG4 368 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Nop9Q8BMC4 636 aaKnown RBP8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Gjd4Q8BSD4 364 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Tmem63cQ8CBX0 802 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Brd3Q8K2F0 726 aaKnown RBP8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Slc18a1Q8R090 521 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Tada3Q8R0L9 432 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Rab3il1Q8VDV3 383 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Tdrd3Q91W18 743 aaKnown RBP8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Pcdha7Q91Y13 937 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Pagr1aQ99L02 253 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Kremen1Q99N43 473 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Rhobtb3Q9CTN4 611 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Syce1Q9D495 329 aa8.4□□□□□ -1.06
Trim40-201ENSMUST00000087158 Gm15448F6PZL4 682 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Capn2O08529 700 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Has3O08650 554 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Sptlc1O35704 473 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Pbx1P41778 430 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Sparcl1P70663 650 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Lrrc36Q3V0M2 755 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Rgl1Q60695 768 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Cnot7Q60809 285 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Eif3j2Q66JS6 263 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Prdm4Q80V63 803 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Thap3Q8BJ25 218 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Pnpla2Q8BJ56 486 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Slc4a8Q8JZR6 1089 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Ces4aQ8R0W5 563 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Exoc1Q8R3S6 894 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Psmd2Q8VDM4 908 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Kdm4bQ91VY5 1086 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 BaatQ91X34 420 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Tc2nQ91XT6 489 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Tor1aip1Q921T2 595 aaKnown RBP8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Gnl2Q99LH1 728 aaKnown RBP8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Ddah1Q9CWS0 285 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Serpinb12Q9D7P9 423 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 CsadQ9DBE0 493 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Tjp3Q9QXY1 905 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Sbf2E9PXF8 1872 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Ttc6G3UYY4 1857 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 AW822073A0A0N4SUK1 652 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Map7d2A2AG50 781 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Speer4f2E9Q366 295 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 CfhP06909 1234 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Nlrx1Q3TL44 975 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Pls1Q3V0K9 630 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Ankrd40Q5SUE8 363 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Sp4Q62445 782 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Ddx19bQ8BZY3 494 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Trim35Q8C006 501 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Acat1Q8QZT1 424 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 FktnQ8R507 461 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Fam76aQ922G2 307 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Eif2ak1Q9Z2R9 619 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 PatjQ63ZW7 1834 aa8.39□□□□□ -1.07
Trim40-201ENSMUST00000087158 Gm7168A0AUV4 508 aa8.38□□□□□ -1.07
Trim40-201ENSMUST00000087158 Kif3cO35066 796 aa8.38□□□□□ -1.07
Trim40-201ENSMUST00000087158 Fgl2P12804 432 aa8.38□□□□□ -1.07
Trim40-201ENSMUST00000087158 Stat3P42227 770 aaKnown RBP8.38□□□□□ -1.07
Trim40-201ENSMUST00000087158 Nf2P46662 596 aa8.38□□□□□ -1.07
Trim40-201ENSMUST00000087158 Ccdc102aQ3TMW1 549 aa8.38□□□□□ -1.07
Trim40-201ENSMUST00000087158 Arglu1Q3UL36 271 aaKnown RBP8.38□□□□□ -1.07
Trim40-201ENSMUST00000087158 Brd9Q3UQU0 596 aaKnown RBP8.38□□□□□ -1.07
Trim40-201ENSMUST00000087158 Spata21Q8BHW6 681 aa8.38□□□□□ -1.07
Trim40-201ENSMUST00000087158 Igdcc3Q8BQC3 813 aa8.38□□□□□ -1.07
Trim40-201ENSMUST00000087158 Ago4Q8CJF8 861 aa8.38□□□□□ -1.07
Trim40-201ENSMUST00000087158 Mical1Q8VDP3 1048 aa8.38□□□□□ -1.07
Trim40-201ENSMUST00000087158 NkapQ9D0F4 415 aaKnown RBP8.38□□□□□ -1.07
Trim40-201ENSMUST00000087158 Pabpc6Q9D4E6 643 aaKnown RBP8.38□□□□□ -1.07
Trim40-201ENSMUST00000087158 Ccdc105Q9D4K7 499 aa8.38□□□□□ -1.07
Trim40-201ENSMUST00000087158 Abcb6Q9DC29 842 aa8.38□□□□□ -1.07
Trim40-201ENSMUST00000087158 Copb1Q9JIF7 953 aa8.38□□□□□ -1.07
Trim40-201ENSMUST00000087158 Usp14Q9JMA1 493 aaKnown RBP8.38□□□□□ -1.07
Trim40-201ENSMUST00000087158 Chaf1aQ9QWF0 911 aa8.38□□□□□ -1.07
Trim40-201ENSMUST00000087158 Tnip1Q9WUU8 647 aa8.38□□□□□ -1.07
Retrieved 100 of 22,080 RNA–protein pairs in 26.3 ms