RNA–Protein interactions for RNA: ENSMUST00000076313.12

Prpf40a-201, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Prpf40a, Length 7,374 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-201ENSMUST00000076313 Mettl24Q8CCB5 363 aa10.14□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Kcnv2Q8CFS6 562 aa10.14□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Prpf3Q922U1 683 aaKnown RBP10.14□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Krt34Q9D646 392 aa10.14□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Slc39a2G3X943 309 aa10.14□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Dynlt1P51807 113 aa10.14□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Hdac4Q6NZM9 1076 aa10.14□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ppp4r4Q8C0Y0 875 aa10.14□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Psma8Q9CWH6 250 aa10.14□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Pde6bP23440 856 aa10.14□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Sesn2P58043 480 aa10.14□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Zdhhc9P59268 364 aa10.14□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ivns1abpQ920Q8 642 aa10.14□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Cul1Q9WTX6 776 aa10.14□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Kif14L0N7N1 1674 aaKnown RBP10.14□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Adssl1P28650 457 aa10.14□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Gm14685Q52KH6 695 aa10.14□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Mapk6Q61532 720 aa10.14□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Dnajb6O54946 365 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ephb4P54761 987 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Skap2Q3UND0 358 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Map3k7Q62073 579 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Wdr27Q8C5V5 780 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ints9Q8K114 658 aaKnown RBP10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 C1qbpO35658 278 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Llgl2Q3TJ91 1027 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Stkld1Q80YS9 662 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Pus7lQ8CE46 702 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Pdlim2Q8R1G6 349 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Basp1Q91XV3 226 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Thap2Q9D305 217 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Spata17Q9D552 379 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Mrps9Q9D7N3 390 aaKnown RBP10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Gm21962L7N280 338 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Exoc7O35250 697 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Mtrf1lQ8BJU9 373 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Thoc1Q8R3N6 657 aaKnown RBP10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Rmi1Q9D4G9 616 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ttc13A0A1L1SSC7 844 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Slc3a2P10852 526 aaKnown RBP10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Golph3lQ8R088 285 aaKnown RBP10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Tgs1Q923W1 853 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Gimap4Q99JY3 219 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Pls3Q99K51 630 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Grtp1Q9D3N8 359 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Rmdn1Q9DCV4 305 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 VdrP48281 422 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Uhmk1P97343 419 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 L3mbtl3Q8BLB7 883 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 CgasQ8C6L5 507 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ttll1Q91V51 423 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Stk11Q9WTK7 436 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Nek1P51954 1203 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Carmil2Q3V3V9 1296 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Slc9a2Q3ZAS0 814 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Rrp1bQ91YK2 724 aaKnown RBP10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Col15a1O35206 1367 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Abcc12Q80WJ6 1366 aa10.13□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Cyp3a25O09158 503 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Sstr3P30935 428 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Gpc4P51655 557 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Trim71Q1PSW8 855 aaKnown RBP10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Gucy2cQ3UWA6 1072 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Hpcal4Q8BGZ1 191 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Calr3Q9D9Q6 380 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 IcoslgQ9JHJ8 322 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Rgs12Q8CGE9 1381 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 FosP01101 380 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ms4a2P20490 235 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Cep126Q0VBV7 1103 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Eepd1Q3TGW2 569 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 LrmpQ60664 539 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Cyp7b1Q60991 507 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ripor2Q80U16 1078 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Nrbp2Q91V36 499 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Orc3Q9JK30 715 aaKnown RBP10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Abt1Q9QYL7 269 aaKnown RBP10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Atp10aO54827 1508 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Kdm6bQ5NCY0 1641 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Gm4841E9QAA8 417 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Pald1P70261 859 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Atp1b3P97370 278 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Gngt2Q61017 69 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 KhnynQ80U38 671 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Msh6P54276 1358 aaKnown RBP10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Fhod3Q76LL6 1578 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Lrriq1Q0P5X1 1673 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Erbb4Q61527 1308 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ube4aE9Q735 1028 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Ccdc153P0C7Q1 202 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 PhexP70669 749 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Thumpd3P97770 505 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Dpcr1Q3TNW5 500 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Trim17Q7TPM3 477 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 AdalQ80SY6 360 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Dynll2Q9D0M5 89 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 MlklQ9D2Y4 472 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Add2Q9QYB8 725 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Cyp11b2P15539 500 aa10.12□□□□□ -0.79
Prpf40a-201ENSMUST00000076313 Eno1P17182 434 aaKnown RBP10.12□□□□□ -0.79
Retrieved 100 of 22,080 RNA–protein pairs in 14.5 ms