RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Cabp5Q9JLK3 173 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Arl6ip4Q9JM93 229 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Klra17Q9JMA4 273 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Epb41l3Q9WV92 929 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Apol10bG3X9K7 334 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Ptpn12P35831 775 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Stat3P42227 770 aaKnown RBP10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Nr1d1Q3UV55 615 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Ttbk2Q3UVR3 1243 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Ddx49Q4FZF3 480 aaKnown RBP10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Shc3Q61120 474 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Akap8Q9DBR0 687 aaKnown RBP10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Bcl9lQ67FY2 1494 aa10.69□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Wnk3Q80XP9 1757 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Lbhd1A0A087WPA0 259 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Krt18P05784 423 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 MlxipQ2VPU4 917 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Nlrx1Q3TL44 975 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Gtpbp6Q3U6U5 514 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Drc1Q3USS3 753 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Kif5bQ61768 963 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Antxr2Q6DFX2 487 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Iffo1Q8BXL9 562 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Tbx22Q8K402 517 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Spc24Q9D083 201 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Tbx18Q9EPZ6 613 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Col3a1P08121 1464 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Psmd14O35593 310 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Dnajb6O54946 365 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 XlrP05531 208 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 AsnsQ61024 561 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 FntaQ61239 377 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Atxn2lQ7TQH0 1049 aaKnown RBP10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Fam228aQ8CDW1 299 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Lsm14bQ8CGC4 385 aaKnown RBP10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Prpf6Q91YR7 941 aaKnown RBP10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 PdhbQ9D051 359 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Tex21Q9R0U9 575 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Adgra3Q7TT36 1310 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Clcn6O35454 870 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Kcnb1Q03717 857 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Atp8b1Q148W0 1251 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Lrrc15Q80X72 579 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 GzmnQ920S1 248 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 MlxiplQ99MZ3 864 aa10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Syf2Q9D198 242 aaKnown RBP10.68□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Tnni3kQ5GIG6 834 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Tbc1d9bQ5SVR0 1263 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 EregQ61521 162 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Tlr13Q6R5N8 991 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Arhgef19Q8BWA8 802 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Strip1Q8C079 837 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Gramd4Q8CB44 633 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Abcf2Q99LE6 628 aaKnown RBP10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Erp44Q9D1Q6 406 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Krt71Q9R0H5 524 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Ubr2Q6WKZ8 1755 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Cpb1B2RS76 415 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Scgb2b19J3QM75 112 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Prl2c2P04095 224 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Actn1Q7TPR4 892 aaKnown RBP10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Olfr832Q7TRG9 312 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Sumf1Q8R0F3 372 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Gkap1Q9JMB0 366 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 EvplQ9D952 2035 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Zmym2Q9CU65 1376 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Ncf2O70145 525 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Setd4P58467 439 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Lig3P97386 1015 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Chrna5Q2MKA5 467 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Nhej1Q3KNJ2 295 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Lrrn2Q6PHP6 730 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Bicd1Q8BR07 835 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Ccdc186Q8C9S4 917 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 CnstQ8CBC4 711 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Ctage5Q8R311 779 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Azi2Q9QYP6 405 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Cyp2ab1S4R196 498 aa10.67□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 1700003F12RikA2AKE5 210 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Sp4Q62445 782 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 PigsQ6PD26 555 aaKnown RBP10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Cracr2bQ80ZJ8 394 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Ccdc113Q8C5T8 377 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Hyou1Q9JKR6 999 aaKnown RBP10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Add1Q9QYC0 735 aaKnown RBP10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Gfpt2Q9Z2Z9 682 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Arhgap33Q80YF9 1305 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Vmn2r71L7N2D8 855 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Ctnnd1P30999 938 aaKnown RBP10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 GssP51855 474 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 PtgdrP70263 357 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Sox13Q04891 613 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Dpcr1Q3TNW5 500 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 ItgadQ3V0T4 1168 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Depdc1bQ8BH88 529 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Cog5Q8C0L8 829 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Slc51aQ8R000 340 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Alpk1Q9CXB8 1231 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Prl2c5Q9JLV9 222 aa10.66□□□□□ -0.7
Pcdh1-201ENSMUST00000057185 Dnajc7Q9QYI3 494 aa10.66□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 23.5 ms