RNA–Protein interactions for RNA: ENSMUST00000048274.10

Ttc39b-202, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ttc39b, Length 1,804 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-202ENSMUST00000048274 Gga2Q6P5E6 603 aa17.77■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Q6PD19 689 aa17.77■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Bsdc1Q80Y55 427 aa17.77■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Srp68Q8BMA6 625 aaKnown RBP17.77■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Cc2d1bQ8BRN9 848 aa17.77■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Usp27Q8CEG8 438 aa17.77■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Pak2Q8CIN4 524 aa17.77■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Kiaa0319lQ8K135 1048 aa17.77■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Alg1Q921Q3 482 aa17.77■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Ccdc105Q9D4K7 499 aa17.77■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 D1Pas1P16381 660 aa17.76■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Lmnb2P21619 596 aaKnown RBP17.76■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Cdc25aP48964 514 aa17.76■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Acbd5Q5XG73 508 aa17.76■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Def6Q8C2K1 630 aa17.76■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Eif3hQ91WK2 352 aaKnown RBP17.76■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Nfu1Q9QZ23 255 aa17.76■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Gm5737A0A140LI11 423 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Men1O88559 611 aaKnown RBP17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Mx1P09922 631 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Gngt1Q61012 74 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 DaglaQ6WQJ1 1044 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Baiap3Q80TT2 1134 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Naa15Q80UM3 865 aaKnown RBP17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Thap3Q8BJ25 218 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Bbs7Q8K2G4 715 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Smc6Q924W5 1097 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Mzb1Q9D8I1 188 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Fmnl1Q9JL26 1094 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Btbd18A0A0A6YY25 723 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Vmn2r79E9Q067 851 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Lrrc32G3XA59 663 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Akr1b10G5E895 316 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Rfpl4bJ3QPR6 266 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Pja1O55176 578 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Becn2P0DM65 447 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Spout1Q3UHX9 385 aaKnown RBP17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Arid3aQ62431 601 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 GartQ64737 1010 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Exoc3Q6KAR6 755 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Clca4aQ6Q473 924 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Slc51bQ80WK2 128 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Tmx4Q8C0L0 335 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Mtmr4Q91XS1 1190 aa17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Tjp2Q9Z0U1 1167 aaKnown RBP17.75■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Zfp646Q6NV66 1788 aa17.74■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Gm30191A0A0U1RNT7 187 aa17.74■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Tnnc1P19123 161 aa17.74■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Rgs9bpQ148R9 237 aa17.74■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Nhej1Q3KNJ2 295 aa17.74■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Krt9Q6RHW0 743 aa17.74■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Atxn2lQ7TQH0 1049 aaKnown RBP17.74■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Rexo1Q7TT28 1213 aa17.74■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 AagabQ8R2R3 316 aa17.74■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Aipl1Q924K1 328 aa17.74■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Lpin2Q99PI5 893 aa17.74■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Kif17Q99PW8 1038 aa17.74■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Mxra8Q9DBV4 442 aa17.74■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Tex21Q9R0U9 575 aa17.74■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Dock2Q8C3J5 1828 aa17.74■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Pitpnm2Q6ZPQ6 1335 aa17.73■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Mmp15O54732 657 aa17.73■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Orc4O88708 433 aa17.73■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Trim43cP86449 446 aa17.73■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Fam178bQ24JP3 464 aa17.73■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Ell2Q3UKU1 639 aa17.73■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Znf827Q505G8 1078 aa17.73■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Ncapg2Q6DFV1 1138 aa17.73■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Spag7Q7TNE3 227 aaKnown RBP17.73■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Q8BWG4 1187 aa17.73■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Erp44Q9D1Q6 406 aa17.73■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Arl2bpQ9D385 163 aa17.73■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Ccdc89Q9DA73 370 aa17.73■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Sertad2Q9JJG5 309 aa17.73■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Sertad1Q9JL10 236 aa17.73■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 C2cd2E9Q3C1 696 aa17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 A430078G23RikE9Q7Y4 484 aa17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Nsun7Q14AW5 724 aa17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Nr1d1Q3UV55 615 aa17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Git1Q68FF6 770 aa17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Krt42Q6IFX2 452 aa17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Rufy1Q8BIJ7 712 aa17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 NkrfQ8BY02 690 aaKnown RBP17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 WdpcpQ8C456 722 aa17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Lrrc41Q8K1C9 807 aa17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Ccdc43Q9CR29 222 aaKnown RBP17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 CenphQ9QYM8 241 aa17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Klra10Q9R1G6 266 aa17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Hspa9P38647 679 aaKnown RBP17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Gad1P48318 593 aa17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Phactr1Q2M3X8 580 aa17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Nlrp4cQ3TKR3 982 aa17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Ankrd13cQ3UX43 541 aa17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Slc13a4Q8BZ82 625 aa17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 GanQ8CA72 597 aa17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Onecut3Q8K557 490 aa17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 1700020D05RikQ99PB1 294 aa17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Klrc1Q9Z202 244 aa17.72■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 ErmardE9Q048 622 aa17.71■□□□□ 0.43
Ttc39b-202ENSMUST00000048274 Actn4P57780 912 aaKnown RBP17.71■□□□□ 0.43
Retrieved 100 of 22,080 RNA–protein pairs in 47.6 ms