RNA–Protein interactions for RNA: ENSMUST00000023206.13

Ercc4-201, Transcript of DNA repair endonuclease XPF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc4, Length 3,480 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc4-201ENSMUST00000023206 Ttll4Q80UG8 1193 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Aipl1Q924K1 328 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Arfgap2Q99K28 520 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Ankrd63A2ARS0 390 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Olfr310B2RVZ1 332 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Wdr72D3YYM4 1114 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Zfp408H7BX78 710 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Kif5aP33175 1027 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Uhmk1P97343 419 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Cep126Q0VBV7 1103 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Cacna2d4Q5RJF7 1116 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Il17raQ60943 864 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Hdac4Q6NZM9 1076 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Gigyf2Q6Y7W8 1291 aaKnown RBP13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Fermt2Q8CIB5 680 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Champ1Q8K327 802 aaKnown RBP13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 MlphQ91V27 590 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Cabp7Q91ZM8 215 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 RpainQ9CWY9 219 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Cxcl11Q9JHH5 100 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Mfsd4b4J3QNS5 503 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Cpsf2O35218 782 aaKnown RBP13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Kcna1P16388 495 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Znf827Q505G8 1078 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Lrrn2Q6PHP6 730 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Mxd3Q80US8 206 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Bank1Q80VH0 783 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Cplx3Q8R1B5 158 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Calml3Q9D6P8 149 aa13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Pacsin2Q9WVE8 486 aaKnown RBP13.16□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Tmem132bF7BAB2 1078 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Men1O88559 611 aaKnown RBP13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Foxn3Q499D0 457 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Gbp4Q61107 620 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Shc3Q61120 474 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Pacsin1Q61644 441 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Bap1Q99PU7 728 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Git2Q9JLQ2 708 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Gm1993A6X8I0 212 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Gm7347D3YYI9 267 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 SlxD3Z347 212 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Mroh9G5E8L9 891 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Emc10Q3TAS6 258 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Krt14Q61781 484 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Rbm12b2Q66JV4 834 aaKnown RBP13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Srp68Q8BMA6 625 aaKnown RBP13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Cc2d1bQ8BRN9 848 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Ptpn12P35831 775 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Flt3Q00342 1000 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Acsbg2Q2XU92 667 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Sf3b2Q3UJB0 878 aaKnown RBP13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Ddx42Q810A7 929 aaKnown RBP13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Ldlrap1Q8C142 308 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Olfr805Q8VFI4 319 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Q91WD4 421 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Ndufv1Q91YT0 464 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Arl10Q9QXJ4 243 aa13.15□□□□□ -0.3
Ercc4-201ENSMUST00000023206 Gm15262A0A140LIQ5 728 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Calm1P0DP26 149 aaKnown RBP13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Calm2P0DP27 149 aaKnown RBP13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Calm3P0DP28 149 aaKnown RBP13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Slurp2P0DP59 97 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Gad1P48318 593 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Dab2P98078 766 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Sema4bQ62179 823 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 CutaQ9CQ89 177 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Haus2Q9CQS9 234 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Pkd2l2Q9JLG4 621 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 AdnpQ9Z103 1108 aaKnown RBP13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Psma7Q9Z2U0 248 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Zfy1P10925 782 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Man1a2P39098 641 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Ddr1Q03146 911 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 DSCC1Q14AI0 399 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 MlxipQ2VPU4 917 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Ddb1Q3U1J4 1140 aaKnown RBP13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Cul5Q9D5V5 780 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 NesQ6P5H2 1864 aaKnown RBP13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Gm7356A0A087WSA6 508 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Rps6ka1P18653 724 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Ftl1P29391 183 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Hcls1P49710 486 aaKnown RBP13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 AdkP55264 361 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Git1Q68FF6 770 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Gimap8Q75N62 688 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 HlfQ8BW74 295 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Bag2Q91YN9 210 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 IqcdQ9D3V1 458 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Noa1Q9JJG9 693 aaKnown RBP13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Plcb1Q9Z1B3 1216 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Lgr5Q9Z1P4 907 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Sept3Q9Z1S5 350 aa13.14□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Zfp142G5E869 1843 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Kif5cP28738 956 aaKnown RBP13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Zfp957Q3UT76 567 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Aggf1Q7TN31 711 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 E330017A01RikQ8BU47 192 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Abcf3Q8K268 709 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Eps8l1Q8R5F8 716 aa13.13□□□□□ -0.31
Ercc4-201ENSMUST00000023206 Psmd2Q8VDM4 908 aa13.13□□□□□ -0.31
Retrieved 100 of 22,080 RNA–protein pairs in 19.2 ms