RNA–Protein interactions for RNA: ENSMUST00000001147.4

Col6a1-201, Transcript of Collagen alpha-1(VI) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col6a1, Length 4,100 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1-201ENSMUST00000001147 MymkQ9D1N4 221 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Mss51Q9D5Z5 446 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Gm10110D3Z5M2 615 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Pola2P33611 600 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ifnar1P33896 590 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Rfc1P35601 1131 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 PltpP55065 493 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Setd4P58467 439 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Tnni3kQ5GIG6 834 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 EsrrbQ61539 433 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Llgl1Q80Y17 1036 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Sf3b3Q921M3 1217 aaKnown RBP10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Golph3Q9CRA5 298 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Mcur1Q9CXD6 340 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Gfpt2Q9Z2Z9 682 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 C5P06684 1680 aa10.38□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Map3k15A2AQW0 1331 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Aox3G3X982 1335 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Psmd14O35593 310 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Pgrmc1O55022 195 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Tlr8P58682 1032 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Rhbdl3P58873 404 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 PtgdrP70263 357 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Rpusd2Q149F1 553 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Olfr832Q7TRG9 312 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Naa25Q8BWZ3 972 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Setdb2Q8C267 713 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 RadxQ8C779 850 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Lsm14bQ8CGC4 385 aaKnown RBP10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ttll1Q91V51 423 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 MlxiplQ99MZ3 864 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 4931408C20RikE9PWP9 1381 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Spata18Q0P557 537 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Nlrx1Q3TL44 975 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Hoxa13Q62424 386 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 SpopQ6ZWS8 374 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Tmem39aQ9CYC3 486 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Cfap57Q9D180 1249 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Sept3Q9Z1S5 350 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Foxn2E9Q7L6 429 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Clcn6O35454 870 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 MlxipQ2VPU4 917 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Trim43aQ3TL54 445 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ccdc51Q3URS9 406 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ehbp1Q69ZW3 1231 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Adck2Q6NSR3 617 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Wdr44Q6NVE8 915 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Lin9Q8C735 542 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Dr1Q91WV0 176 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Pstpip2Q99M15 334 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ric1Q69ZJ7 1422 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ddx60E9PZQ1 1711 aa10.37□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Rasal2E9PW37 1286 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Gm3893E9Q1I1 302 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ctnnd1P30999 938 aaKnown RBP10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Fhdc1Q3ULZ2 1149 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Nucks1Q80XU3 234 aaKnown RBP10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Tor4aQ8BH02 426 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Rassf10Q8BL43 508 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Acbd3Q8BMP6 525 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Rbm41Q8JZV4 413 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 E2f4Q8R0K9 410 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 SncbQ91ZZ3 133 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Tbx18Q9EPZ6 613 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ddx25Q9QY15 484 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Add1Q9QYC0 735 aaKnown RBP10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Lgr5Q9Z1P4 907 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Mon2Q80TL7 1715 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Kcnh2O35219 1162 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 GssP51855 474 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Shc3Q61120 474 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Lrrn2Q6PHP6 730 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Prdm4Q80V63 803 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Gm6121L7MUF1 212 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 IkbkbO88351 757 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Kif5cP28738 956 aaKnown RBP10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Atp8a1P70704 1164 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Nap1l4Q78ZA7 375 aaKnown RBP10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Actn1Q7TPR4 892 aaKnown RBP10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 SowahdQ8BY98 327 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Spata16Q8C636 571 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Nup58Q8R332 587 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Slc44a4Q91VA1 707 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 NalcnQ8BXR5 1738 aa10.36□□□□□ -0.75
Col6a1-201ENSMUST00000001147 D430041D05RikF6ZGR6 1678 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Pcdha4O88689 947 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 AgtP11859 477 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 AsphQ8BSY0 741 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Riox2Q8CD15 465 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Amhr2Q8K592 568 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Olr1Q9EQ09 363 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Hyou1Q9JKR6 999 aaKnown RBP10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Slfn1Q9Z0I7 337 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 A0A286YCQ6 122 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Ercc5P35689 1170 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Stat4P42228 749 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Jdp2P97875 163 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Tmem35bQ3U0Y2 150 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 Pnma5Q5DTT8 618 aa10.35□□□□□ -0.75
Col6a1-201ENSMUST00000001147 P4ha1Q60715 534 aa10.35□□□□□ -0.75
Retrieved 100 of 22,080 RNA–protein pairs in 24.9 ms