RNA–Protein interactions for RNA: YOR018W

ROD1, Transcript of Alpha-arrestin involved in ubiquitin-dependent endocytosis, yeastyeast

Gene ROD1, Length 2,514 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ROD1YOR018W HXT7P39004 570 aa3.72□□□□□ -1.81
ROD1YOR018W YIL108WP40483 696 aaKnown RBP3.72□□□□□ -1.81
ROD1YOR018W TIM54P47045 478 aa3.72□□□□□ -1.81
ROD1YOR018W PET130P47065 347 aa3.72□□□□□ -1.81
ROD1YOR018W UPF3P48412 387 aaKnown RBP3.72□□□□□ -1.81
ROD1YOR018W SHY1P53266 389 aa3.72□□□□□ -1.81
ROD1YOR018W NCE103P53615 221 aa3.72□□□□□ -1.81
ROD1YOR018W CLP1Q08685 445 aaPredicted RBP3.72□□□□□ -1.81
ROD1YOR018W JLP1Q12358 412 aa3.72□□□□□ -1.81
ROD1YOR018W CAN1P04817 590 aa3.71□□□□□ -1.82
ROD1YOR018W ARG3P05150 338 aa3.71□□□□□ -1.82
ROD1YOR018W PHO81P17442 1178 aa3.71□□□□□ -1.82
ROD1YOR018W SGV1P23293 657 aaKnown RBP3.71□□□□□ -1.82
ROD1YOR018W DBR1P24309 405 aaKnown RBP3.71□□□□□ -1.82
ROD1YOR018W LYP1P32487 611 aa3.71□□□□□ -1.82
ROD1YOR018W MEI5P32489 222 aa3.71□□□□□ -1.82
ROD1YOR018W TYE7P33122 291 aaPredicted RBP3.71□□□□□ -1.82
ROD1YOR018W HES1P35843 434 aa3.71□□□□□ -1.82
ROD1YOR018W YHR127WP38833 243 aaKnown RBP3.71□□□□□ -1.82
ROD1YOR018W ALG5P40350 334 aa3.71□□□□□ -1.82
ROD1YOR018W ARF3P40994 183 aaRIP-Chip data3.71□□□□□ -1.82not detected
ROD1YOR018W ZIM17P42844 174 aa3.71□□□□□ -1.82
ROD1YOR018W FMP32P43557 207 aa3.71□□□□□ -1.82
ROD1YOR018W NOP9P47077 666 aaKnown RBP3.71□□□□□ -1.82
ROD1YOR018W BIO3P50277 480 aa3.71□□□□□ -1.82
ROD1YOR018W YGR015CP53208 328 aa3.71□□□□□ -1.82
ROD1YOR018W MPS1P54199 764 aa3.71□□□□□ -1.82
ROD1YOR018W MSC1Q03104 513 aa3.71□□□□□ -1.82
ROD1YOR018W YML119WQ03208 357 aa3.71□□□□□ -1.82
ROD1YOR018W GTB1Q04924 702 aa3.71□□□□□ -1.82
ROD1YOR018W ATG26Q06321 1198 aa3.71□□□□□ -1.82
ROD1YOR018W CDA1Q06702 301 aa3.71□□□□□ -1.82
ROD1YOR018W SNF8Q12483 233 aa3.71□□□□□ -1.82
ROD1YOR018W ATP2P00830 511 aaKnown RBP3.71□□□□□ -1.82
ROD1YOR018W YKR104WP0CE69 306 aa3.71□□□□□ -1.82
ROD1YOR018W OCA4P25366 362 aa3.71□□□□□ -1.82
ROD1YOR018W FUN30P31380 1131 aa3.71□□□□□ -1.82
ROD1YOR018W NGG1P32494 702 aa3.71□□□□□ -1.82
ROD1YOR018W CBF5P33322 483 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
ROD1YOR018W PEX6P33760 1030 aa3.71□□□□□ -1.82
ROD1YOR018W RMA1P36001 430 aaKnown RBP3.71□□□□□ -1.82
ROD1YOR018W SRX1P36077 127 aa3.71□□□□□ -1.82
ROD1YOR018W BET3P36149 193 aa3.71□□□□□ -1.82
ROD1YOR018W MRPL17P36528 281 aa3.71□□□□□ -1.82
ROD1YOR018W RRP3P38712 501 aaKnown RBP3.71□□□□□ -1.82
ROD1YOR018W ARN1P38731 627 aa3.71□□□□□ -1.82
ROD1YOR018W MET30P39014 640 aa3.71□□□□□ -1.82
ROD1YOR018W FRT2P39734 528 aa3.71□□□□□ -1.82
ROD1YOR018W EMP65P40085 556 aa3.71□□□□□ -1.82
ROD1YOR018W MPH1P40562 993 aa3.71□□□□□ -1.82
ROD1YOR018W GCD14P46959 383 aaPredicted RBP3.71□□□□□ -1.82
ROD1YOR018W PMT4P46971 762 aa3.71□□□□□ -1.82
ROD1YOR018W NUP84P52891 726 aa3.71□□□□□ -1.82
ROD1YOR018W NPL3Q01560 414 aaKnown RBP RIP-Chip data3.71□□□□□ -1.82not detected
ROD1YOR018W DYN3Q04949 312 aa3.71□□□□□ -1.82
ROD1YOR018W REH1Q06709 432 aa3.71□□□□□ -1.82
ROD1YOR018W AHA1Q12449 350 aaKnown RBP3.71□□□□□ -1.82
ROD1YOR018W MSB2P32334 1306 aa3.7□□□□□ -1.82
ROD1YOR018W ATO2P32907 282 aa3.7□□□□□ -1.82
ROD1YOR018W HXT16P47185 567 aa3.7□□□□□ -1.82
ROD1YOR018W COQ5P49017 307 aa3.7□□□□□ -1.82
ROD1YOR018W COS12P53053 380 aa3.7□□□□□ -1.82
ROD1YOR018W SCW11P53189 542 aa3.7□□□□□ -1.82
ROD1YOR018W ERP6P53198 216 aa3.7□□□□□ -1.82
ROD1YOR018W FHN1P53279 174 aa3.7□□□□□ -1.82
ROD1YOR018W YMR010WQ03687 405 aa3.7□□□□□ -1.82
ROD1YOR018W YDR124WQ04608 324 aa3.7□□□□□ -1.82
ROD1YOR018W YFT2Q06676 274 aa3.7□□□□□ -1.82
ROD1YOR018W VPS68Q12016 184 aa3.7□□□□□ -1.82
ROD1YOR018W MLH3Q12083 715 aa3.7□□□□□ -1.82
ROD1YOR018W YOR012WQ12351 137 aa3.7□□□□□ -1.82
ROD1YOR018W TIM9O74700 87 aa3.7□□□□□ -1.82
ROD1YOR018W STE3P06783 470 aa3.7□□□□□ -1.82
ROD1YOR018W SBA1P28707 216 aaKnown RBP3.7□□□□□ -1.82
ROD1YOR018W RPF2P36160 344 aaKnown RBP3.7□□□□□ -1.82
ROD1YOR018W YPT35P38815 214 aaKnown RBP3.7□□□□□ -1.82
ROD1YOR018W CEM1P39525 442 aa3.7□□□□□ -1.82
ROD1YOR018W YJL070CP40361 888 aa3.7□□□□□ -1.82
ROD1YOR018W YGR016WP53209 190 aa3.7□□□□□ -1.82
ROD1YOR018W CSL4P53859 292 aaPredicted RBP3.7□□□□□ -1.82
ROD1YOR018W EAF1Q06337 982 aa3.7□□□□□ -1.82
ROD1YOR018W YOL131WQ08270 108 aa3.7□□□□□ -1.82
ROD1YOR018W SNX3Q08826 162 aaKnown RBP3.7□□□□□ -1.82
ROD1YOR018W TGL5Q12043 749 aa3.7□□□□□ -1.82
ROD1YOR018W YLR111WQ12528 110 aa3.7□□□□□ -1.82
ROD1YOR018W RAS2P01120 322 aaKnown RBP3.69□□□□□ -1.82
ROD1YOR018W ALG7P07286 448 aa3.69□□□□□ -1.82
ROD1YOR018W PPH21P23594 369 aa3.69□□□□□ -1.82
ROD1YOR018W RNQ1P25367 405 aa3.69□□□□□ -1.82
ROD1YOR018W CRM1P30822 1084 aaKnown RBP3.69□□□□□ -1.82
ROD1YOR018W CSE1P33307 960 aa3.69□□□□□ -1.82
ROD1YOR018W RPS1AP33442 255 aaKnown RBP3.69□□□□□ -1.82
ROD1YOR018W BMT2P38278 337 aa3.69□□□□□ -1.82
ROD1YOR018W COS111P38308 924 aa3.69□□□□□ -1.82
ROD1YOR018W ECM10P39987 644 aa3.69□□□□□ -1.82
ROD1YOR018W GIM4P40005 111 aaKnown RBP3.69□□□□□ -1.82
ROD1YOR018W YEN1P40028 759 aa3.69□□□□□ -1.82
ROD1YOR018W GUS1P46655 708 aaKnown RBP RIP-Chip data3.69□□□□□ -1.82not detected
ROD1YOR018W YJR149WP47177 404 aa3.69□□□□□ -1.82
ROD1YOR018W MUP1P50276 574 aa3.69□□□□□ -1.82
Retrieved 100 of 5,963 RNA–protein pairs in 17.7 ms