RNA–Protein interactions for RNA: YNL025C

SSN8, Transcript of Cyclin-like component of the RNA polymerase II holoenzyme, yeastyeast

Gene SSN8, Length 972 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSN8YNL025C YMR102CQ03177 834 aa3.03□□□□□ -1.92
SSN8YNL025C RCR2Q03446 210 aaKnown RBP3.03□□□□□ -1.92
SSN8YNL025C YMR226CQ05016 267 aaKnown RBP3.03□□□□□ -1.92
SSN8YNL025C RBS1Q05672 457 aaKnown RBP3.03□□□□□ -1.92
SSN8YNL025C NDL1Q06568 189 aa3.03□□□□□ -1.92
SSN8YNL025C SHS1Q07657 551 aa3.03□□□□□ -1.92
SSN8YNL025C YLL007CQ07799 665 aa3.03□□□□□ -1.92
SSN8YNL025C NRT1Q08485 598 aa3.03□□□□□ -1.92
SSN8YNL025C RKM1Q08961 583 aaPredicted RBP3.03□□□□□ -1.92
SSN8YNL025C YPL272CQ08984 517 aa3.03□□□□□ -1.92
SSN8YNL025C VIK1Q12045 647 aa3.03□□□□□ -1.92
SSN8YNL025C BTS1Q12051 335 aa3.03□□□□□ -1.92
SSN8YNL025C MDM20Q12387 796 aaKnown RBP3.03□□□□□ -1.92
SSN8YNL025C POM34Q12445 299 aa3.03□□□□□ -1.92
SSN8YNL025C BRR1Q99177 341 aaPredicted RBP3.03□□□□□ -1.92
SSN8YNL025C MTR10Q99189 972 aa3.03□□□□□ -1.92
SSN8YNL025C HRP1Q99383 534 aaKnown RBP3.03□□□□□ -1.92
SSN8YNL025C HXK2P04807 486 aaKnown RBP3.02□□□□□ -1.93
SSN8YNL025C ARG81P05085 880 aa3.02□□□□□ -1.93
SSN8YNL025C PRB1P09232 635 aa3.02□□□□□ -1.93
SSN8YNL025C ERG11P10614 530 aa3.02□□□□□ -1.93
SSN8YNL025C CLN1P20437 546 aa3.02□□□□□ -1.93
SSN8YNL025C MEK1P24719 497 aaPredicted RBP3.02□□□□□ -1.93
SSN8YNL025C ECM25P32525 599 aa3.02□□□□□ -1.93
SSN8YNL025C YME1P32795 747 aa3.02□□□□□ -1.93
SSN8YNL025C YBR144CP34215 104 aa3.02□□□□□ -1.93
SSN8YNL025C OCT1P35999 772 aa3.02□□□□□ -1.93
SSN8YNL025C YKL071WP36086 256 aa3.02□□□□□ -1.93
SSN8YNL025C SWC5P38326 303 aa3.02□□□□□ -1.93
SSN8YNL025C YMR262WP38430 313 aa3.02□□□□□ -1.93
SSN8YNL025C MSR1P38714 643 aa3.02□□□□□ -1.93
SSN8YNL025C SER3P40054 469 aa3.02□□□□□ -1.93
SSN8YNL025C BUR6P40096 142 aa3.02□□□□□ -1.93
SSN8YNL025C COS12P53053 380 aa3.02□□□□□ -1.93
SSN8YNL025C MPS2P53159 387 aa3.02□□□□□ -1.93
SSN8YNL025C YGR126WP53274 230 aa3.02□□□□□ -1.93
SSN8YNL025C RTC4P53850 401 aa3.02□□□□□ -1.93
SSN8YNL025C EFM6P53970 246 aa3.02□□□□□ -1.93
SSN8YNL025C UTP6Q02354 440 aaKnown RBP3.02□□□□□ -1.93
SSN8YNL025C MFM1Q02783 413 aa3.02□□□□□ -1.93
SSN8YNL025C YDR179W-AQ03983 463 aa3.02□□□□□ -1.93
SSN8YNL025C RRG8Q06109 277 aa3.02□□□□□ -1.93
SSN8YNL025C GET4Q12125 312 aa3.02□□□□□ -1.93
SSN8YNL025C GIS3Q12418 502 aa3.02□□□□□ -1.93
SSN8YNL025C YBR255C-AQ3E776 120 aa3.02□□□□□ -1.93
SSN8YNL025C RTC1Q08281 1341 aa3.01□□□□□ -1.93
SSN8YNL025C LEU4P06208 619 aaKnown RBP3.01□□□□□ -1.93
SSN8YNL025C SPS4P09937 338 aa3.01□□□□□ -1.93
SSN8YNL025C RAP1P11938 827 aa3.01□□□□□ -1.93
SSN8YNL025C YAK1P14680 807 aa3.01□□□□□ -1.93
SSN8YNL025C ART10P18634 518 aaKnown RBP3.01□□□□□ -1.93
SSN8YNL025C SAG1P20840 650 aa3.01□□□□□ -1.93
SSN8YNL025C SPE2P21182 396 aa3.01□□□□□ -1.93
SSN8YNL025C DAL81P21657 970 aa3.01□□□□□ -1.93
SSN8YNL025C PDE1P22434 369 aa3.01□□□□□ -1.93
SSN8YNL025C PPH22P23595 377 aa3.01□□□□□ -1.93
SSN8YNL025C RVS161P25343 265 aaKnown RBP3.01□□□□□ -1.93
SSN8YNL025C YCL068CP25593 260 aa3.01□□□□□ -1.93
SSN8YNL025C FUB1P25659 250 aa3.01□□□□□ -1.93
SSN8YNL025C PRR1P28708 518 aa3.01□□□□□ -1.93
SSN8YNL025C BEM1P29366 551 aa3.01□□□□□ -1.93
SSN8YNL025C PRE2P30656 287 aaKnown RBP3.01□□□□□ -1.93
SSN8YNL025C ZIP1P31111 875 aa3.01□□□□□ -1.93
SSN8YNL025C RIM1P32445 135 aaKnown RBP3.01□□□□□ -1.93
SSN8YNL025C ARO4P32449 370 aaKnown RBP3.01□□□□□ -1.93
SSN8YNL025C GSH1P32477 678 aa3.01□□□□□ -1.93
SSN8YNL025C HIR2P32480 875 aa3.01□□□□□ -1.93
SSN8YNL025C SKG6P32900 734 aaPredicted RBP3.01□□□□□ -1.93
SSN8YNL025C PTR2P32901 601 aa3.01□□□□□ -1.93
SSN8YNL025C PTK1P36002 662 aaPredicted RBP3.01□□□□□ -1.93
SSN8YNL025C RSM22P36056 628 aa3.01□□□□□ -1.93
SSN8YNL025C GMH1P36125 273 aa3.01□□□□□ -1.93
SSN8YNL025C AIM29P36154 155 aa3.01□□□□□ -1.93
SSN8YNL025C GEX2P36173 615 aa3.01□□□□□ -1.93
SSN8YNL025C ARA1P38115 344 aa3.01□□□□□ -1.93
SSN8YNL025C MAL32P38158 584 aa3.01□□□□□ -1.93
SSN8YNL025C KAP104P38217 918 aaKnown RBP3.01□□□□□ -1.93
SSN8YNL025C DIA4P38705 446 aaPredicted RBP3.01□□□□□ -1.93
SSN8YNL025C YHR182WP38870 785 aa3.01□□□□□ -1.93
SSN8YNL025C EGD2P38879 174 aaKnown RBP3.01□□□□□ -1.93
SSN8YNL025C FAD1P38913 306 aa3.01□□□□□ -1.93
SSN8YNL025C YMR147WP40218 223 aaKnown RBP3.01□□□□□ -1.93
SSN8YNL025C ATM1P40416 690 aa3.01□□□□□ -1.93
SSN8YNL025C VHS2P40463 436 aa3.01□□□□□ -1.93
SSN8YNL025C SEC24P40482 926 aaKnown RBP3.01□□□□□ -1.93
SSN8YNL025C MAF1P41910 395 aa3.01□□□□□ -1.93
SSN8YNL025C BNA6P43619 295 aa3.01□□□□□ -1.93
SSN8YNL025C NET1P47035 1189 aa3.01□□□□□ -1.93
SSN8YNL025C UBX6P47049 396 aa3.01□□□□□ -1.93
SSN8YNL025C ABM1P47146 123 aa3.01□□□□□ -1.93
SSN8YNL025C TOM22P49334 152 aa3.01□□□□□ -1.93
SSN8YNL025C IMD4P50094 524 aaKnown RBP3.01□□□□□ -1.93
SSN8YNL025C YGL036WP53185 909 aaPredicted RBP3.01□□□□□ -1.93
SSN8YNL025C CAF130P53280 1122 aaPredicted RBP3.01□□□□□ -1.93
SSN8YNL025C ZPR1P53303 486 aaKnown RBP3.01□□□□□ -1.93
SSN8YNL025C RTT102P53330 157 aa3.01□□□□□ -1.93
SSN8YNL025C MAL12P53341 584 aa3.01□□□□□ -1.93
SSN8YNL025C IPI3P53877 555 aa3.01□□□□□ -1.93
SSN8YNL025C YNL146WP53906 100 aa3.01□□□□□ -1.93
SSN8YNL025C YDR541CQ03049 344 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 18.9 ms