RNA–Protein interactions for RNA: YLR394W

CST9, Transcript of SUMO E3 ligase, yeastyeast

Gene CST9, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CST9YLR394W VTH1P40438 1549 aa3.24□□□□□ -1.89
CST9YLR394W VTH2P40890 1549 aa3.24□□□□□ -1.89
CST9YLR394W MES1P00958 751 aaKnown RBP3.24□□□□□ -1.89
CST9YLR394W RPL15AP05748 204 aaKnown RBP3.24□□□□□ -1.89
CST9YLR394W NPL6P32832 435 aa3.24□□□□□ -1.89
CST9YLR394W UTP9P38882 575 aaKnown RBP3.24□□□□□ -1.89
CST9YLR394W LSM5P40089 93 aaKnown RBP3.24□□□□□ -1.89
CST9YLR394W SYG1P40528 902 aa3.24□□□□□ -1.89
CST9YLR394W HXT14P42833 540 aa3.24□□□□□ -1.89
CST9YLR394W SRB7P47822 140 aa3.24□□□□□ -1.89
CST9YLR394W RPA49Q01080 415 aaPredicted RBP3.24□□□□□ -1.89
CST9YLR394W IVY1Q04934 453 aa3.24□□□□□ -1.89
CST9YLR394W SCW10Q04951 389 aa3.24□□□□□ -1.89
CST9YLR394W YLR287CQ05881 355 aa3.24□□□□□ -1.89
CST9YLR394W POL1P13382 1468 aa3.23□□□□□ -1.89
CST9YLR394W GLK1P17709 500 aaKnown RBP3.23□□□□□ -1.89
CST9YLR394W PAP1P29468 568 aaKnown RBP3.23□□□□□ -1.89
CST9YLR394W HXT3P32466 567 aaKnown RBP3.23□□□□□ -1.89
CST9YLR394W SAS3P34218 831 aa3.23□□□□□ -1.89
CST9YLR394W DHH1P39517 506 aaKnown RBP3.23□□□□□ -1.89
CST9YLR394W RPR2P40571 144 aa3.23□□□□□ -1.89
CST9YLR394W YGL108CP53139 140 aa3.23□□□□□ -1.89
CST9YLR394W YDL009CQ12210 107 aa3.23□□□□□ -1.89
CST9YLR394W ISN1Q99312 450 aa3.23□□□□□ -1.89
CST9YLR394W SPO14P36126 1683 aa3.23□□□□□ -1.89
CST9YLR394W TSC11P40061 1430 aa3.23□□□□□ -1.89
CST9YLR394W YOR1P53049 1477 aa3.23□□□□□ -1.89
CST9YLR394W STU1P38198 1513 aa3.22□□□□□ -1.89
CST9YLR394W SNT1P25357 1226 aa3.22□□□□□ -1.89
CST9YLR394W THI2P38141 450 aa3.22□□□□□ -1.89
CST9YLR394W RTT107P38850 1070 aa3.22□□□□□ -1.89
CST9YLR394W HAT2P39984 401 aa3.22□□□□□ -1.89
CST9YLR394W ARK1P53974 638 aa3.22□□□□□ -1.89
CST9YLR394W YMR155WQ03795 547 aa3.22□□□□□ -1.89
CST9YLR394W AYT1Q12226 474 aa3.22□□□□□ -1.89
CST9YLR394W SCM3Q12334 223 aa3.22□□□□□ -1.89
CST9YLR394W SMC4Q12267 1418 aa3.22□□□□□ -1.89
CST9YLR394W PHO2P07269 559 aa3.21□□□□□ -1.9
CST9YLR394W YML002WP0CF17 737 aa3.21□□□□□ -1.9
CST9YLR394W PPH22P23595 377 aa3.21□□□□□ -1.9
CST9YLR394W SPB1P25582 841 aaPredicted RBP3.21□□□□□ -1.9
CST9YLR394W FUN19P28003 413 aaPredicted RBP3.21□□□□□ -1.9
CST9YLR394W SPC110P32380 944 aa3.21□□□□□ -1.9
CST9YLR394W NDC1P32500 655 aa3.21□□□□□ -1.9
CST9YLR394W FMP46P36141 133 aaKnown RBP3.21□□□□□ -1.9
CST9YLR394W MTC4P38335 694 aaKnown RBP3.21□□□□□ -1.9
CST9YLR394W RTT101P47050 842 aa3.21□□□□□ -1.9
CST9YLR394W COS10P52924 374 aa3.21□□□□□ -1.9
CST9YLR394W YGL260WP53056 76 aa3.21□□□□□ -1.9
CST9YLR394W GPI1P53306 609 aa3.21□□□□□ -1.9
CST9YLR394W MRPL51Q06090 140 aaPredicted RBP3.21□□□□□ -1.9
CST9YLR394W YLL032CQ07834 825 aaKnown RBP RIP-Chip data3.21□□□□□ -1.9not detected
CST9YLR394W RRG1Q12167 365 aaPredicted RBP3.21□□□□□ -1.9
CST9YLR394W RAV1P47104 1357 aa3.21□□□□□ -1.9
CST9YLR394W ULS1Q08562 1619 aa3.21□□□□□ -1.9
CST9YLR394W HEM2P05373 342 aa3.2□□□□□ -1.9
CST9YLR394W ATP10P18496 279 aa3.2□□□□□ -1.9
CST9YLR394W BUB3P26449 341 aa3.2□□□□□ -1.9
CST9YLR394W YIM1P28625 365 aa3.2□□□□□ -1.9
CST9YLR394W JNM1P36224 373 aa3.2□□□□□ -1.9
CST9YLR394W KRE9P39005 276 aa3.2□□□□□ -1.9
CST9YLR394W GPD2P41911 440 aaKnown RBP3.2□□□□□ -1.9
CST9YLR394W YFR016CP43597 1233 aaKnown RBP3.2□□□□□ -1.9
CST9YLR394W YGR149WP48236 432 aa3.2□□□□□ -1.9
CST9YLR394W OCA1P50946 238 aaPredicted RBP3.2□□□□□ -1.9
CST9YLR394W ARX1Q03862 593 aaKnown RBP3.2□□□□□ -1.9
CST9YLR394W RPL3P14126 387 aaKnown RBP3.19□□□□□ -1.9
CST9YLR394W PRP16P15938 1071 aaPredicted RBP3.19□□□□□ -1.9
CST9YLR394W PTR2P32901 601 aa3.19□□□□□ -1.9
CST9YLR394W RRP3P38712 501 aaKnown RBP3.19□□□□□ -1.9
CST9YLR394W NOC2P39744 710 aaKnown RBP3.19□□□□□ -1.9
CST9YLR394W RPH1P39956 796 aa3.19□□□□□ -1.9
CST9YLR394W FAU1P40099 211 aa3.19□□□□□ -1.9
CST9YLR394W SNT2P53127 1403 aa3.19□□□□□ -1.9
CST9YLR394W YGL082WP53155 381 aa3.19□□□□□ -1.9
CST9YLR394W YML133CQ03099 1374 aa3.19□□□□□ -1.9
CST9YLR394W YDR131CQ03899 556 aa3.19□□□□□ -1.9
CST9YLR394W ERP1Q05359 219 aaKnown RBP3.19□□□□□ -1.9
CST9YLR394W YLL067CQ07888 1374 aa3.19□□□□□ -1.9
CST9YLR394W SIL1Q08199 421 aa3.19□□□□□ -1.9
CST9YLR394W TIP41Q12199 356 aa3.19□□□□□ -1.9
CST9YLR394W LSP1Q12230 341 aaKnown RBP3.19□□□□□ -1.9
CST9YLR394W YLL066CQ99208 1374 aa3.19□□□□□ -1.9
CST9YLR394W SNQ2P32568 1501 aaKnown RBP3.19□□□□□ -1.9
CST9YLR394W MCK1P21965 375 aaKnown RBP3.19□□□□□ -1.9
CST9YLR394W RNA14P25298 677 aaKnown RBP3.19□□□□□ -1.9
CST9YLR394W NFU1P32860 256 aa3.19□□□□□ -1.9
CST9YLR394W MPE1P35728 441 aaKnown RBP3.19□□□□□ -1.9
CST9YLR394W TUL1P36096 758 aa3.19□□□□□ -1.9
CST9YLR394W YDL186WP48568 277 aa3.19□□□□□ -1.9
CST9YLR394W CRZ1P53968 678 aa3.19□□□□□ -1.9
CST9YLR394W IRC15Q02733 499 aa3.19□□□□□ -1.9
CST9YLR394W YBR298C-AQ8TGK4 73 aa3.19□□□□□ -1.9
CST9YLR394W CAR1P00812 333 aaKnown RBP3.18□□□□□ -1.9
CST9YLR394W SEC63P14906 663 aa3.18□□□□□ -1.9
CST9YLR394W MTF1P14908 341 aaKnown RBP3.18□□□□□ -1.9
CST9YLR394W RAD14P28519 371 aa3.18□□□□□ -1.9
CST9YLR394W AFG1P32317 509 aa3.18□□□□□ -1.9
CST9YLR394W AGA1P32323 725 aa3.18□□□□□ -1.9
CST9YLR394W RML2P32611 393 aa3.18□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 509.7 ms