RNA–Protein interactions for RNA: YLR378C

SEC61, Transcript of Conserved ER protein translocation channel, yeastyeast

Gene SEC61, Length 1,443 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC61YLR378C NAG1Q8TGN9 163 aa8.85□□□□□ -0.99
SEC61YLR378C LAT1P12695 482 aaKnown RBP8.84□□□□□ -0.99
SEC61YLR378C TRX3P25372 127 aa8.84□□□□□ -0.99
SEC61YLR378C PEX3P28795 441 aa8.84□□□□□ -0.99
SEC61YLR378C TFB1P32776 642 aa8.84□□□□□ -0.99
SEC61YLR378C SPO23P33757 523 aa8.84□□□□□ -0.99
SEC61YLR378C DED81P38707 554 aaKnown RBP8.84□□□□□ -0.99
SEC61YLR378C AXL2P38928 823 aa8.84□□□□□ -0.99
SEC61YLR378C GGC1P38988 300 aa8.84□□□□□ -0.99
SEC61YLR378C RIC1P40395 1056 aa8.84□□□□□ -0.99
SEC61YLR378C SNL1P40548 159 aa8.84□□□□□ -0.99
SEC61YLR378C TOM22P49334 152 aa8.84□□□□□ -0.99
SEC61YLR378C YNR068CP53754 272 aa8.84□□□□□ -0.99
SEC61YLR378C YKU80Q04437 629 aa8.84□□□□□ -0.99
SEC61YLR378C MFG1Q07684 458 aa8.84□□□□□ -0.99
SEC61YLR378C SUI3P09064 285 aaKnown RBP8.83□□□□□ -1
SEC61YLR378C RPS21AP0C0V8 87 aaKnown RBP8.83□□□□□ -1
SEC61YLR378C RPP1BP10622 106 aaKnown RBP8.83□□□□□ -1
SEC61YLR378C SNF4P12904 322 aa8.83□□□□□ -1
SEC61YLR378C ATR1P13090 542 aa8.83□□□□□ -1
SEC61YLR378C MRPL32P25348 183 aa8.83□□□□□ -1
SEC61YLR378C TRM7P38238 310 aaKnown RBP8.83□□□□□ -1
SEC61YLR378C RBG1P39729 369 aa8.83□□□□□ -1
SEC61YLR378C MTW1P39731 289 aa8.83□□□□□ -1
SEC61YLR378C ARI1P53111 347 aaKnown RBP8.83□□□□□ -1
SEC61YLR378C MUS81Q04149 632 aaPredicted RBP8.83□□□□□ -1
SEC61YLR378C GPI11Q06636 219 aa8.83□□□□□ -1
SEC61YLR378C PFK27Q12471 397 aaPredicted RBP8.83□□□□□ -1
SEC61YLR378C MHF2Q3E829 80 aa8.83□□□□□ -1
SEC61YLR378C TY2A-LR1P0C2J4 438 aa8.82□□□□□ -1
SEC61YLR378C TY2A-FP0CX61 438 aa8.82□□□□□ -1
SEC61YLR378C TY2A-GR2P0CX62 438 aa8.82□□□□□ -1
SEC61YLR378C UNG1P12887 359 aa8.82□□□□□ -1
SEC61YLR378C FBA1P14540 359 aaKnown RBP8.82□□□□□ -1
SEC61YLR378C DAP2P18962 818 aa8.82□□□□□ -1
SEC61YLR378C MSB1P21339 1137 aaKnown RBP8.82□□□□□ -1
SEC61YLR378C TY2A-CP25383 438 aa8.82□□□□□ -1
SEC61YLR378C SEC17P32602 292 aa8.82□□□□□ -1
SEC61YLR378C PET127P32606 800 aa8.82□□□□□ -1
SEC61YLR378C MDJ1P35191 511 aa8.82□□□□□ -1
SEC61YLR378C EMC3P36039 253 aa8.82□□□□□ -1
SEC61YLR378C CBP4P37267 147 aa8.82□□□□□ -1
SEC61YLR378C PDS1P40316 373 aaPredicted RBP8.82□□□□□ -1
SEC61YLR378C ELP2P42935 788 aa8.82□□□□□ -1
SEC61YLR378C AGP3P43548 558 aa8.82□□□□□ -1
SEC61YLR378C YFR020WP43600 232 aa8.82□□□□□ -1
SEC61YLR378C FAA4P47912 694 aaKnown RBP8.82□□□□□ -1
SEC61YLR378C RMR1P53060 241 aa8.82□□□□□ -1
SEC61YLR378C YPL071CQ02864 156 aa8.82□□□□□ -1
SEC61YLR378C TY2A-DR2Q03483 438 aa8.82□□□□□ -1
SEC61YLR378C ROT1Q03691 256 aa8.82□□□□□ -1
SEC61YLR378C VPS74Q06385 345 aa8.82□□□□□ -1
SEC61YLR378C YPR097WQ06839 1073 aa8.82□□□□□ -1
SEC61YLR378C YOL131WQ08270 108 aa8.82□□□□□ -1
SEC61YLR378C GYP1Q08484 637 aa8.82□□□□□ -1
SEC61YLR378C MLH3Q12083 715 aa8.82□□□□□ -1
SEC61YLR378C TY2A-BQ12260 438 aa8.82□□□□□ -1
SEC61YLR378C TY2A-OR2Q12293 438 aa8.82□□□□□ -1
SEC61YLR378C TY2A-DR1Q12392 438 aa8.82□□□□□ -1
SEC61YLR378C TY2A-OR1Q12439 438 aa8.82□□□□□ -1
SEC61YLR378C SEC39Q12745 709 aa8.82□□□□□ -1
SEC61YLR378C TY2A-DR3Q99303 438 aa8.82□□□□□ -1
SEC61YLR378C RAD7P06779 565 aa8.81□□□□□ -1
SEC61YLR378C MST1P07236 462 aa8.81□□□□□ -1
SEC61YLR378C HOM2P13663 365 aaKnown RBP8.81□□□□□ -1
SEC61YLR378C SCL1P21243 252 aaKnown RBP8.81□□□□□ -1
SEC61YLR378C DMC1P25453 334 aa8.81□□□□□ -1
SEC61YLR378C PET309P32522 965 aaPredicted RBP8.81□□□□□ -1
SEC61YLR378C RML2P32611 393 aa8.81□□□□□ -1
SEC61YLR378C SLX5P32828 619 aaKnown RBP8.81□□□□□ -1
SEC61YLR378C KKQ8P36004 724 aa8.81□□□□□ -1
SEC61YLR378C SPC34P36131 295 aa8.81□□□□□ -1
SEC61YLR378C BAT1P38891 393 aaKnown RBP8.81□□□□□ -1
SEC61YLR378C THO1P40040 218 aaKnown RBP8.81□□□□□ -1
SEC61YLR378C VHR1P40522 640 aa8.81□□□□□ -1
SEC61YLR378C MAD2P40958 196 aa8.81□□□□□ -1
SEC61YLR378C TY4A-JP47023 414 aa8.81□□□□□ -1
SEC61YLR378C MRK1P50873 501 aa8.81□□□□□ -1
SEC61YLR378C SDT1P53078 280 aa8.81□□□□□ -1
SEC61YLR378C SGF73P53165 657 aa8.81□□□□□ -1
SEC61YLR378C SWF1Q04629 336 aa8.81□□□□□ -1
SEC61YLR378C GAD1Q04792 585 aa8.81□□□□□ -1
SEC61YLR378C YOR342CQ12182 319 aa8.81□□□□□ -1
SEC61YLR378C MDM12Q92328 271 aa8.81□□□□□ -1
SEC61YLR378C LEU4P06208 619 aaKnown RBP8.8□□□□□ -1
SEC61YLR378C MRPS28P21771 286 aa8.8□□□□□ -1
SEC61YLR378C SLM5P25345 492 aaKnown RBP8.8□□□□□ -1
SEC61YLR378C CAT2P32796 670 aaKnown RBP8.8□□□□□ -1
SEC61YLR378C NTR2P36118 322 aaPredicted RBP8.8□□□□□ -1
SEC61YLR378C MRPL37P36532 105 aa8.8□□□□□ -1
SEC61YLR378C RRN10P38204 145 aa8.8□□□□□ -1
SEC61YLR378C RCK1P38622 512 aa8.8□□□□□ -1
SEC61YLR378C MNN9P39107 395 aaKnown RBP8.8□□□□□ -1
SEC61YLR378C ERV46P39727 415 aa8.8□□□□□ -1
SEC61YLR378C APQ12P40532 138 aa8.8□□□□□ -1
SEC61YLR378C AZF1P41696 914 aa8.8□□□□□ -1
SEC61YLR378C MUP1P50276 574 aa8.8□□□□□ -1
SEC61YLR378C YDR239CQ03780 787 aa8.8□□□□□ -1
SEC61YLR378C ATG38Q05789 226 aaKnown RBP8.8□□□□□ -1
SEC61YLR378C VIK1Q12045 647 aa8.8□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 13.7 ms