RNA–Protein interactions for RNA: YLR175W

CBF5, Transcript of Pseudouridine synthase catalytic subunit of box H/ACA snoRNPs, yeastyeast

Gene CBF5, Length 1,452 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CBF5YLR175W SNO2P53823 222 aa4.43□□□□□ -1.7
CBF5YLR175W YNL260CP53846 198 aa4.43□□□□□ -1.7
CBF5YLR175W REX2P54964 269 aaKnown RBP4.43□□□□□ -1.7
CBF5YLR175W PRP38Q00723 242 aaPredicted RBP4.43□□□□□ -1.7
CBF5YLR175W ECM11Q04110 302 aa4.43□□□□□ -1.7
CBF5YLR175W YDR124WQ04608 324 aa4.43□□□□□ -1.7
CBF5YLR175W GGA1Q06336 557 aa4.43□□□□□ -1.7
CBF5YLR175W DIA2Q08496 732 aaPredicted RBP4.43□□□□□ -1.7
CBF5YLR175W YDR056CQ12025 205 aa4.43□□□□□ -1.7
CBF5YLR175W ATG29Q12092 213 aa4.43□□□□□ -1.7
CBF5YLR175W NSL1Q12143 216 aa4.43□□□□□ -1.7
CBF5YLR175W MSB2P32334 1306 aa4.43□□□□□ -1.7
CBF5YLR175W COX3P00420 269 aa4.42□□□□□ -1.7
CBF5YLR175W ATP6P00854 259 aa4.42□□□□□ -1.7
CBF5YLR175W TY1A-LR4P0C2I8 440 aaKnown RBP4.42□□□□□ -1.7
CBF5YLR175W TY1A-DR6P0CX70 440 aa4.42□□□□□ -1.7
CBF5YLR175W TY1A-ER1P0CX71 440 aa4.42□□□□□ -1.7
CBF5YLR175W TY1A-LR2P0CX72 440 aa4.42□□□□□ -1.7
CBF5YLR175W TY1A-PLP0CX73 440 aa4.42□□□□□ -1.7
CBF5YLR175W TY1A-JR1P0CX74 440 aa4.42□□□□□ -1.7
CBF5YLR175W TY1A-LR3P0CX75 440 aa4.42□□□□□ -1.7
CBF5YLR175W TY1A-ML2P0CX76 440 aa4.42□□□□□ -1.7
CBF5YLR175W PDC5P16467 563 aaKnown RBP4.42□□□□□ -1.7
CBF5YLR175W GFD2P25370 566 aaKnown RBP4.42□□□□□ -1.7
CBF5YLR175W DGR2P32330 852 aa4.42□□□□□ -1.7
CBF5YLR175W STE14P32584 239 aa4.42□□□□□ -1.7
CBF5YLR175W PTC1P35182 281 aa4.42□□□□□ -1.7
CBF5YLR175W SEC27P41811 889 aaKnown RBP4.42□□□□□ -1.7
CBF5YLR175W PFA3P42836 336 aa4.42□□□□□ -1.7
CBF5YLR175W SLS1P42900 643 aa4.42□□□□□ -1.7
CBF5YLR175W YGL176CP46945 554 aa4.42□□□□□ -1.7
CBF5YLR175W YPT32P51996 222 aaKnown RBP4.42□□□□□ -1.7
CBF5YLR175W MPS1P54199 764 aa4.42□□□□□ -1.7
CBF5YLR175W PRO2P54885 456 aaKnown RBP4.42□□□□□ -1.7
CBF5YLR175W SDH1Q00711 640 aa4.42□□□□□ -1.7
CBF5YLR175W IRC15Q02733 499 aa4.42□□□□□ -1.7
CBF5YLR175W MMT1Q03218 510 aa4.42□□□□□ -1.7
CBF5YLR175W YET2Q04210 160 aa4.42□□□□□ -1.7
CBF5YLR175W GPN2Q08726 347 aaPredicted RBP4.42□□□□□ -1.7
CBF5YLR175W TY1A-GR1Q12085 440 aa4.42□□□□□ -1.7
CBF5YLR175W SUL2Q12325 893 aa4.42□□□□□ -1.7
CBF5YLR175W MHT1Q12525 324 aa4.42□□□□□ -1.7
CBF5YLR175W TY1A-PR3Q6Q5H1 440 aaKnown RBP4.42□□□□□ -1.7
CBF5YLR175W TY1A-OLQ92392 440 aaKnown RBP4.42□□□□□ -1.7
CBF5YLR175W GPM1P00950 247 aaKnown RBP4.41□□□□□ -1.7
CBF5YLR175W MRP13P12686 339 aa4.41□□□□□ -1.7
CBF5YLR175W PHO81P17442 1178 aa4.41□□□□□ -1.7
CBF5YLR175W CSM1P25651 190 aa4.41□□□□□ -1.7
CBF5YLR175W SBA1P28707 216 aaKnown RBP4.41□□□□□ -1.7
CBF5YLR175W HXT4P32467 576 aa4.41□□□□□ -1.7
CBF5YLR175W MGM101P32787 269 aaKnown RBP4.41□□□□□ -1.7
CBF5YLR175W YCR087C-AP37263 153 aa4.41□□□□□ -1.7
CBF5YLR175W YBL029WP38201 376 aa4.41□□□□□ -1.7
CBF5YLR175W MUM2P38236 366 aa4.41□□□□□ -1.7
CBF5YLR175W DED81P38707 554 aaKnown RBP4.41□□□□□ -1.7
CBF5YLR175W INM1P38710 295 aa4.41□□□□□ -1.7
CBF5YLR175W GGC1P38988 300 aa4.41□□□□□ -1.7
CBF5YLR175W HXT6P39003 570 aaKnown RBP4.41□□□□□ -1.7
CBF5YLR175W HXT7P39004 570 aa4.41□□□□□ -1.7
CBF5YLR175W GIP4P39732 760 aa4.41□□□□□ -1.7
CBF5YLR175W TIM54P47045 478 aa4.41□□□□□ -1.7
CBF5YLR175W MPS3P47069 682 aa4.41□□□□□ -1.7
CBF5YLR175W GCV1P48015 400 aa4.41□□□□□ -1.7
CBF5YLR175W GTO1P48239 356 aa4.41□□□□□ -1.7
CBF5YLR175W DIA3P52290 468 aa4.41□□□□□ -1.7
CBF5YLR175W COS12P53053 380 aa4.41□□□□□ -1.7
CBF5YLR175W COG2P53271 262 aa4.41□□□□□ -1.7
CBF5YLR175W ARC35P53731 342 aaKnown RBP4.41□□□□□ -1.7
CBF5YLR175W ECM9Q02202 377 aa4.41□□□□□ -1.7
CBF5YLR175W RPM2Q02773 1202 aa4.41□□□□□ -1.7
CBF5YLR175W ROT1Q03691 256 aa4.41□□□□□ -1.7
CBF5YLR175W YML053CQ04978 212 aa4.41□□□□□ -1.7
CBF5YLR175W YPL245WQ12179 454 aaKnown RBP4.41□□□□□ -1.7
CBF5YLR175W YCL012CQ8J0M4 134 aa4.41□□□□□ -1.7
CBF5YLR175W TY4B-PA0A0B7P3V8 1104 aa4.4□□□□□ -1.71
CBF5YLR175W ATP2P00830 511 aaKnown RBP4.4□□□□□ -1.71
CBF5YLR175W NAR1P23503 491 aaKnown RBP4.4□□□□□ -1.71
CBF5YLR175W SPS22P25380 463 aa4.4□□□□□ -1.71
CBF5YLR175W SYP1P25623 870 aaKnown RBP4.4□□□□□ -1.71
CBF5YLR175W MKK2P32491 506 aa4.4□□□□□ -1.71
CBF5YLR175W DEF1P35732 738 aaKnown RBP4.4□□□□□ -1.71
CBF5YLR175W EMC3P36039 253 aa4.4□□□□□ -1.71
CBF5YLR175W TRM7P38238 310 aaKnown RBP4.4□□□□□ -1.71
CBF5YLR175W IST2P38250 946 aa4.4□□□□□ -1.71
CBF5YLR175W TRM5P38793 499 aa4.4□□□□□ -1.71
CBF5YLR175W YAL037WP39728 267 aa4.4□□□□□ -1.71
CBF5YLR175W TIF34P40217 347 aaKnown RBP4.4□□□□□ -1.71
CBF5YLR175W JEM1P40358 645 aa4.4□□□□□ -1.71
CBF5YLR175W AYR1P40471 297 aa4.4□□□□□ -1.71
CBF5YLR175W YIL108WP40483 696 aaKnown RBP4.4□□□□□ -1.71
CBF5YLR175W IMA5P40884 581 aa4.4□□□□□ -1.71
CBF5YLR175W SSU1P41930 458 aa4.4□□□□□ -1.71
CBF5YLR175W YFR020WP43600 232 aa4.4□□□□□ -1.71
CBF5YLR175W PTR3P43606 678 aa4.4□□□□□ -1.71
CBF5YLR175W IDP3P53982 420 aaKnown RBP4.4□□□□□ -1.71
CBF5YLR175W AAT1Q01802 451 aa4.4□□□□□ -1.71
CBF5YLR175W GIP3Q03016 1276 aa4.4□□□□□ -1.71
CBF5YLR175W EFR3Q03653 782 aaKnown RBP4.4□□□□□ -1.71
CBF5YLR175W TRM82Q03774 444 aa4.4□□□□□ -1.71
CBF5YLR175W MUS81Q04149 632 aaPredicted RBP4.4□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 22.2 ms